Pangasianodon hypophthalmus (striped catfish): 113525687
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Entry
113525687 CDS
T05759
Name
(RefSeq) hemicentin-1-like isoform X1
KO
K17341
hemicentin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113525687
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
113525687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
EGF_CA
VWA_4
C2-set_2
Ig_5
G2F
cEGF
Ig_6
GBD_Hemicentin
C1-set
C2-set
Izumo-Ig
FXa_inhibition
EGF_3
TSP_1
Adeno_E3_CR1
TSP1_spondin
EGF
VWA7_4
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
113525687
NCBI-ProteinID:
XP_026768068
LinkDB
All DBs
Position
Unknown
AA seq
3064 aa
AA seq
DB search
MEFWVKFLAVALALFQTRAQLNPEHEISGSSLAFVFDVTGSMYDDLQQVMDGASRILHRM
LSRTDTPIRNFVLVPFHDPDIGPVSITSDPKQFQHDLQELFVQGGGDCPEMSVGAIHSAL
EVSLPGSFIYVFTDARAKDYRRKQEVLQLVQLRQSQVVFVLTGDCGDRSQPGYRVYEEIA
ATSSGQIFHLDKQQVNEVLKWVEETVRAMKVHLLSSDHELGQGTQWELPFDPSLKEVTVS
LSGPTPRIELRDPLGRIVGERQGLRELLNIPNSVLVVNLKNPRPGLWTLKVVSSGRHTLR
VTGVSNLDFRAGFSTSAVTEFSRTRERPIKGAPVHALLKCSGLNPPGVLSSVVLVSKRGE
DLLSVSLPVPVDGGVSGVWSVPEMQTPSEGFFIKVRGKDGGGFDFHRLSSVLYTNIIPVI
PVVEMPSVLRGMLMQSVLIECSVQSDLPFTLTFRKDGEMLGHQNSYQSSAKVSWEILHVS
VRDEGMYECMAQSTAGVGRAHTHFTVTAPPMIDHSVSEVTAAVGEPVTLPCVLMDGAPPT
DIIWTHNGQKVQSGERISIRSDGSLHMKRATAEDAGKYLCTAVNVAGSANVTVTLQIHTP
PVISAAAAHYEAAEGVSVSLPCETTGIPKPSITWTKGDEPVSSPPQSDGSLLIFSSTAAD
SGRYICTASSSAGETRREITLTVHSKPRILGAHEHTEVINMMVEEGAEVILPCEVEGSPA
PTVSWSRNGQLLPPITACISGAIEVTVLPSGSLKIRNVQLNDSNIYTCTAENPAGVNTLT
YSLQVQVPLRIVGQQEEEVSAVEGHMASLLCDVQTHPAPEIIWTRDGQLLQLGSGVRLLS
GGKMLQISRVQQRDAGQYVCTATSSAGQDQKSIMLNVYAPPTLLPLPHSVSEVMTPQIGS
SVTLSCEARGVPEPEVTWYRNGQKLNSGRTLQLASQKLTINSMQVSDGGVYTCKVSNPAG
QLERKFMLTAHVTAPLVIEGPVHESVTHTLGSHITLVCDASGVPAPNMRWLKDSLAFGSG
SVLSLGPLELSHSGVYTCIAHNSKGETHKNYTLTIQVPPTILNSGPSDVSALVGAELTLK
CHAEGTPTPQLAWMRNGVKLDNTEHVHVSANGSTLTLLSVKEEDAGTYTCLAISPAGQES
KIYTLFVLVPPSILKHSDVPLDVQAVHDGVVSLECHAVGIPPPQITWLKDGNPLQLTPRT
HLHSTHTLLRISPVQLSDSGLYTCVARSKAGFAEQKFHLQVEAPAMVEHTEPMEHIVIVR
GSVVTLVCEAHGVPPPTLTWMKDSEPLSLHQNMMLHDGGETRFQLLDVQLEDAGLYSCTA
KNQAGTSTKTFNLTVLEPPKISSSLRREELMVVVDGVLELECVADGVPPPTVSWMKDGRP
LEDSRVVLHRDGQILTISNIQVEDAGVYTCLVSNLAGEDGRSLWVRVQLPPTLLGSSDIR
TVSVPLKGHMTLECRTDGELPPEIEWYRDNIKLQLSGRIQSIAGGQYLEIGDVRKEDGGL
