KEGG   Pangasianodon hypophthalmus (striped catfish): 113525174
Entry
113525174         CDS       T05759                                 
Name
(RefSeq) alpha-actinin-1-like
  KO
K05699  actinin alpha 1/4
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510  Focal adhesion
phyp04517  IgSF CAM signaling
phyp04518  Integrin signaling
phyp04519  Cadherin signaling
phyp04520  Adherens junction
phyp04530  Tight junction
phyp04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    113525174
   04518 Integrin signaling
    113525174
   04519 Cadherin signaling
    113525174
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113525174
   04520 Adherens junction
    113525174
   04530 Tight junction
    113525174
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    113525174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113525174
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:phyp04812]
    113525174
   04147 Exosome [BR:phyp04147]
    113525174
Membrane trafficking [BR:phyp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    113525174
Cytoskeleton proteins [BR:phyp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     113525174
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   113525174
  Exosomal proteins of colorectal cancer cells
   113525174
  Exosomal proteins of bladder cancer cells
   113525174
SSDB
Motif
Pfam: Spectrin EFhand_Ca_insen CH EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI Uds1 FAZ1_C
Other DBs
NCBI-GeneID: 113525174
NCBI-ProteinID: XP_026767443
LinkDB
Position
Unknown
AA seq 953 aa
MDHHPHPHQHYDGETNEYMQQEEDWDRDLLLDPAWEKQQRKVRHTHTDRARDRQLMFVLM
LLFVLMLLFVFTLLEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTA
PYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIP
KMLDAEGKMCFRGYQRVLCVPQAETAANRICKVLAVNQENEQLMEDYEKLASDVSVALHL
YHFTPSLYHFTPSLYHFTPSLSHITPFLYHFTPSLYHFTPSLYHFTPSLSHITPSLYHFT
PSLYHFTPSLYHFTPTLYHFTPSLSHITPFLYHFTPSLSHITPFLYHFTPTLYHSTPSLY
HFTPSLYHISASLYHTVSHPHPLSTHYSHNINCEKTHKHLKDISNAWGCLEGAEKGYEEW
LLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEAMLNQKDYETASLSEIKALLKKHEAFE
SDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDALGVLTQKRSEALQKTE
KLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLSTAHEQFKATLPEA
DKERQAILGIHNEITKIVQTYHVNIAGTNPYTTINPQEINTKWEKVRQLVPQRDQALIEE
HARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNY
KPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEIENQILTRDAK
GISQEQLSEFRASFNHFDRDHSGTLGAEEFRACLISLGFDIGNDAQKRTGLMDGEDFRTC
LISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKVLAGD
KNYITAEELRRELPPDQAEYCISRMAPYRGSDAVPGALDYMSFSTALYGESDL
NT seq 2862 nt   +upstreamnt  +downstreamnt
atggaccatcatcctcatcctcatcagcattatgacggagagacgaacgagtacatgcag
caggaggaggactgggacagagacctgctgctggaccccgcctgggaaaaacagcagagg
aaggtaagacacactcacacagacagagcgagagacagacagttgatgtttgtgttgatg
ttgttgtttgtgttgatgttgttgtttgtgtttactctgttagagattgttgatgggaac
gctaagatgactctgggaatgatctggaccatcatcctccgcttcgccatccaggacatt
tcagtggaggagacttcggccaaagaaggactcctgctttggtgtcagagaaaaacagct
ccttacaaaaacgtcaacatccagaacttccacatcagctggaaggatggtttgggattc
tgtgctctcattcatcgacatcgtccagaactcatagattacggcaaactgcgcaaggat
gaccctatgaccaacctgaacactgcgtttgatgtggcagagaaataccttgacatccct
aagatgcttgatgcagagggtaagatgtgttttaggggatatcagcgtgtgctctgtgtc
ccgcaggcggagacggcggccaatcgcatctgtaaagttctcgctgtcaatcaggagaac
gagcagctgatggaggactacgagaaactcgccagcgacgtgagtgtcgctctacacctc
tatcacttcactccatccctctatcacttcactccatccctctatcacttcactccatcc
ctctctcacatcactccatttctctatcacttcactccatccctctatcacttcactcca
tccctctatcacttcactccatccctctctcacatcactccatccctctatcacttcact
ccatccctctatcacttcactccatccctctatcacttcactccaaccctctatcacttc
actccatccctctctcacatcactccatttctctatcacttcactccatccctctctcac
atcactccatttctctatcacttcactccaaccctctatcactctactccatccctctat
cacttcactccatccctctatcacatcagtgcatccctctatcacaccgtctcacaccct
catccactctccactcactacagtcataacatcaattgtgagaaaactcataaacacctg
aaagatatctctaatgcatgggggtgtctggagggggcggagaaaggctatgaggagtgg
ctgctgaatgaaatccgccgactggagagactcgaccacctcgctgagaaattccgacag
aaagcagctatacatgaggcctggacagaaggtaaggaggccatgttgaatcagaaggac
tatgagacagcgtctctgtctgagattaaagctctgctgaagaaacacgaggcgtttgag
agtgacctcgctgctcaccaggaccgtgtggagcagatcgccgccatcgcccaggagctc
aatgagttggattattatgactctcccagtgtgaacgctcgctgtcagaagatctgtgat
cagtgggacgctctcggagttctgactcagaaacgcagtgaggccttacagaaaacggag
aagctgttggagacgatcgatcagctgtacctggagtttgccaagagggcggcgccattt
aataactggatggagggagcgatggaggacctgcaggacaccttcatcgtccacaccatc
gaggagatccagggcctgagcacggctcacgagcagtttaaagccacgctcccggaggcg
gataaggagagacaggccattctgggaatccacaacgagatcactaaaatcgtccaaacc
taccacgtcaacatagcgggaacgaatccctacaccaccatcaacccccaggagatcaac
accaagtgggagaaggtgagacagttggttcctcagagagaccaggcgctgatcgaggaa
cacgctcggcagcagaacaacgagcgtctgcgcagacagttcgctaatcaggctaacgtc
atcggaccctggatccagaccaagatggaggagatcggccgtatctccatcgagatgcac
ggtacgctggaggatcagctgaatcacctgcgtcagtacgagaagagcatcgtcaactac
aagccaaagatcgatcagctggagggagatcaccaacagatccaggaggcgctcatcttc
gacaacaaacacaccaactacaccatggagcacatccgtgtgggatgggagcagctcctc
accaccatcgctcgcaccatcaacgagatcgagaaccagattctgactcgcgacgctaaa
ggcatcagtcaggagcagctcagtgaattcagagcctcgtttaaccactttgaccgggat
cactcaggcactctgggcgctgaggagttcagagcgtgtctcatcagtctgggcttcgat
atcggaaacgacgctcagaagagaacaggcttgatggatggagaggatttccgcacctgt
ctcatctccatgggttataacatgggggaggcggagtttgcacgcatcatgagcatcgtg
gatcctaacaggcttggggtcgtgacctttcaggctttcattgacttcatgtctcgagaa
acagcagacacggacacagcggatcaggtcatggcctcttttaaagtgctggctggagac
aagaactacatcacggcggaggagctgaggcgtgagctgccccctgaccaggcggagtac
tgtatctcccgcatggcgccctacagaggcagcgacgccgtgcccggggctctcgactac
atgtccttctccactgccctgtacggagagagcgacctctga

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