Pangasianodon hypophthalmus (striped catfish): 113524958
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Entry
113524958 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113524958 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113524958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113524958
Membrane trafficking [BR:
phyp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113524958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
113524958
NCBI-ProteinID:
XP_026767159
LinkDB
All DBs
Position
Unknown
AA seq
3000 aa
AA seq
DB search
MTEEYFETRSWNSDTFSDCAGDHRSFSKHSPGLRKQDSEGQHAVVDGPQMNTDGEELMVP
LGSECSLMNLDSDLGCAVLEETGFSSLSRTCVFDTPKDSQLFTTSEELMVQVEDSCSAEI
LDDSGCDGAANRSSSEEAGLPSILQSNTASKGLTDSDLVVASRDLVDISSSKCLRKLDSS
YSERKNDVLEINTGEEQLMALLANDSSVMISDDSGHHSSLEIMSEEAGLPSISQVTSEET
LTLTDRSEVAHQLEQTPDLSTDHGNLSSPKSTPDLRNLDSGCDEVLNGSSLQEAGLPSIS
QASVSVQNLIDSQLFTIPKEKPEMIYRRTSAPELNNTSDFTVASSHGDHGIFPSPKSSPD
LRNLDSSYSEGKNNGLEMSMDGEQLMVPLANECSVVTSDDVENAEIVNRLSPEEAGLPSI
SQASMSNTDSINSQLFTVFTQTLRLTDRSESEPQSENISDLDHVDFSSPKHFTDLRNLDS
SHSERKSDGLEMKEEGEELMKPLIGSSNAIILDDSECDEVLNGSSLEEAGLSSISQASVS
SKNLTDSQLLTPSKETLTLSDRCEAAPQLDNAPDLDITNISSPKHSPVLASMESSQTEEK
IDGLEMNMDVEQLMEPLAKECSVIILDDNAADGSSIKIFSKEAGLPSISEACISNPDLME
SQFFPTSVETPELTYRSEAAPRLENISNLVVANKDKMDYCSPKCSPDPRNLENLESSHSE
MKNDGQQMNSDGVQHKVQLENSAEEVSAVILDDSGDDEAANWSSLEEAVLPSILHSNTAS
KDLTDSELFTTEDTLTSTDQSDTVLQLDNTSESGVPSRDLVECSSPDHRNLDLSHLEIKN
DSVQLKTDTDELVVPLRANCYAVILDHLSCDEIVNPSLLEILSKEAGLPFISQASMSDTD
LITDQTEAVALLDNRSDLGAACKYQLDFPSSKSSPDLRNLDSSHSEGKNNGLEMSMDGEQ
LMVPLANECIVVTSDDLENAEIVNRLNPKEAGLPSISQASMSTTDSINSQLFTVFTQTLR
LTDRSEAEPQSENISDLNHVDISSPKHFTDLRNLNSSHSERKIDGLEMKVEGEELMEPLA
DGSNAIILDDSECDEVLNGSSLEEAGLSSISQASESDTISKNLTFEETHTLTDKREAPSQ
LGNSSNLDGSSTDHGNLPSPKSSPDFRNLNTSYSERNRTDKEELVVLLANDCNLVDDVES
AEIDHKLSPEEAGLFSQNDGLEKNKDGEELIVPLDSSAMVLDDSEQDEVLNRPSSEVAGL
LSIIQASMSNTNLISSQIFTTSKHTLAPPDGSEAEPYLENASDSTGASRNEEQSGNISKM
ENPTVSEMSLVSQIMINTNKVEPLGQIYEAGVKPSEVNSNIFVDSLMDICPCDSSRLQPE
GVTSIQKDQGQFSIPNIIKENLLESSAIKDCDYYSVEEGSSSPLYANSFISESNVPMDDE
QTLDLDLDIDQTERRSNDLDDLVNLQFLNTCSVKEFTAIPQKEQEVIYSDNSGYIDSYVM
MSPPGKESQSVTLEHQSVQDSYVGQLPVPVEVFFKESTPSDSVSVTKFTKQVLQGNQAKV
EKVCAKEHEVSISYDDYCMQDKSVLKTSLRFDAHHGSDTNNNTKQHTSETPCTLRSSPLE
QELWNHMNPSLQDGPSNLSNNSASFFEMMDYKRDVLNPLDVEDASQGKTYGKDCQLEENK
EIMADPTIYPITDAHHGLIPSNCQSSKFSQASPVDGPKCQKIHREQSLLPHSDSISVTNG
LGNDESGKAPFCPDSLQYKSYPFIDVSIGTLSDLEPIMESEHPQESSDSSEGEQKDGTSS
VNENECSPLQRDENDALYNVRSMKGYFDKPEDEDSTTRLTNGYDGNEDIPNSASPDQDFI
TTNSEEVDDLSHGPRGSSSNSPGSNQNSLKNKETKSMSAGKSSRFSRFTRISSFRKSKRE
SKDGNKVEPETKLSPEVGEERNQTPNHNPTTDHLTNYEDQSSDDVFGKALGVTWNGQSGS