YSCVVSNMAGSSSLHFNVQILLPPVIREGSPLVTAHVNQKVLLPCEVEGDSAPSVLWRKD
GVPVLFDNRFVLLPDGSVRIESTQLTDAGRYYCSVSNEAGSDQRSMELRVYVGPSISPGP
LNVTVTMGQRAVLGCESLGVPVPQVSWKRNGQALNTHSGAYRLMPSGSLLIISPSLEDEG
YFECTVTNEVGEEQRVIEVMLQVPPSIEDDVTSVTAIKMESVVLPCHVTGRPTPSISWSR
GGTALGTRRGSYRTLPTGMLEILAVNPTHAGRYTCSAQNTAGVARKHIILSVHEAPEIRN
MVKEVNVLLNQEVVLICDVHGFPKPSVTWLKEGVPIAKGQRLVVLSDGSLRLSQVTLDDA
GTYSCLAQNAAGTTEGKTQLILQVPPVISVPHDEYTLSVGESVSVPCSAIGQPEPELQWH
KLGGAVRGRANLLTFTNGTLHIKNAQLKHAGVYTCTALNSAGRASRDITLILHVPPMILV
GQSEVSVIQGFQSLLPCSAQGVPEPKIHWEKNGDIIQNLRGKFTVLRSGELIIERTQPSD
AGVFTCVAMNAAGSAHHKVQLSVNTRPEFKESPSDMTLRVGQNLTLTCHAHSTPPPVITW
TVNSRPYTGFSVDEAGRTFLMIGNVTVRDSGSYVCTAENSVGSIRALAFVRVTEPPVLRG
DGHVSQFVSRGAVVVLDCPVRGTPAPVLRWFKDGHLLKVTEHLHRLPNGSLVLYSAMSRD
SGEYQCVAENEVGVIKRTISLKVQVAGGYSHWEQWGPCSVTCGHGLQQRTRFCNNPSPTN
GGAACEGPDIESKQCQASLCSGDSLRRARASVIGMVNDREFGVSFLEVNISENSKRRSST
LEAHMENVPPSVGPLLKVLVSALTPIYWTAVYESAGTKNGFSISRGNFRQESQLEFHTGE
ILKMTHVVRGVDAEGVLLVDVVINGFIPAVFLSPVLHQHDFDETYVQVGSGQIYSWSTQN
SLQQDVDSVLTLRCNHSLVFDGSVKRFAPLLQQIRLSDISSSYNMLNFRLDFHITAMLSL
PDGDGEKCPEGFLLDKASYCADEDECVSDSPCSHSCINIMGSFRCSCPSGFNLNTESNSC
QDIDECVDGSHMCLYNQLCVNTVGKYRCEVKCGPGFRHRTAGTENRTRIEGCEDVDECVE
SSVSPCQHQCFNTLGSFRCGCLPGYQLVGHRCFDINECLRSVCPSHQQCKNTDGGYQCFD
NCPSGMTQAESGVCVDVDECKDGSHMCRYSQICQNTLGGYLCVCPRGYRSQGVGKPCVDV
DECAQSPSPCGYQCRNVPGSFRCLCPPGTVLLVDGRSCAGLERGNGFSNRTWVRVGLQPQ
LVSTRGQTLTLLQNTQPGAPWNNLHTCPPGYTSKASSCVDIDECALRKPCQHECQNSVGS
FQCFCPSGYQLMPNGQTCRDIDECIEHSVQCGPNQMCFNMRGSYQCLDTPCPASYRRGGS
PGVCYKPCSHGCAEGSSLLLQYKLLTLPLGIPAQHNVIRLSAFSESGVLQERTLFAILEQ
SGEITEQLFGIKDEAGRGIIFTTHYLNQSGLVKLKVQATTLNQHGQITYQSLFIIYISIS
AYPY
NT seq
9195 nt
NT seq
+upstream
nt +downstream
nt
atggagttctgggtaaagtttttagcggtagcgttagcgttgttccagactcgcgcgcag
ttaaatccggagcacgagatcagcggctcttctctcgcgttcgtgtttgacgtcacgggc
tccatgtacgacgacctgcaacaggtgatggacggagcctcgcgcatcctgcaccgcatg
ctgagccgcacggacacgcccatccgcaacttcgtgctcgtgccgttccacgacccagac
atcggccctgtttccatcaccagcgaccccaaacagtttcaacacgaccttcaggagctc
ttcgtccaggggggaggtgactgtccggagatgagtgttggagcgatacactccgctctg
gaagtttctttgcctggatcatttatttacgttttcacagacgctcgagctaaagattac
agacgtaagcaggaagtgctgcagctggtgcagctcaggcagtctcaggttgtgtttgtg
ttaacaggggattgtggtgatcgctctcaacccggttacagagtgtatgaggaaatcgca
