Pangasianodon hypophthalmus (striped catfish): 113525199
Help
Entry
113525199 CDS
T05759
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113525199 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113525199 (rev3l)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113525199 (rev3l)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
113525199 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4683
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
113525199
NCBI-ProteinID:
XP_026767469
LinkDB
All DBs
Position
Unknown
AA seq
2104 aa
AA seq
DB search
MPPANHRASGRGFVRTQSDIVADDDEDGYDDEDDDLPDLSLHPDDLSPDDPPLVPASQVD
VHKDTATDNKRSDGKAAEVAVVDEEAILSLLESSQTFLPMSQKSNSSLILDNSQDLAMVD
FLEGLADHRFQKDVPITAPRQELSESLRCPYNSDEEEAVPELEKEEAELSMMMSQRWDTD
IPEPSARRLVKETNESSTEEEHELSEEEMDWSGNNTLFANLSIPQLDGAADENSDSSLSD
KGSRTHSSLTANDKMLGRKNRFQSETVHLEPPSSAKILLECKHPEHRQSLSLDKEEPADK
SLPDKSQEASEPLTGLKVNKDIPYIPPVKHPILSNVSQIGADRVGGHLLHTIENKAVGVN
QPDPESLSFGTSKLSQSRKKNSSIKNVEKNHISVLQNHSFSLCYSELRNCPPKADLEKNA
KDSRTSPVLRNFEQAPSPVKDLECLVLQEGKMEQDSEEGDVGELKIRYEDYQENKTERKI
VAQQEAHYKFFPSVILSNCLSRPVKKQVGSKTIDSGGSLDHLEQKRSRMKLSKKRNSPAS
QKRASLTESSQTSKDEVAADFTSITSIQPSKETEENAEMETSDLAESDAVEKVSAEGSVE
ESLTDLPDKIACTEVSSLPGSKYTLRTKRKMMNYDSEDGDYSSPSSFKQSLAHRDSHKEN
CFLTSSRKKRKLSKKEPPVIIKYIIINRFKGQKNMLVKMARVKGDEPQVVLTPQKLEHYE
KLAPLKDFWPKVPESTAVRYPVPEPKVKKHPKRKTKVTPQSAKLCNLPKTSFVKGSKISR
TKKVKTLPLTKLPAPKPCYNDFTDDFCKEYSDVMLDLGYLSERAPSPTDSTPPRCWSPTD
PLLESESNACLINPHTDPCLGLPYEGLSRNHYGSRGRTSRPRRLSSGASPKGKTKTAVKP
SEVASTIPGDEQTKNSRRTSRKPKKDVDIREGIDNSKSAPQKTRRSCKKNKTERLQRSSV
VEGSLNISQSLYPADDLPPTQTPSDDLTPYQHPGSCQNNFQVSNDSQALPCTTEPKSELV
QSNIGDELVISVPASLQQGSQSSQGAANPSAEKTTGFPCSVIKHSNSNSSSLAVSEDGTS
PCEFKTEACGGKQTSKDIHYSQPDPKMPAKPRRRQPKKKVENPAVQTPEITTSLNVLTHG
PQKDLAQHQSMPKNGETPAHPEMPSGIAVLKALLQKRQFKEGQCSQGDNVLNSVSNTKQS
ADVAKPRRTPSVTPRKPKISKTPLPKESKPRSRKGKNGKTEDRIRLEPPLSDGSPVFLSD
PGFDSSYSIEDSLSPEVPHNYSFDINAVGQADFSSLYSGSQFVLTDKNLPQKFLSDIKQE
PVSSLGLENSQRKVLDVVENCMHESERPVSPELFDRASGRDREGLSNEFSLSLLDSEKVL
RNRNWGISLAKMHGSHFQDFHCERSDLLLGPDHFLPLTSVSFADNGVSPTADLLDGSEVF
TSTTPSSSPRSISSLSQIRSSSQAQKSAGVHILKPLMSPPSREEILSTLLELELSEATYQ
EPFCSDPSDVPLRPREIAGRKLILETRLTKDLVEFVGGLTQEGLQFWKTAFAAMTHPGSS
PSCGTNSSNLTKDKKERSSPSPTSDQKVILLPCKSAPSRERVQLWLQAKRQFECLQRDRK
KRLGAQNVMSAQDDNKAPRREKSESVLPLSQKQDEASEKASALQTFRKNELILPLSISPI
