Pangasianodon hypophthalmus (striped catfish): 113525057
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Entry
113525057 CDS
T05759
Name
(RefSeq) stimulated by retinoic acid gene 6 protein-like isoform X1
KO
K23088
vitamin A receptor/transporter (stra6) family protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113525057
Transporters [BR:
phyp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
113525057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBP_receptor
Halogen_Hydrol
Motif
Other DBs
NCBI-GeneID:
113525057
NCBI-ProteinID:
XP_026767282
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MRISGGNTTEQSAGQSQEIPANPTDETDLWLQCNTFYELFMPLSLLVSVFIILLLSFVER
RKKIWDCERRFSCLSGRFGFVVPLDFTGKMQNRWSYGFAFGAVTPFVINLMFNSIIRANV
PPYLQVLVALLTALVLSIVCMPLFACLSTPHRLLGGVLGLLYSLSWFVALMWKLIWCRAI
APNDNFVGYLLWSVWLFNVPQLLCLGFLVCRFGSIIVKGVQNRLRNYSKQEEVEKHEYKY
VQRLLRWPAEASVQKSWFQREVYEWDPYFKFPNRIIATVVLSFFGVYMIVTSEQIISWWL
TSNMYAIWKKYLKHILDQTSFFTHLNYVTYTWYISAACATLTSVIHISQVLVYYRKHMES
LRAGEKKYLPKTYKLDPVYGVVGLLKYPGYQIAFSVWGYLIMHIAMFVVGLVFVYLVVSP
IREHGFLHWLKWVGMSLPNFFILLAVMGLQRMLSHLFFLQDKTSPTDEDKPLALNNRKAF
HNFNYYLFFCNVILGVMSCFLRLIKSAAVGLMLLSRIERTIMPEGFEKQDTSYCMWVGMI
MADHYHTNPVLVCFCHLLLKHTSESVQDGEYSRLNSEPISKDRVRTRWLLVYTLLRNPKL
ILLRKKRKQKNDKEGELAFAWAISNKA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttctggcggaaacactacagagcaaagcgccgggcagagccaggaaattcca
gccaaccccacggatgaaacagatttatggctgcaatgtaacactttttatgagctcttt
atgccgctgagtctgctggtgtctgtgtttattatactcctgctgtcgtttgtagagcgc
aggaagaagatttgggactgtgagaggagattctcgtgtctgagcggccgattcggcttc
gtggtacccctggacttcacaggcaagatgcagaaccgatggtcttacggtttcgccttc
ggtgccgtgacccccttcgtgatcaatctgatgttcaacagcatcataagagctaatgtg
ccaccctatctacaagttttggtggctctgttaactgcgttggttctaagcattgtctgc
atgccgttattcgcctgtctttcaacaccacaccggttgcttggaggagtcctggggctg
ctgtattcactctcctggttcgttgcactgatgtggaagttgatctggtgcagagcaata
gcaccaaatgataatttcgtgggttatttattgtggtcagtttggttatttaatgtccca
cagttactgtgcttggggttcctggtgtgccgctttggctccatcatagtgaagggtgtg
cagaaccgcctgaggaattacagcaagcaggaggaagtggagaagcacgagtacaaatac
gtacaacgtttactgagatggcctgctgaagcgtccgtgcagaagagctggttccagagg
gaagtgtacgaatgggatccgtattttaaattcccaaacagaatcatcgccaccgtcgtg
ctgtcctttttcggagtgtacatgatagtaacatcagagcagatcatttcttggtggttg
acctcaaacatgtatgcaatttggaagaagtatttaaaacatatattggatcaaacatcc
tttttcacacacctgaactatgtcacatacacctggtatatctcagcagcttgtgccacg
ctgacgtctgtcattcacattagccaggtgttggtgtattacaggaagcacatggaatca
ttgcgagctggagaaaaaaaatacttgccaaagacgtacaaactggaccctgtgtatgga
gtggtggggcttttgaagtatcctggctatcagatcgctttctccgtgtggggttatctg
atcatgcacatagcgatgttcgtggttggcctggtgtttgtatacctggtcgtatcaccg
atccgggaacacggatttctccactggctgaagtgggtgggcatgagtctgccgaatttc
ttcatcttattggctgtgatggggctgcagcgcatgctgagccatctatttttcctgcaa
gacaaaacctcacctacggatgaagacaagccgttagcactcaacaacaggaaggccttc
cacaactttaactactacctcttcttctgtaacgtgatcttgggcgtgatgagctgcttt
ttgcggttaattaaaagtgccgctgtgggtctgatgttgctatcgcgcatcgagcggacc
ataatgccagagggcttcgagaagcaggacacgagttactgtatgtgggtgggaatgata
atggcagatcattatcacactaatccagttctggtgtgtttctgccacctgctgctcaaa
cacacttcagagagtgtccaagacggcgaatattcgcgcttaaactcagagcctatatca
aaggaccgagttcgcactcgctggcttctcgtgtacaccctactgaggaaccctaaactc
atcctgctgaggaagaaacgcaagcaaaaaaacgacaaagagggtgaactcgcctttgcc
tgggccatctcaaataaagcataa
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