TSSSKNMQQHNKYSERVQIKPVLDPQKKSKSSDNFRMKLALAQRSLSSFFEIRTGDKDNQ
QDSNMLSQDTKSKQPWKKMKMTKEAEMLKRTLSLPGPSGAKSRRRLQSDFVSGLTEDCPD
LQGFQSSKEDLKSTSHPDASVSGPEAEPAERKTLSKCFESVQSYENISETLIHPTVFALA
NQLSPSWTRSLGSFEGLDTPTRPMTPKPQNPGVWSHRSSFRYPSKSVATSLCSLGEGSSL
EGLSERSQRRTEQREARIAPAQSFDSEYLLEDSNSDNQSQTSLVSTNSATESEPSQDVSK
SSLQSSSSVLRVRRSDQRAVRPRPLSDLCSWSLPLREIGETVVDPIQEQNVTENWKAKAQ
KRSCSDELLGEFQKMQKMKVMMQRSLGTLSTTSEEQQKVRMRLPFTSSQQLSSMSFKDHF
FSQSTPTGLDCLHWPRPVSFSESCLIRPSEHTLRQPAALALVITDGPQDKSGLGDEVGSE
DELYNDFHISANRLGGGEQLAINELISDGSVCAEALWDHVTMDDQELGFKAGDVIEVVDA
TNKEWWWGRVQESEGWFPASFVRLRVNQDEPLEDDVVQGAVESGGAGVGGSCGPGLPCKE
QMRANVINEIMSTERDYIKHLKDICEGYIKQCRKRTDMFTEEQLRTIFGNIDELYRFQKK
FLKALEKKYNKEQPHLSEIGSCFLENQTDFQIYSEYCNNHPNACVQLSKLMKMKKYVFFF
EACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQHRDYKDVEAALNAMKNVA
RLINERKRRLENIDKIAQWQSSIEDWEGEDVLSRSSDLIFSGDLTKISQPQAKGQQRMFF
LFDHQLVFCKKDLLRRDILYYKGRLDMDQMEVVDVEDGKDKDLNVTVKNALKLISPDGAE
IHLLCAKKPELKQRWLRAFADERQQVQHDRDTGFSITDVQKKQAMQNVSKNPPAGKPKAL
HHLLALKAPLLRSKSSKCLHYPESPGPAFSSSPLPEVIAPPGVLRRAISWVSSQSRDLLR
NT seq
9003 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagtattttgagactcgctcgtggaacagcgacactttctcagattgtgct
ggagatcataggagcttctctaaacactcccctggcctcagaaagcaggactcagaaggt
cagcatgcagttgttgatggtccacagatgaacacagatggagaggaactcatggtacca
ttgggaagtgagtgcagcttgatgaatttggactcggatttaggatgtgcagttcttgag
gaaactggattttcttctctctcacgtacttgcgtgtttgacacaccaaaagactcgcaa
cttttcacaacttctgaagaactcatggtacaagtagaagacagctgcagtgcagagatt
ttagatgattcagggtgtgatggagctgcaaatcggtcgtcatctgaggaagctggactt
ccgtccatcctgcagtccaacacagcatcaaaagggttgacagattcagatttagttgtt
gcaagcagagatcttgtggatatttcatcttctaaatgcctcagaaagctggactcttct
tattcagaaagaaagaatgatgttcttgagattaacactggtgaagagcaactcatggca
ctattagcgaatgactccagtgtaatgatttcagatgattcagggcatcattcatcactt
gagatcatgtcagaggaagctggacttccttccatttctcaggttacgtctgaagaaaca
cttacactgactgacagaagcgaagtagcacatcagttagaacaaactcctgatttaagc
acagatcatgggaacctttcttctcctaaaagcactcctgacctcagaaatcttgattca
gggtgcgatgaagttctaaatggttcatctcttcaggaagctggacttccttccatctct
caggctagtgtatctgtccaaaatttgatagattcccaacttttcacaattcccaaagag
aaacctgaaatgatctacagacgtacatcagcaccagagttaaacaacacttcagatttc
actgttgcaagcagtcacggagatcatgggatctttccttctcctaaaagctctcctgac
ctcagaaatctggactcttcttactcagaaggaaagaacaatggtctggagatgagcatg
gatggagagcagctcatggtaccactggctaatgagtgcagtgtagtaacttcagatgat
gtagagaatgcagaaattgttaatcgattatctcctgaggaagctggacttccttccatt
tctcaagctagcatgtccaacacagattcaatcaattcacaacttttcacagtgtttaca
cagacactaagactcactgaccgaagtgaatcagaaccccaatcagaaaacatttctgat
ttagaccatgtggacttttcttctcctaaacactttactgacctcagaaacctggactct
