Pangasianodon hypophthalmus (striped catfish): 113525222
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Entry
113525222 CDS
T05759
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113525222 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113525222 (irf6)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113525222 (irf6)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113525222 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
113525222
NCBI-ProteinID:
XP_026767495
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSVHPRRVRLKPWLVAQVDNGTFPGLVWLDREAKRFQIPWKHATRHTAQQEEENTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPAPL
SNPGSTGSAPAYDSDGEDDDVPDTPEPPPPPYHPPVGGSPLAPPVWTSPGSTSPLQPSPL
QPSPLQPSPQVWPKKEPQDVEMNTPAAMEIQPASNMDTQPITDVLFTTPETWISSLPMTD
LEVQFYYRGKEVCPTLTVSNPQGCRLFYGDLGPMVNQEELFGPVSLEQLRFPSTEHITND
KQRLFTNRLLDVMDRGLILEISAHDIYAVRLCQCKVYWSGPCGPNASAPNLIERQRRVKL
FCLETFLSSELSYQQLCSYLTEEQKFLKYLKYLIVVVPVVARIITEMFSSDGTRSFDSSS
VRLQISVPDIKDNIVTQLKQLYRLLQNHQGNEAWPLPSAGPTHLPHPLHAQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaccctcggcgtgtacggctgaagccgtggctcgttgctcaggtggataat
ggcacgtttccgggtcttgtgtggctcgaccgtgaagcgaaacgcttccagatcccatgg
aaacacgcaacacgtcacacagctcaacaggaggaggagaataccatcttcaaggcgtgg
gctgtagagactgggaagtttcaggaaggtgtagatgaacccgaccctgcgaagtggaaa
gctcagttacgctgcgctcttaacaagagccgtgagtttaacctcatctacgatggaaca
aaagaagttcccatgaaccccctgaagatctatgacgtgtgtgacatccccgcccccctc
agtaaccctggttccacaggttctgctcctgcatatgactctgatggtgaagacgatgat
gttcctgatacaccagaacctccaccacctccatatcacccaccagtgggcgggtctcct
ctggccccacctgtgtggacttccccaggctccacctcccccctgcagccctcccctctg
cagccctcccccctgcagccctctcctcaggtgtggcctaaaaaagagcctcaggacgtg
gagatgaacacaccagcagccatggagatccaacctgcttccaacatggacacacagcca
ataactgacgtgctgttcactacaccggagacctggatcagctctctgcccatgacagat
ctggaggtacagttttattaccgtggtaaggaggtgtgtccaacgctgacggtcagtaac
ccgcagggctgcaggctgttttacggggacctgggcccgatggtgaatcaggaggagctt
tttggacctgtgagtctggagcagctgcgtttcccgtccactgagcacatcactaatgac
aaacagcgtctcttcaccaaccgcctgctcgacgtcatggaccgcggcctcatcctggag
atcagtgcacatgacatctacgccgtgcgtctctgccagtgtaaagtgtactggtctggt
ccatgtggtccaaatgccagtgcgcccaacctcatcgagcgccagcgccgagtcaaactc
ttctgcctggagaccttcctcagcagtgagctatcataccaacagctatgtagctacctg
actgaagaacagaaatttctcaaatatctcaaatatctcatagtagtagtccctgtggtg
gcgaggatcatcactgagatgttcagttcagatggaactcgttcctttgacagctccagt
gtgcgtctccagatttctgtcccggacataaaggacaacattgtcacacagctcaaacag
ctgtaccgcctgctgcagaatcaccagggcaacgaggcctggcccctcccatctgctggc
cccacccacctgccccaccccttgcatgcgcagtga
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integrated database retrieval system