EAGTSNSSPKETKCAVEAEIREQEEREGNSFKQTPSPDPSCLPPWQQTSENVDLDKKKQE
LGVGLTSPKLGSSVDPLSPESIKPKHFLSPSPFPLKDHGSSSPSLLHSTPILSKRRSKGV
CELDCSPGSEDVELKSQRLQQRRNGNMSALRRVLLTTQMKNQFAGLNVPKGDNSQIEGPS
LCNSYGFKVGMQNLQEAKALHEVQHLTVMALELHARTRRDLEPDPEFDPICALFYCFSSD
SPLPESDKKQITGAVVIDKDCRSSGQGSRSTAPLLVRSGVADLQVIYTVDEKELFVEVCR
MMKTVQKWSSCPGGGAVGEESLRKGTISQYFTTLHCPVCDELTQLGVCERCRAEPQRVAV
TLHHNLRMWEQQHDQLLKVCMSCSGSADRQAVCVSLDCPVLYKLFRVNRQLHNAPYLRQL
LQQL
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggccaatcacagggcgagtgggcggggttttgtgcggacccagagtgacatt
gtagctgatgatgatgaagatggatatgatgatgaggatgatgatttaccagacctctcg
cttcatcctgatgatctgagtcctgatgatccgccattggtacctgccagccaagtggat
gtgcacaaagatacggccacagacaataaacggtctgacggcaaagctgcagaagtggct
gtcgtggatgaagaggccattttgagcttgttggagagcagtcagaccttcctgccgatg
tctcagaagtctaacagttcccttattctcgataacagccaggatctggcgatggtggac
tttctcgagggactcgcagatcatcgatttcaaaaagacgttccaataaccgctccccgt
caggagttatcagaaagtcttaggtgtccctacaacagtgatgaagaagaggcggtgcct
gagctcgagaaagaggaggcagagctaagcatgatgatgtcgcaaagatgggatactgat
attccagagccatcagctcgacggctagtgaaggaaacaaacgaaagctccactgaagaa
gagcatgagttgtcagaggaagagatggactggagtggaaacaacaccctttttgctaat
ctgtccattccccaactggatggagctgcagacgagaacagcgattcatcgttatctgat
aaaggatctcgaactcactcgtctcttactgctaatgataagatgttgggcaggaaaaat
cgcttccagagtgaaactgttcacctagagcccccatcctcggctaaaatccttctcgag
tgcaaacaccccgagcatagacagtccctatcccttgataaggaggaaccagctgacaaa
agtcttcctgataaaagtcaagaagctagtgaaccattaacagggctcaaagtgaataaa
gacatcccttatatcccaccagtcaagcacccaattctgtcaaatgtgtcccagattgga
gctgacagagtgggcgggcacctgcttcacaccatcgagaacaaagccgtaggtgttaac
cagccagatccagagagtttgagttttggaacctcaaagctctcccagagccgcaaaaag
aatagtagcatcaaaaatgttgagaagaatcacatttctgtcttgcagaatcacagcttt
tccttgtgttattccgagcttaggaactgcccccctaaagccgacctggagaaaaatgca
aaagactctagaacctcacctgtgctgaggaattttgagcaagctccgagcccagtgaag
gaccttgagtgtctggtacttcaagagggtaaaatggagcaggacagtgaagagggtgat
gttggggagctgaagatcagatacgaagactaccaagaaaacaaaacagaacggaaaata
gtggcccagcaggaggcacactacaaattctttcccagtgttatcctctcaaactgcctc
tcaaggcctgtgaagaagcaggttggaagtaagacaattgacagtggtggtagcttggat
catctggaacaaaaaaggtcaagaatgaaattaagcaagaagaggaacagtccagcaagt
caaaagagggcaagtctgacagaaagttcccaaacctctaaagatgaggttgctgcagat
tttacctcaatcacatcaatccagccgagcaaggaaacggaggagaatgctgagatggaa
acctctgaccttgcagaatctgatgctgtagaaaaagtttcagctgaaggttctgttgag