gccacaagctctggacagatcttccacctggacaaacagcaagttaatgaggttctgaaa
tgggttgaggagaccgtacgggccatgaaggtccatttgctctcttcagaccatgagctt
ggtcaggggacacagtgggagttgccctttgaccccagccttaaggaggtgactgtgtct
ctgagtggtccaacacctcgcatcgagctcagagatcctcttggtcgtattgttggtgag
agacagggactgagagagctgctgaacatcccaaactctgttctagtggtgaacctgaag
aacccacgtcctgggctgtggacactgaaggtagtgtctagtgggcgacacacactccga
gtaactggagtcagtaacctggacttcagagccggtttctccacttcagctgtcactgaa
ttcagcagaaccagagaacgacccatcaaaggtgctcctgtgcatgcacttttgaaatgt
tcaggtctgaaccctcctggtgtgctcagtagtgtggtgttagtgtcaaagcgtggtgag
gatctgctcagtgtttcacttcctgttcctgtggatggaggagtgagcggagtgtggagt
gtgccagagatgcaaactccatctgaaggcttcttcattaaagtcaggggaaaagatgga
ggcgggtttgacttccatcgactctctagtgttttatacaccaacattattccagtcatt
cctgtggtggagatgccctctgtcctacgtgggatgttaatgcagagtgtgttaattgag
tgcagtgtgcagagtgaccttcccttcacactcaccttcagaaaagacggagagatgctg
ggacaccagaacagctaccagtcttctgccaaagtgtcatgggaaattcttcatgtttct
gtaagagatgagggaatgtacgagtgtatggctcagagcactgcgggagttggacgagct
cacacacacttcactgtcacagcgccccctatgatagatcatagtgtatctgaggttaca
gctgcagttggtgagcctgtcactctgccgtgtgtgctgatggacggagctccacctact
gacatcatctggactcataatggacagaaggtccagagcggtgagcggatctccatcagg
agtgatggcagtctgcacatgaagagagctaccgcagaggatgctgggaaatacctgtgc
actgctgtgaatgtggcaggatcagcgaacgtaacggtcacgctgcagatccacactcct
cctgtgatctcggctgctgctgctcattatgaagctgctgaaggagtgtctgtttctctg
ccatgtgaaacgactggaatcccaaaaccgtccataacctggaccaagggtgatgagcct
gtttcctctcctccgcagtctgatgggagtttgttgatcttcagctcgactgcagcagat
tcaggacgttacatctgcacagcgagcagctcagctggagaaacacgcagagagatcact
ctcactgtccactcaaagccccgtatcctcggagcacatgagcacactgaggtcattaac
atgatggtggaggagggggcagaggtcatcctgccatgtgaggttgagggaagccccgcc
cccactgtgtcctggagccgtaacggacagctccttccaccaatcactgcgtgcatctcc
ggagccatagaggtcacagttttgccttccggctctttgaagatcagaaatgttcagctg
aatgacagtaacatttacacctgcactgctgagaacccagcaggagttaacacactgacc
tacagtttacaagtccaggtaccgctgaggattgtgggtcagcaggaagaggaagtgagt
gctgtagaaggtcacatggcctctcttttgtgtgatgtacaaacacacccggctcctgaa
atcatttggacgagagatggacagctgctgcagctcggttctggtgttcgcctcctgtca
ggtggtaagatgctgcagatttccagagtacagcagcgggatgcaggacagtatgtctgc
acagcgaccagctcagcaggacaggaccagaagagcatcatgctgaacgtttatgctcca
cccactctgctcccgctgccacactcagtgtcagaggtcatgacccctcagatagggtca
