Pangasianodon hypophthalmus (striped catfish): 113525736
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Entry
113525736 CDS
T05759
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04150
mTOR signaling pathway
phyp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113525736
04150 mTOR signaling pathway
113525736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113525736
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113525736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
EGF_LRP2
SGL
cEGF
DUF5050
Motif
Other DBs
NCBI-GeneID:
113525736
NCBI-ProteinID:
XP_026768127
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MGLKATKVSEMFGTNGCTESNGGCSHLCFNGPRGLTCACPMGLELLSDLRTCVVPEAFLL
FTTRAEIRSISLGTNSNDVAIPLSGVKEASALDFDVAENRIFWTDVNAKTISRAFMNGSG
VEAVIEFGLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLAL
DPANGYMYWTEWGGRPRIACAHMDGTNIITLVDKVGRANGLTIDYVDQRLYWTDLDTCMI
ESTNMQGLQREIVADDLPHPFGLTQYRDFIYWTDWNLRSIERADKRSGQNRTLVQGQLEY
VMDILVFHSSRQDGSNQCSHNNGHCAHLCLASPSGAQCRCASHYTLQPDGHNCSSPSSFL
LFSQKSSISRMVLGEQSPDMILPIHVMRNLRAISFDPLKRFIYWIDGKQSIRKARDDGSQ
AATVVSPGPTQPLKQPHDLSLDAFSRTVYWTCENTNTINVQRMDGQIIGEVVRDDVDKPR
AIVVNAEKGYMYFTTLQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVD
ADLKRIESSDLSGERESVLHFLAPQAGGAQTPHACVDKHEKRRACCVYAACVNPPTCSAD
HFTCATGEIDCIPMAWRCDGIAECADHSDEMNCPVCSEQQFQCHGGQCLDVKLRCNGEQD
CTDGSDEHDCHTICMPNQFRCKNNKCISKKQQCDSYPDCSDDSDELFCDFPPPSGDERHT
NTIGPVIGIILSVFVLGGMCFVCQRVVCRRYKGPSGGFPHDYITGTAHVPLNFISTNNTQ
HANCTGISCGKSIVSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKAAFYPQILNPPPS
PATDRSLYNTEVFYSSNSPSTTRSYRPYVMRGGAPPTTPCSTDVCDSDYTPSRWKSNKYY
MEVNWDSEPCPPPPTPRSHYLSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcaaagccaccaaagtctctgagatgttcggcactaacggctgcactgagtcc
aacggcggctgcagtcacctgtgtttcaatgggcctcgcggtctcacgtgcgcgtgtccg
atgggtctggagctcctcagtgatctgcgcacgtgcgtcgttcctgaagcgttcctgctc
ttcaccacccgcgccgaaatccggagcatctcgctgggaaccaacagcaacgacgtggcc
atcccgctcagcggcgttaaagaggcctcggcgcttgacttcgacgtcgcagagaaccga
atcttctggactgacgttaacgccaagacgatcagccgcgcttttatgaacggcagcggc
gtggaggcggtgatcgagttcgggctggattatcccgagggcatggccgtggactggatg
ggcaggaacatctactgggccgacaccggaaccaaccggatcgaggtggcccgtctggac
ggtcagtaccgccaggttctggtgtgtaaagacctggacaaccctcgctcgctagcgctg
gatccggctaacgggtatatgtactggacggagtggggcggtcggccgcgtatcgcctgc
gctcacatggacgggaccaacatcatcactctggtggataaagtgggtcgagccaacggt
ctgaccatcgactacgtggatcagcgactgtactggaccgacctggacacgtgcatgatc
gagtccaccaacatgcagggcctgcagcgtgagatcgtagccgatgatctcccgcacccg
ttcggtctgactcagtaccgggactttatctactggacggactggaacctgcgcagtatc
gagcgagcggataagcgcagcggtcagaaccggactctggtgcagggacagctggagtac
gtcatggacatcctggtgttccactcgtctcgacaggacggatccaaccagtgctcacac
aacaacggccactgcgctcacctgtgcctggcctctccgtccggggcacagtgtcgctgc
gcctctcactacacactgcagcctgacggccacaactgcagctctccctccagtttcctg
ttgttcagtcagaagagttctatcagtcggatggttttgggagagcagagcccggatatg
attttgccgatccatgtgatgaggaatctgcgagcgatcagcttcgacccgctgaagcgc
ttcatctactggatcgacgggaagcagagcatccgcaaggcccgagacgacggctctcag
gcggcgaccgtggtgtctccgggcccgacgcagcctctgaagcagccgcatgatctgagc
ctggatgcgttcagccgcacggtgtactggacctgcgagaacaccaacaccatcaacgtg
cagcgcatggacggacagatcatcggggaagtggtgagagacgacgtggacaaacccaga
gccatcgtcgtcaacgccgagaaaggctacatgtacttcaccacgctgcaggatcgctcg
gcgaagatcgaaggcgcgtctctggacgggacggagcgcgagtctctgttcacgaccggt
ttgatccggcccgtggcgctcgctctggataacaaactgggcaagctgttctgggtggac
gcggatctgaaacgcatcgagagcagcgacctgtccggtgagcgagagtccgtcctgcac
ttcctcgctcctcaggcagggggcgctcagacgccacacgcctgtgtcgataaacacgaa
aagcggcgagcgtgttgtgtttacgcagcgtgtgtgaacccgcccacgtgctcggccgat
cacttcacgtgcgcgacaggcgagatcgactgcatcccgatggcgtggcggtgtgacggc
atcgccgagtgcgctgaccacagcgacgagatgaactgccccgtgtgctcggagcagcag
tttcagtgtcacggtggacagtgtctcgatgtgaagctgcgctgcaacggggagcaggac
tgcaccgacggctccgacgaacacgactgccacaccatatgcatgcccaatcaattccgc
tgtaaaaataataaatgcatctcgaagaagcagcagtgcgactcgtaccccgactgctca
gacgactcagatgagcttttctgcgatttcccaccacccagcggtgacgagcgtcacacc
aacaccatcgggccggtgatcgggatcatcctgtcggtgttcgtgctgggcgggatgtgc
ttcgtgtgtcagcgtgtcgtgtgtcgccgctacaaagggccgagcgggggattccctcac
gattacatcactgggaccgcccacgtccctctgaacttcatcagcaccaataacacgcag
cacgctaactgtacaggtatatcgtgtgggaagtccattgtgagctcggtcagtctgatg
ggcagcagcagcagtggagctcctctatacgacaggaaccacgtgactggagcttcatcc
agcagctcatccagcaccaaagctgccttttaccctcagattctgaatcctcctccgtca
ccagccacagatcgctcactctacaacaccgaagtgttttattcgtccaacagtccgtcc
acgaccaggtcttacaggccttacgtgatgcgtggcggggctccgcccaccacgccctgc
agcacggacgtgtgcgacagcgactacacgccgagccgctggaagagcaataagtactac
atggaggtgaactgggactcggagccgtgcccacccccgcccacgccacgcagccactac
ctgtccgccgaggagagctgtcctccatcaccctccaccgagcgcagctacttccacctg
tgtccacctccaccctcgccctgcaccgactcatcctga
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