gaaagtctgacagatcttcctgacaaaatagcttgcaccgaagtgtctagtttacctggc
agcaaatataccttacgcacaaaacgtaaaatgatgaattacgacagtgaggatggtgat
tattcaagtccgtcttctttcaaacaatccttggcacatcgagacagccataaagaaaac
tgttttcttactagtagtcgaaaaaagaggaagttgtcgaaaaaagaaccaccggttatc
atcaaatacattataattaacaggtttaaaggtcagaagaacatgttggtaaagatggcc
agagtcaaaggagatgagccacaagtggtactaacaccacagaagcttgagcattatgag
aaacttgcccctctgaaagacttctggccgaaggttccagagtcgacagctgtcagatac
cctgttcctgaaccgaaggtaaagaagcatcccaaacggaaaaccaaggttacaccacaa
tcagcgaaactctgcaacctcccaaaaacaagttttgtaaaaggcagcaagatcagcagg
actaagaaggttaaaacgttaccgttaacaaaacttcctgctcctaagccttgctataat
gacttcactgatgacttctgcaaggagtattctgacgtgatgctggatttgggttatctc
tctgagagagcacccagtcctactgattcaaccccacctcgatgctggtctcctactgac
ccccttttagagtcagagtctaatgcttgtttgataaaccctcacactgatccttgtctt
ggcttgccatatgaaggattgtccaggaaccattatggcagtaggggcaggacatctaga
ccaagaaggctttcttctggtgctagcccaaaaggaaaaactaaaaccgctgttaagcca
tctgaggttgcatctacaatacctggagacgagcaaacaaaaaacagccgtagaacttca
agaaaaccaaagaaagacgttgatattagggaaggaattgacaatagcaaatccgctcct
cagaaaaccaggaggtcttgcaagaagaacaagaccgagaggttgcaaaggtcctctgtg
gttgaaggatctctaaatatttcacagtctttgtatccagctgatgaccttccaccaaca
caaactccatctgatgatttgactccctatcagcatccaggttcctgccaaaacaatttt
caggtcagtaatgattctcaagcactaccatgtaccactgaaccaaagtcagagttggtc
cagtcaaacattggagatgaactggtcatcagtgtccctgcttcactacaacaaggttct
cagtcttctcagggtgctgctaatccttctgctgagaagaccactggatttccatgctcg
gtcataaaacatagtaactccaactcaagttcacttgctgtaagtgaagatggaaccagt
ccatgtgaatttaaaactgaggcctgtggtggaaaacaaacctctaaagatattcattat
tcacagccagacccaaagatgcctgccaaacccaggagacgtcaacccaaaaagaaggta
gaaaaccctgctgtacaaacccctgagattacgacatccttgaatgttttaacacatgga
cctcaaaaagatcttgcccaacatcagtcaatgccaaagaatggagagacgccagctcat
ccagagatgccttctggcattgcagtcttgaaggcactgctccagaaaagacagttcaag
gaggggcagtgttctcagggagataatgtattaaacagtgtttctaacactaaacaatct
gctgatgttgcaaaacctagaaggacaccttcagtgactccaagaaagcccaaaatatca
aaaactccactgccaaaagagtctaagccaagaagtagaaaaggaaagaatggcaaaaca
gaagaccgcattcgattggaacctccactttcagatgggagccctgtgtttttgtctgat
cctggttttgatagctcctactccattgaagatagcttatctcctgaggttcctcataat
tacagttttgacattaatgctgttggccaggccgacttctctagtttgtattccggtagc
caatttgttttaacagacaagaacttgcctcagaagttcctcagtgatatcaaacaggaa
ccagtgtcctctctgggtttggaaaacagccaacgaaaggtcctagacgttgtggagaac
tgcatgcatgaatcagagagaccggttagccctgagctcttcgatagagcctctggtaga
