Pangasianodon hypophthalmus (striped catfish): 113525170
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Entry
113525170 CDS
T05759
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113525170
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113525170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
Motif
Other DBs
NCBI-GeneID:
113525170
NCBI-ProteinID:
XP_026767437
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MTLGHSLSYYSPSSLFSSSSSSTSSSPVARGSIRKNRKFRSTKGASKARRDLINAEIRKL
RALLPISAEERERLSYLHAMSVICTFIRKSVLLARKTFHPIYSDGVCVAGGDEGVTPACE
DQLNALPGFLVAMTSEGKLLYVSENVSHYLGLSMVEVLQGDTFYSMITNIDTEKVKFYLQ
HKNLNTERSCVCVFRTNRQCCPLLVRMRVFDPQRGLVVALCSPSLRERDSFTTTHTPDMR
YTHTHYSVVLHLGYEAEELIGQSWYSIIHPDDLLLSARGHKQLMHCEQVDFVLRVQDKQL
NWVWLYIIATRHTQSHMITCTNYIISEVVAEDLRHKLSTVSSVSSPSLSPPGSQNSQRST
KRPAEGSAESRRRKNRRVSTAASSSLPYSPNSSFSSPAQEVGNIDLLFSSSAFCPFYTSP
SQNFQWPNFDSTPLTPPPFCYPSEVSVPDDHAELPGSLSDSFLYLEDFNSFPSSATGNDR
TFNAPEDYGWSSLQTPPPPPLHYSEMEQVEISVLAQQISSLASSFDSYCTKSSVHRSDLA
PGLQFCDPEAFLLDEEVIDSVMQVPRATLEVQALEALLDLERCSEEQQHEFSLYSHTQQD
GFSDESLY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcggacactcattatcctattattcaccttcatccttattttcatcatcatca
tcatccacctcgtcctctccagtcgcacgcggctccatcaggaagaaccggaagttccgg
tccactaaaggtgcttcgaaagcgcggcgtgatttgattaatgcagaaatccggaagctg
cgcgcgctgctgccgatcagcgccgaggagcgcgagcgtctctcctacctgcacgcgatg
tccgtcatctgcacgttcatccggaaatccgtgctgctcgcgcgtaagacctttcacccg
atctacagtgatggagtgtgtgtcgccggtggtgatgaaggtgtgactcctgcatgtgaa
gatcagctaaacgcacttcctggttttttggttgcgatgacgagcgaggggaaattactg
tacgtctcagagaacgtgtctcactacctcggcctttccatggtggaggttctgcaggga
gacacattttacagcatgatcaccaacattgacacagaaaaagtcaagttctacctgcag
cacaagaacctaaacacagagaggagctgtgtgtgtgtgttcaggactaatagacagtgc
tgccccctgctggtcaggatgcgtgtgttcgaccctcagcggggcctcgtcgtggctctg
tgttcaccttcactgagagagagagacagctttaccaccacacacacaccagacatgaga
tacacacacacacactacagtgtggtgttacatttgggttatgaggcagaggagctgatt
ggtcagtcctggtacagcatcatccatcctgatgacctgttactgagtgccagaggacac
aaacaactgatgcactgtgagcaggtagactttgtgctgcgagtgcaggataaacagctg
aactgggtctggctttacatcattgccaccagacacacacagagtcacatgatcacctgc
accaattacatcatcagtgaagtcgtggctgaggatctgagacacaaactcagcactgtg
tcgtccgtttcttctccgtccctcagtcctccaggatcccagaattcccagcgctccacc
aagagaccagcagagggcagcgctgagagcaggagaaggaaaaacagacgagtgtctaca
gcagcgtcttcttctcttccctacagccctaattcctccttctcttctccagcacaggaa
gttggcaatatagacttgctgttcagctcttcagcgttttgcccattttacacctccccc
tctcagaacttccagtggcccaactttgactccaccccactgactccgcccccattctgt
tacccttccgaggtcagtgttcccgatgaccatgcagaacttcctggcagcttgtcagac
agtttcctgtacctggaggacttcaattcatttccttcatcagcaacaggaaatgataga
acattcaatgccccagaggattatgggtggtcaagtctgcagactccgccgccacctcct
ctacattacagtgagatggagcaggttgagatcagtgtccttgctcagcagatctcctct
ctggccagcagctttgattcgtactgtactaaaagctccgtccatcgatctgacctcgcc
cctggtttgcagttttgtgaccctgaggccttcctgttggatgaggaagtgattgacagt
gtaatgcaggttcccagggctacactggaggttcaggctcttgaggctctgctggattta
gaaaggtgctcagaggaacaacaacatgagttcagcctttattcacacacacagcaagat
gggtttagtgatgaatccctgtattaa
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