tcagttacactgagctgtgaggcgcgaggtgttcctgagcctgaggtcacatggtacaga
aatggccagaagctgaactctgggagaaccctacagcttgccagtcagaaactgacaata
aacagcatgcaggtgtctgatggaggagtttatacttgtaaggtgtctaaccctgcaggt
cagctggagagaaagtttatgttaacagctcatgttacagcgcctcttgtaattgaagga
ccagttcatgagagcgtcacacacactctgggttctcatattactctggtttgtgacgca
agcggagttcctgctccaaatatgcgctggctaaaagacagcttggcttttggtagtggt
agtgtgttgtctttaggtccactggaactttcacacagtggtgtttacacctgcattgct
cacaacagcaaaggagaaacacacaaaaactacacactcaccatccaggtgcctcccacc
atcttgaattcaggtccatctgatgtcagtgccctggtgggggcggagctgacattaaag
tgtcatgcagagggcacgcccactccacagctcgcttggatgagaaatggagtgaaactc
gacaacactgagcatgtgcacgtctctgcaaatgggagcacattaacactcctgagtgtg
aaagaggaagatgctggaacatacacgtgtttagccatcagtcccgctggacaggaaagc
aaaatctacactctgtttgtgctggtccctccctccatactgaaacactctgacgtcccg
ctggatgttcaggctgttcatgacggtgttgtgtctctggagtgtcatgcagtcggcatt
cctcctcctcagatcacctggctgaaagacggaaatccactgcagctcacaccccgaaca
cacctgcactccacacacacactcctcaggatctctccggtgcaactctctgactctgga
ctttacacctgtgtggctcgcagtaaagcaggatttgcagaacagaaattccacctgcag
gttgaagcccctgccatggtggagcacactgagccaatggagcacattgtgatagttcga
ggctccgtggtgaccctggtgtgtgaggctcatggtgttccccctccaaccctaacctgg
atgaaggacagtgagccgctctcactccaccagaacatgatgcttcatgatggtggagaa
actcgcttccagctgctggacgttcagcttgaggatgctggtctttacagttgcactgca
aagaaccaggctggaaccagcaccaagaccttcaacctcacagtgttagagcctcctaag
atatccagctctctgagaagagaggagctgatggtggtggtggacggcgttttggagttg
gagtgtgttgctgatggagttcctccacccactgtaagctggatgaaggatggacgtccc
ctagaggacagcagagttgtattacacagagatggacagattctcaccatcagcaacatt
caggtggaggatgcaggtgtgtacacgtgtcttgtcagtaacctggcaggagaagacggg
aggagtctctgggtgcgcgttcagcttccacccacactactgggttctagtgatatcaga
actgtgtctgtgcccttgaagggtcatatgaccttggagtgtcggacagacggcgagctt
ccaccggagattgagtggtacagagacaacattaaactgcagttgagtggtcggatccag
agcattgccggtggtcagtatttagagattggagatgtgaggaaggaggacggtggactt
tacagctgtgtcgtatccaacatggctggcagctcaagtctgcactttaatgtacagatc
ctcttgccccctgtcattagagaaggaagcccactggtcaccgcacatgtcaatcagaag
gtgttgctaccttgtgaggtggagggagactccgccccctcagtgttatggaggaaagat
ggagtcccagttctgtttgacaacaggtttgttttgcttccggacggatcagtgcgaatc
gagtcaacgcaactcacagacgcaggccgttattactgcagtgtgtctaacgaggcaggg
tcagaccagcgcagcatggagctccgagtttatgtcggtccctccattagccccggccct
ttgaacgtaaccgtgacgatgggccagagggctgttttaggctgtgagagtttaggcgta