tctcattcagaaagaaagagtgatggtctggagatgaaagaggaaggagaggaactcatg
aaacccctgataggtagctccaatgcaattattctagatgattcagagtgtgatgaagtt
ttaaatggttcatctcttgaggaagctggactttcttccatctcacaagctagcgtgtca
tcaaaaaacttgacagattcacaacttttgacaccttctaaagagacacttacactgagt
gacagatgtgaagcagcacctcagttagacaacgctccagatttagatattacaaacatt
tcttctcctaaacactctcctgtccttgcaagcatggagtcttctcaaacagaagaaaag
atcgatggtctggagatgaacatggatgtagagcaactcatggaaccattggcaaaggag
tgcagtgtgattattcttgatgataatgctgctgatggttcatctattaagatcttctcc
aaggaagctggactaccttccatctctgaggcttgcatatccaacccagatttgatggag
tcacaattttttccaacttccgtagagacacctgagctcacctacagaagtgaagcagct
ccccggttagaaaacatttcaaatttagttgttgcaaacaaagataaaatggattattgt
tctcctaaatgttctcctgatcccagaaacctggaaaacctggagtcatctcattcagaa
atgaagaatgatggtcagcagatgaacagtgatggagtgcaacacaaagtgcaattggaa
aacagtgcagaagaggtcagtgcagtgattttagatgattcaggagatgatgaagctgca
aattggtcatctcttgaggaagctgtacttccttccatcttgcacagcaacacagcatca
aaagacttgacagattcagaactttttacaactgaagatacacttacatctactgaccaa
agtgacacagtgctccagttagacaacacatcagaatcaggtgttccaagcagagatctt
gtagaatgttcttctcctgaccacagaaatctggatttatctcatttagaaataaagaat
gatagtgttcaattaaaaacagacacagatgaactcgtagtaccattgagagccaactgc
tatgcagtgattttagatcatttatcctgtgatgaaattgtgaatccatcattgctcgag
atcttgtccaaggaagctggacttcccttcatctcccaggccagcatgtctgatacagat
ttaattactgaccaaacagaagctgtggccctgctagacaacagatccgatctaggtgct
gcatgtaaatatcaacttgattttccttcttctaaaagctctcctgacctcagaaatctg
gattcttctcattcagaaggaaagaacaatggtctggagatgagcatggatggagagcag
ctcatggtaccactggctaacgagtgcattgtagtaacttcagatgatctagagaatgca
gaaattgttaatcgattaaatcctaaggaagctggacttccttccatttctcaagctagc
atgtccaccacagattcaatcaattcacaacttttcacagtgtttacacagacactaaga
ctcactgaccgaagtgaagcagaaccccaatcagaaaacatttctgatttaaaccatgtg
gacatttcttctcctaaacactttactgacctcagaaacctgaactcttctcattcagaa
agaaagattgatggtctggagatgaaagtggaaggagaagaactcatggaacccctggca
gatggctccaatgcaattattctagatgattcagagtgtgatgaagttttaaatggttca
tctcttgaggaagctggactttcttctatctcacaagctagcgagtctgatacaatatca
aaaaacctgacttttgaggagacacatacactgacagacaaaagggaagcaccatctcag
ttaggcaacagttctaatttagatggttcgagcacagatcatgggaacttaccttctcct
aaaagctctcctgacttcagaaatcttaacacgtcttattctgaaagaaatagaactgat
aaagaggaactcgtggtactactggcaaatgactgcaatttagtagatgatgtagagagt
gcagaaattgatcataaattatctcctgaggaagctggacttttttcacagaacgatggt
ctggagaagaacaaagatggagaggagctcattgtacccctggactccagtgcaatggta
ttagatgattcagagcaggatgaagttctaaatcgtccttcttctgaggtagctggactt
ctttctatcatacaggctagcatgtccaacacaaatttgatcagttcacaaatttttaca
acttctaaacacactcttgcaccaccagatggaagtgaagcagagccttatttagagaat
gcatctgattcaactggtgcaagtagaaatgaagaacaatcaggtaatataagtaaaatg
