Pangasianodon hypophthalmus (striped catfish): 113525762
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Entry
113525762 CDS
T05759
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113525762
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113525762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113525762
NCBI-ProteinID:
XP_026768152
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MNMYSILDHELKSPLQHAPVTMPPADGSVHASSTPAAAGGQKSSECLDKVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKLLADAQKRPFIDEAKRLRALHMKEHPDYKYK
PRRKTKPAAKKDCPVSALPLSAGTLSGSARMEGYGWGAAGGYGSAQGDALGYTQQIHRYD
LSSFQYPSAHSYMNSASAYSPVQYGTAGTQQSSPVMSVVKPDQVSPSSSGGDLNQPRAPL
QPDLRDMISMYIPSGSGDTGDAQRNYTANLQQHYLTGSASLTHI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtacagcatcctggatcacgagctgaaaagccctcttcagcacgcgcccgtc
acgatgccgccggcggacggaagcgtgcacgcgagctccacaccggcggccgcgggcggc
cagaagagctccgagtgtctggacaaagtgaagcggcccatgaacgccttcatggtgtgg
tcccgcggccagaggcgcaagatggcgcaggagaacccgaagatgcacaactctgagatc
agcaagcggctcggcgcggagtggaagctgctcgcggacgcgcagaagcggcccttcatc
gacgaggccaagcggctgcgcgcgctgcacatgaaggagcatcccgactacaagtacaaa
ccgcggcgcaaaaccaaacccgctgccaagaaggactgtccggtgagcgcgctcccgctg
agcgccgggaccctgagcggaagtgcccggatggagggttacggctggggcgcggcggga
ggatacgggagcgcgcagggggacgcgctcggctacactcagcagattcaccggtacgac
ctgtcgagcttccagtacccgagcgcgcacagctacatgaacagcgcgagcgcgtacagt
ccggtgcagtacggtaccgccggtactcagcagtccagcccggtcatgtccgtggtgaaa
ccggatcaggtgtctccgtcctcgagcggcggcgatctgaatcagcctcgcgctccgtta
cagccggacctgagggacatgatcagcatgtacatcccgagcggaagcggagacaccgga
gacgcgcagaggaactacacggctaacctgcagcagcattacctcaccggctccgcctcc
ctcacacacatctga
DBGET
integrated database retrieval system
