Pangasianodon hypophthalmus (striped catfish): 113525483
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Entry
113525483 CDS
T05759
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113525483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113525483
03021 Transcription machinery [BR:
phyp03021
]
113525483
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113525483
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
113525483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
113525483
NCBI-ProteinID:
XP_026767818
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETNKCAMESGDGNTGAQTNGLDFQRQTVQTTNAITNA
QAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQQHSASQQSSTTGASISASAATPITQIP
LSQPIQITPQLQQLQQQQNLNLQQFVLVQPGHPIAAQLQPAQFIISQTPQGQQSLLQAQN
LLTQLPQSQANLLQSQPSITLATQPATPTRTIAATPIQSLPHNQTTPKRMETPSLEEPSD
LEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKP
LLEKWLNDAVCAENQTSDQGLSSPSSIGSPGLGMEGLNRRRKKRTSIETNIRVALEKSFL
EQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAASTPIKAIFSPST
PLVPSTASLVTSSTSTTLTVNPILPLTSTSISSIGLTGTTVGSATTKAASAISTVPAVTT
ATSSPSLSPSTSVPQALSAESVVTQEAASTVTQAPTTPVNTLGTGQVMVAASSLSAALQG
AAQLPTSASIAAMAAAAGLNPGLMASSQFTPGGALLSLAPGALGSALSPALMSNSTLATI
QGVWNALASSGTLPITSLDGSGNLLFANANAGSTPNLVTAPLFLNPQNLSLLTSNPVSLV
SAGGAAGAAGALNLHVAADHNAVTTATVPASTISTASKAQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccgtcagaaacaaacaaatgtgcaatggagagtggggacggaaacacaggtgcccaa
acaaacggactggactttcagaggcagacggtgcaaacaacaaatgcaatcaccaatgca
caagcacaagccttgctccaacagttgactctgactccagcgcaacagcagttgttgcta
cagcaggctcaggcgcagcttttggctgcagctgtgcagcagcactcagccagccagcag
agcagcaccacaggagcgagcatctctgcctccgctgcaacgccgatcacacagatcccg
ctttctcagcccattcagatcacacctcagttgcagcagctgcagcagcagcagaacctc
aacttgcagcagtttgtgctggtccagccaggtcatccaattgccgcccagctgcagcca
gcgcagttcatcatctcacagacgccgcagggccagcagagcctcttgcaagcccagaat
cttctaactcaactacctcaaagtcaagccaacctcctgcagagtcagccaagcatcact
cttgccacacagccagcaacaccgacccgcacgatagcagctacccccatccagtccctc
cctcacaaccagacgacaccaaagcgcatggaaacgcccagtctggaggaacccagtgat
ctggaggaactggagcagttcgccaagaccttcaaacagaggaggatcaaactgggcttc
actcagggggatgtcggccttgctatgggaaagctgtatggaaatgacttcagccaaacc
accatttctcgcttcgaggccttgaacctgagctttaaaaacatgtgcaagctgaagcct
ctgttggagaagtggctaaatgatgcagtgtgtgcagagaaccagacgtcggaccagggc
ctgtccagccctagctctattggctcccctgggctgggcatggagggcctcaaccgccgt
cggaagaagaggaccagcatcgagaccaacatcagagtggccttagaaaagagctttcta
gagcagaaccaaaaacctacctctgaggagatcaccatgattgctgaccagctgaacatg
gagaaggaggtgatccgtgtgtggttctgcaaccgccggcagaaggagaagaggatcaac
ccgcccagcagtggcagtgctgccagcacccccattaaagcaatcttctccccctccaca
cccctggtgcctagcacagccagtcttgtgaccagtagcacctcgactacactgactgta
aatcctattctgcctctcaccagcacgagcatctccagcattggactcactggcaccact
gtgggctcggcaactactaaggctgcatccgccatctccacggtgcctgctgtgaccacg
gcaacctcgtcgccctcactcagcccctccaccagtgtgccacaggccttgtcggctgag
tcggtggtgactcaggaggcagcaagcaccgttacccaggcacccaccacgccggtgaac
acactgggcacaggccaggtaatggtggccgcgtctagcctgtctgccgcactgcaggga
gctgcacagctgccgaccagcgctagcattgcagccatggctgcagccgcaggcctcaac
ccaggcctcatggcatcttcacaattcactcctggtggggctctgctgagtctggctcct
ggtgctctgggcagtgcattgagtccagcactgatgagcaacagtactctggctactatc
caaggtgtgtggaatgctctggcttcaagcgggactctgcccatcacctctctggatggc
agtgggaacttgctttttgccaacgccaatgctggcagcaccccgaacctggtgacggcg
ccactcttcctaaacccgcaaaatctgtcactgctcaccagcaatccggtgagcctggtg
tctgctggaggagctgcaggggctgctggggccctcaatctgcatgttgctgcagaccac
aatgctgttaccacggcaacagtgcccgcctccaccatcagcaccgcctccaaggcccag
tga
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