gagaatcccactgtttctgaaatgtctttagtatcacaaataatgataaacacaaataag
gtagaacctctgggacagatttatgaagctggggtaaaaccttctgaggtcaatagtaac
atatttgtggattcattaatggacatatgtccttgtgacagctcaaggcttcaacctgaa
ggtgtaacatcaatccaaaaagatcagggacaattttcaattccaaacatcatcaaagag
aacttattagaaagttctgctattaaagactgtgattattattcagtagaggaaggttcc
tcaagtccactgtatgctaacagttttatttcagagtctaacgttccaatggacgatgaa
caaactttggatttggatttggacattgatcaaactgaaagacggtctaatgatttagat
gatttagtaaatttgcagtttctgaacacttgcagtgtgaaggaattcactgccataccc
cagaaagagcaggaggtcatttattcagataactcgggttatattgactcttatgtgatg
atgtctccacctggtaaagaatcacaaagtgttactctcgaacaccaaagtgttcaagac
agctatgtaggacaacttccagtcccagttgaggttttcttcaaggaatcgactccatca
gattctgttagcgtcaccaaattcaccaaacaggtcctgcaaggaaaccaggctaaagtt
gaaaaggtctgtgcaaaagagcatgaagttagtatttcatatgatgattattgtatgcag
gataagtctgtcttaaaaacctcactgcgttttgatgcacatcatggttcagacacgaac
aataacacaaagcaacacacatctgagacaccttgcactttacgtagttcaccactagaa
caggaactctggaatcatatgaatccatccttgcaagatggtccttcaaatttatcaaac
aattctgccagcttctttgaaatgatggattacaaaagggatgttttaaatccacttgat
gtagaagatgcttctcaggggaagacatatggaaaagattgccagttggaggaaaacaag
gaaatcatggcagatcctactatctatccaatcacagatgctcatcatggactgattcct
tccaattgtcaaagctccaagttttcacaagctagtcctgtagatggacctaaatgtcag
aagatccaccgagagcaaagcctgctgcctcactctgactcaatcagtgttaccaatggg
ttaggaaatgatgaatccggaaaagcacctttttgtccagattctcttcagtacaaaagt
tacccttttattgatgttagcattggtacactatcagatttggagcccattatggagtca
gaacaccctcaggagagctcagacagttcggagggagaacagaaagatggtacatcatct
gtgaatgagaacgaatgcagccctttacaaagggatgaaaatgatgcactatacaatgtc
aggtctatgaaaggatattttgataaaccagaagatgaagacagcactactcgtctgaca
aatgggtatgatggtaatgaggatattcccaattctgcatctccagatcaagactttatc
accacaaacagtgaagaagttgatgatctcagtcacggcccaaggggaagcagctccaac
tcccctggcagcaaccaaaactcattaaagaacaaggagaccaagagcatgtctgcaggg
aaaagctcaaggttctctaggttcacaagaatctcctccttccgcaaaagcaagagagag
tccaaggatggaaacaaggttgaacctgagacaaaactatctcctgaggttggagaggag
agaaatcagacacctaatcataatcctactacagatcacttgacaaactatgaggatcaa
tctagtgatgatgtctttgggaaagcccttggtgtaacttggaatggacaatccggatcc
acgtccagctccaagaatatgcaacaacataacaaatacagtgaacgagtgcaaattaaa
cctgtacttgatccccaaaagaagagcaagagcagcgataacttccgcatgaagcttgct
ctggctcagaggtctctgtcgagcttctttgagatcagaactggtgataaagacaaccaa
caggattccaacatgctgagccaggatacaaaatccaagcagccttggaagaagatgaaa
atgactaaggaggctgagatgctaaagagaactctgtctcttcctgggccaagtggtgcc
aagtccagacgtcgcctccagagtgactttgtgtctgggttaactgaggactgtccagat
cttcagggattccagagctccaaggaggatttgaaaagcacatcacaccctgacgcatca
gtgtctggacctgaggcggagcctgctgagaggaaaacactatctaagtgttttgagtct
gtccaaagttatgagaacatctcagagacactcatacaccctactgtttttgcacttgct
aatcagctatctccatcctggacaagatccctgggttcctttgaaggacttgatacgcca