gaccgcgaagggttgtcaaatgagttctctctgtctctgttggattcggagaaggttttg
agaaacagaaattggggcatttcattggctaaaatgcatggcagccactttcaagacttt
cactgtgagagaagtgacctgttattaggtcctgaccatttcttaccccttacatctgtc
tcttttgccgataacggcgtgtccccaacagcggatttgctggacggtagtgaggttttt
acatcaacaactcccagcagttcaccgcggtctatcagctctctctcacaaataaggagc
agcagtcaggctcagaagagtgcaggagttcatatcctcaagcccctgatgtcccctcct
agtcgggaggagattctttctactctgctggagctggaactttcagaggccacctatcaa
gaacctttttgcagtgacccctctgatgtacctttgaggccaagagagattgctggacgc
aagctaattctggaaacaaggttaacaaaagatctggttgagtttgttggtggtttaaca
caagaaggtctgcaattctggaaaactgcattcgctgccatgacacatccggggtcttca
ccgtcctgtggcactaactcgtcaaacttgaccaaagacaaaaaggaacggagcagtccg
tcccctactagtgatcagaaggtcattctactgccttgcaaaagtgctccaagccgggaa
cgagtacagctatggctgcaagctaagagacaatttgagtgccttcaaagagatcggaaa
aaaagacttggtgcgcagaatgtgatgtcggctcaggacgacaataaagcaccacgccgt
gagaagtcagaaagcgttttgcctctctctcagaagcaggatgaggcgtctgaaaaggct
tcagcgttacagacattcaggaagaacgagttaattttgcctctcagtatatctccaata
gaagcaggcacctctaacagtagtccaaaggagacgaaatgtgccgtggaggctgaaatc
agagagcaagaggagagagagggcaactccttcaaacagactccatctccagacccttcc
tgtctgccaccatggcagcaaacttcagaaaacgtagatctggacaagaagaagcaggaa
ttgggtgtcggattaacgtcccccaagctaggcagctccgtcgatcctctctcgccagaa
agcattaaaccaaagcactttctcagtccgtctccatttcctctaaaggaccacggcagt
tcaagtccctccctcctccacagcacccccatcctcagcaagaggagaagcaaaggagtc
tgtgagcttgactgcagtcctggatcagaagatgtggagctaaagtctcagagactccag
caaagacgaaacggtaacatgagtgcgttacgtagagtgctgctcactacacaaatgaag
aatcagttcgctggtctgaatgtacccaaaggggataactctcagatcgagggtccgtcg
ctgtgcaactcgtacgggtttaaagtcggcatgcagaacctacaggaagctaaagcgctg
cacgaggtgcagcacctgacggtgatggctttagagctgcacgctcgaacacgccgcgat
ttggagcctgaccccgagttcgaccccatttgtgccttattttactgcttcagctctgat
agtccgcttcctgaatcggacaagaaacagataaccggcgccgtcgtcatcgataaagac
tgtcgctcctcaggacaaggctcgaggagcacagcgcccctgctggtcagatctggtgtt
gcggatctgcaggtcatttacactgtcgatgaaaaggagctgtttgtggaagtctgcaga
atgatgaaaacggtgcagaagtggtcttcatgtccaggtgggggcgctgtaggggaggag
tctctgaggaaggggacgatctcgcagtacttcaccacgctgcactgcccggtgtgtgat
gagctcactcagctgggagtgtgtgagcgctgcagagccgaacctcagcgcgtcgccgtc
acactgcatcacaacctccgaatgtgggagcaacaacacgaccagctcctaaaggtgtgt
atgagctgcagcggcagtgcagacagacaggctgtctgtgtctctctcgactgtcctgtg
ctgtataaactgttccgggtgaacagacagctccacaacgccccctacctgcgacagcta
ctgcagcaactctaa
DBGET
integrated database retrieval system