cctgttcctcaggtgagctggaagaggaatggccaagcactgaatacacactctggagct
tacaggttgatgccttcagggtctctgctcataatttctccatctcttgaggatgaagga
tattttgagtgcacagtgaccaatgaggttggagaggagcaaagggtcatagaggtcatg
cttcaagttcctccatccattgaagatgatgtcaccagtgttacagccattaagatggag
tcagtggtattaccatgtcacgtcacaggacgtccaacaccatccatcagctggagcagg
ggagggacagcactgggcacaaggaggggcagttacaggaccctgcccacaggtatgtta
gagatactggctgtgaatccaacccatgctggcagatacacctgcagtgcacaaaacaca
gctggagtcgcacggaaacacatcattctgtctgtacacgaggctcctgagataaggaac
atggttaaagaagtgaatgtgctgctgaatcaggaagttgttttgatctgtgatgttcac
ggattccccaaaccttcggttacctggcttaaagagggtgttcccatagcaaaaggtcag
cgcctggtggttctgtctgatggatctctgagactttctcaggttacgctggatgatgca
ggaacatattcttgtctggcacaaaatgcagctggcaccacagagggcaaaactcaactc
atcctgcaggttcctcctgtcatttctgtacctcatgatgaatatacactcagtgttggt
gagtctgtcagtgtgccgtgttcagcgattggtcagccggagcccgagctgcaatggcac
aaattgggtggtgctgtgaggggcagagcaaacctgttgactttcaccaatggaacactg
cacatcaaaaatgcacaactcaaacatgctggggtttacacgtgcacagccttgaacagc
gcagggagagcaagccgtgacatcacactgattctgcatgttccgcccatgatccttgtt
ggtcagtcggaagtgtctgtcatccagggcttccagagtctactgccatgttcagctcaa
ggagttccagaacccaaaattcactgggagaaaaacggagacattatccagaacctgcgg
ggaaaatttactgtcctgagatcaggagagctaatcattgagagaacccagccctcagat
gcaggtgtgttcacttgtgtggccatgaatgcagcaggttctgcgcatcacaaagtccag
ctgtctgttaacacgaggccagagtttaaggagtcaccaagcgacatgacgctgagggtg
gggcaaaatctgacccttacctgccacgcccactctacccctccccctgtcatcacctgg
actgttaatagtcgtccctatactggattcagcgtggatgaagcaggtcggactttcctg
atgattgggaatgtaacagtgagggactcgggatcgtacgtgtgtacagcggagaacagc
gtcggctctatccgagcgttagcattcgtccgcgtcacagagcctccagttctgagagga
gatggccatgtgtctcagtttgtctctcgtggtgcagtagttgtgttggattgtcctgtt
agaggaactccagctccggtgttgcgctggtttaaagatggccacctgctgaaggtcact
gagcatcttcatcgtctccctaatggctctcttgttctttacagtgccatgagcagagat
tcaggagagtatcagtgtgttgctgaaaatgaggtgggagttataaagaggacgatatct
ctgaaagtacaggttgcaggcggttactctcactgggagcagtgggggccctgcagtgtc
acatgtgggcatggcctccaacagcgaaccagattttgcaataacccatcaccaaccaat
gggggagcagcatgtgagggtccagatattgagtcaaagcagtgccaagcatctttatgt
tcaggagactctctccgcagggcacgtgccagtgtgatcgggatggtgaatgatcgggag
tttggtgtttctttccttgaagtgaacatcagtgagaactcaaagcgcagaagcagcaca
ctggaggctcacatggagaacgttcctcccagtgtgggtcctttgctgaaagttcttgta