actaggccaatgactcccaaaccacaaaatcctggggtttggagtcacagaagcagcttc
cgttacccctcaaaatccgtagccacctccttgtgctcgctgggtgagggttcgagtttg
gagggactgtcagaacgttcacagaggcggaccgagcaaagagaagcacgaattgcaccg
gctcagtcctttgattctgagtacttacttgaagacagcaactcggacaaccaatctcaa
accagcctggtgtccaccaactcagccactgagtctgagccttcacaggatgtcagtaaa
tcatctctccagtcatcttcctcggtgctccgtgtcagaagaagcgatcagcgtgcggtc
cgacccagacctctttccgacctctgcagctggagtttacctctcagggaaatcggagaa
acggtggttgatccgattcaggagcagaacgtcacagaaaattggaaggctaaggcacag
aagagatcgtgctcagatgagctgctcggggagttccagaagatgcagaagatgaaggtg
atgatgcagaggagccttgggacgctgagcacaacgtctgaggaacagcagaaagtgagg
atgagactgcccttcacttcttcacagcagttgtcctccatgtcttttaaagatcacttc
ttctcccagagcactccgactggactcgactgtctccactggccacgcccagtttcattc
tcagagtcgtgtctcattcgaccttcagagcacacgctcaggcagccggccgctctcgcg
ttggtgatcactgatggacctcaggataaatcgggtctgggtgatgaggtgggcagtgaa
gacgagctgtacaacgacttccacatttctgccaatcgcttaggaggaggagaacaactc
gctattaatgagctgatcagcgatggcagcgtgtgcgccgaggctttgtgggatcacgtc
accatggacgaccaggagctcggcttcaaggccggagacgtcatcgaggtggtggacgcc
accaataaagagtggtggtggggacgagtgcaggagagcgagggatggttccccgccagc
ttcgtccggctgcgtgtgaatcaggacgagccgctggaggatgatgtagtccagggcgcg
gtggagagcgggggtgcgggggtgggcgggtcgtgtgggcccgggttaccgtgtaaagag
cagatgagggcgaatgtgattaacgagatcatgagcacggagagagactacatcaaacac
ctgaaggacatctgtgagggctacattaaacagtgccgtaaacggaccgacatgttcaca
gaggagcagctcaggaccatcttcggcaacatcgacgaactttatcgcttccaaaagaaa
tttctcaaagcgctggagaaaaaatacaacaaagagcaaccacacctgagcgagatcggc
tcctgcttcctggagaaccaaacggattttcagatttactcggagtactgtaacaatcac
cccaacgcctgcgtccagctctccaagctgatgaagatgaagaagtacgtgtttttcttc
gaggcgtgtcgcctgctgcagaagatgatcgacatctcgctcgacggctttctgctcaca
cctgtgcagaagatctgcaaatatccactgcagctcgccgagctcctcaaatacaccaac
cctcagcaccgagattataaagacgtggaagctgctttaaacgcgatgaagaacgtggcg
cggctgatcaacgagaggaaacgccgtctggagaatatcgataaaatcgctcagtggcag
agctccatcgaggactgggagggcgaggacgttctgagtcggagctcggatctgattttc
tcaggagatttaaccaaaatctcacagcctcaggccaaaggtcaacagcgcatgttcttc
ctgtttgatcatcagctggtcttctgcaaaaaggatctgctccggagggacattttatat
tataaaggacgcctggacatggaccagatggaggtggtggatgtagaagacggaaaagat
aaagatctgaacgtgacggtgaagaacgcgctgaagttaatatctccagacggagcagag
attcatctcctgtgtgctaaaaaacccgagctgaagcagcgctggctccgagccttcgcc
gacgagagacagcaggtccaacacgaccgagacacgggattttccatcacagacgtgcag
aagaaacaggccatgcagaacgtgtcgaaaaatcctccagctggaaaacccaaagcgtta
caccacctgctggctcttaaagctccacttctacgctccaaaagctccaagtgccttcat
tacccagaatcccctgggcctgccttctcctcctccccccttcctgaagttatagcgccc
cctggtgtcctgcgcagggccatttcctgggtctcctctcagagtagagacctgctccga
tag
DBGET
integrated database retrieval system
