Pangasianodon hypophthalmus (striped catfish): 113525436
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Entry
113525436 CDS
T05759
Symbol
tspear
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113525436 (tspear)
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113525436 (tspear)
Cilium and associated proteins [BR:
phyp03037
]
Other cilia and associated proteins
Stereociliary proteins
113525436 (tspear)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
113525436 (tspear)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
113525436
NCBI-ProteinID:
XP_026767742
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MNAALMLLKFVILLCCFISSWSAPWRPCTGTLPHLEQHLLPLDLLHHVLPVVGSHQTQVR
MVQSQGSRGLKLSGPPQALSFPSSQIFTNCNFFPAEFSIVVTLKIPKLNPYKDEYIFTLL
DGDSDELLVGLRLAHDKVHFLRRIDDRTERVTFRQVNMVDGHWHTMVLALSGHYAILTLD
CGVPIELQLEKPFPEQLYTGGSTFFIGSRRRWSGLFSGLIRQLVLMPGSDASSRLCPSSD
PTLSVLSVPQILLHLPVKPPTNQLPFYPYEAELRVTQRVPPVCVSSVVGQLWFSIEKRSL
FLCNGTTWLTMLHEKEKLDYVEDHQDLFTNSETFDIEVFHLPSLGLFIATANRDSSYGSA
IYRWTNGRFERFQNINTYDAQAWKFFTVGKKRFLVVANSRRSDDNKRGELSVIYKWRVKK
QRFVEYQKIQTHSARDWEAFRIQDDNFLAVANHREGEMNHNIDSVIYRWNRDTRKFEVNQ
TISTSGAYDWEFFTIGPYHFLVVANSFNGKSTDISSTIYIWLGGRFQPFQYITTFGAIDW
EMFQIDNRFFLAVANSQKLSDSSTVLYNINSTIYELNTTSQSFIKFQDIATSSALDWEFF
TVGDDKFLVVANSYDGASYSVNSVIYRWQGYEGFVPVHRLNTHGCRDWEFFTSSDGSYLI
SSSARAAYSKVLKLKTYFQR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagctctgatgctgctgaagtttgtcatccttctctgctgtttcatcagcagc
tggtcagcgccatggagaccatgcacaggtacacttccacacctagaacagcatctgtta
ccactggatctgctgcatcatgtccttcctgttgtaggcagtcaccagactcaggtccgg
atggttcaatctcagggttcaagaggactgaagctctccggacctccacaagctctgagt
ttcccatcatcacagatcttcaccaactgcaacttcttccctgctgagttctccatcgtg
gtcacactgaagatccccaaactaaatccttataaagatgagtacatattcactcttttg
gatggagattcagatgagctccttgttggtcttcgtctcgctcatgataaagtgcacttc
ctgcggcggatagatgacaggacggaacgtgtgaccttcaggcaggtgaacatggtggac
ggacactggcatacaatggtgcttgcactcagtggccactacgccatactcactctggac
tgtggtgtcccaatcgagctgcagctagagaagccatttcctgagcagttgtacacaggt
ggttccacattcttcatcggcagcaggaggagatggagtggcctgttctctggtttgatt
aggcagctcgtcctcatgcccggatcagatgcgtcctctcgtctgtgtccctcatctgat
cccacactgtctgttctgtcagttcctcagattctcttacacctgccagtcaaacctcca
accaatcagcttccattttacccctatgaggcggagttgcgtgttactcagcgtgttcct
ccggtgtgtgtcagttctgtagtgggccagttgtggttcagcattgagaagagatcgctg
ttcctgtgtaatggcactacatggctcaccatgctgcatgagaaggaaaagttggattat
gttgaagatcatcaggatctcttcacaaactcagagacgtttgatattgaggtttttcat
ctcccgtctcttggtttgttcatcgctacggcgaatcgtgactccagctacggttcagca
atttacaggtggaccaatggcagatttgagcgatttcagaacatcaacacatatgatgct
caagcatggaaattcttcactgtgggaaaaaagaggttcttggtcgtggcaaactccaga
agaagtgatgataacaaacgtggtgagctttcggtgatttataaatggagagtaaagaag
cagcgctttgttgagtatcagaagattcaaacacacagtgctcgcgactgggaggccttc
cgtatccaagatgacaacttcctcgctgtggctaatcacagagaaggtgagatgaaccac
aacatcgacagcgtgatctacaggtggaaccgagacaccaggaagtttgaggtgaatcag
accatctcaacatctggagcctatgactgggagttcttcaccatcggaccgtaccacttc
ctggtggtagccaacagctttaacggcaaatccaccgacatcagctccaccatttacatc
tggctgggggggaggttccagccattccagtacatcacgacatttggagcaattgattgg
gagatgtttcagatcgataacaggttctttctggctgtagcgaactctcagaaactcagt
gactccagcacagttctctacaacatcaactccaccatctatgaacttaatacaacctca
cagagttttattaagttccaggatatagcaacaagcagtgctttagattgggagttcttc
actgtgggtgatgataagttcctggtggtggcaaactcatatgatggagcttcatactca
gtaaacagtgttatatataggtggcaaggttatgaaggattcgtgcctgtgcacagactg
aacacacacggatgcagagattgggaattcttcacttcctctgatggatcgtacctcatt
tcctccagcgccagagctgcgtactccaaagtgctcaagctgaaaacctacttccagcgt
tga
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