tctgctttgactccgatttactggacggctgtttatgaatcagcaggaacaaagaacggc
ttctccatcagccgcgggaatttcagacaagaatcccaactggagtttcacacaggagag
atcttaaagatgacccacgtggtgagaggtgtggatgcagagggagttttgctagtcgac
gtggtcattaatggatttattcctgcagtgtttttatccccagtgctacatcagcatgac
tttgatgagacatacgtgcaggtcggctctggtcagatatactcctggtctacccagaat
tctttgcagcaggatgtcgactctgtgctgactctgcgctgtaatcactcgctggtgttt
gatggatcggtgaaacgttttgctcctctgctgcagcagatccgtctgtcagacataagc
agctcctacaacatgcttaacttcaggctggactttcacatcacagccatgttatcactg
ccagatggtgatggagagaaatgtccagaaggattcttgctggataaagcatcttactgt
gctgatgaggatgagtgtgtgtcagattctccatgttctcactcctgcattaacatcatg
gggagcttcaggtgcagctgtccatcaggattcaacctcaacacggagagcaacagctgc
caagatatagatgagtgtgtggatggatctcacatgtgcctctataaccagttgtgtgtg
aatacagttggaaaatatcggtgtgaggtgaagtgtgggccaggattcagacacagaact
gctggtactgagaacagaacaagaattgaaggctgtgaagatgtggatgagtgtgtggag
tcgtctgtgtctccctgccagcatcagtgctttaacacactcggctccttccgctgcggc
tgcctgcctggataccagctggtgggacatcgctgcttcgatataaatgagtgtttgagg
agtgtatgtccatctcaccagcaatgcaagaatacagatggaggatatcagtgttttgac
aactgtccatcaggaatgactcaggctgaaagcggtgtgtgtgtggatgtagacgagtgt
aaagacggcagtcacatgtgtcgctacagccagatctgccaaaacacactcggtggttat
ttgtgtgtgtgtccaagaggctaccgttctcagggtgtgggcaaaccgtgtgtagatgtt
gatgagtgtgcacagtctccaagtccgtgtgggtatcagtgccgaaacgtgcctggtagt
ttccggtgtttgtgtcccccgggaactgtcctgctggtggatggccgctcgtgtgctgga
cttgagagaggaaatgggttcagtaatcgaacttgggttcgagttggacttcagcctcag
ctggtgtccacaaggggtcaaacactaacgttgctacagaacacacagccgggggcaccg
tggaacaacttgcacacctgcccacctggttatacaagtaaagccagtagctgtgtggac
attgatgagtgtgcactcagaaagccttgccaacacgagtgccagaactcagtgggaagt
tttcagtgtttttgcccttcaggatatcagctgatgcctaatggtcaaacatgcagagat
attgatgaatgcattgagcacagtgtgcagtgtggaccaaaccaaatgtgctttaacatg
agggggagttatcagtgtttggacactccctgtcctgccagctatcgtagaggaggaagt
ccaggtgtgtgttacaagccatgttcacatgggtgtgctgaaggatcttctctcctcctt
cagtataaactcctcacacttcctctgggaattccagctcaacacaacgtcatccgatta
tcagcgttttccgagtctggtgttcttcaggagcgaacattattcgccatcctggaacaa
agtggagagattacagagcagctgtttgggattaaagacgaggctggaagaggaatcatc
tttaccactcactatttaaatcagtctggtctggtgaagctgaaggtccaagctaccacg
ttgaaccagcatggacaaatcacttaccagagtttattcatcatctacatctccatttct
gcttatccatactga
DBGET
integrated database retrieval system
