Pangasianodon hypophthalmus (striped catfish): 113525876
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Entry
113525876 CDS
T05759
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113525876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113525876
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113525876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Motif
Other DBs
NCBI-GeneID:
113525876
NCBI-ProteinID:
XP_026768297
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MIAEPTLLSRTVQKENTSVDVSSCTSVNHASGVRNENRKKNVRGKRKARDGSENAKQKLS
KTSHGTLGRAENEQLKHGDMEAFTLFEVVTMGRSAMQAVVDDWIEAYGMDREPALLDLIS
FFIQCSGCKGVVTAEMFQSKEDSDVMSKMVEDLDESSGLQYKRFLAFPWILTVTWPMDIE
NGEYPLVMSGLYWKKFRSHFCEFVSVLISQCQYSVIFDNYLLNTLISLLTELSASHMRAF
RHTCTLAAVKLLSALVNVALNLSISVENNQKLCEVELAKMSSKRASPRLDKIQKKITELK
DRKLEIEDMMDAIFKGVFLKRYRDVIPEIRAICIEELTIWMKLYSAVFLNDTCLKYVGWM
MHDKQPDVRLKCVLGLQGLYQDVNLSSKMDLFTSRFKERMISMTLDKDHEVAVQAVRLLM
AVAQSCDDVLSQADYKHIFQFVYSTHRPIATMAGEFLFTKLLSKPAVTVMRAGASEEDRH
RELTLARLRALIQFHTENQLHQHVLYLVDSLWDSGGSLLKDWAFFTSLLTAQPSSLEQAL
SSTEEALVIEILSASVRQAAEGPPLAGRSTGKKVISTKEKRLQTDDCAKLTEHFLKVLPD
LLSKYSEDAEKLTSFLKIPQYFQMDACGDEYTESVQALLTGLEAAVDSHTEAALLEAAVR
SYHNLCANDSHWQHLAASAIGQLNQRWTHTLESCLGEAVIDGTFIGDGDKKEEILSTLKK
LTAFNNAQDLTKWGTYELVSKLLVVELEHGGVPVEMITEALRCVCCCILWNLNNFGEGVT
SRESALRQRSQLRAFCEKCHRYLSHTEQVVREQAFMCLSDVLVAHSYQLQMWDSSAGAPL
LYTPEPRLQKALLSFILEHVFTSPEPHGHSSTGSETKGGVTWLEDLHKRRNLLAAYCKLI
VHSVLEMSMAAEIFKHYMRYYNDFGDIIKETLNRTRQMDKIESARTLVLCLQQLYLRLKQ
EQDTGSVCSSEVQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIEFVFQGFVQQSE
KHSPPYLSYLTILSEFSSKLLKPDKKTIYSYLQRYTGEQSISNREECWMPLIYYRASLQG
TAEGEDAVSFISSDTNKQLSLSNRSRSPSTKPAASEGELRISQACTENKGSKQLKSQELR
VAEQFAVLREQPESRGTVDIQPGVTAEEVDVDTIEIDI
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaaccaaccttactctcgagaacagtgcaaaaagagaacactagtgttgat
gtctcttcctgcacatctgtgaatcatgcctctggtgtgagaaatgaaaacagaaagaag
aatgtgagagggaagaggaaagcccgagatggctcagagaatgctaagcagaagctctca
aagaccagccatggtaccctgggcagagcagagaatgagcagctcaaacatggagacatg
gaagccttcaccttgttcgaggtggtcactatgggcaggagcgccatgcaggctgtggtt
gatgactggattgaggcttatggtatggacagagaaccagccctgcttgacctcatcagc
ttcttcattcagtgttcaggatgcaaaggggtagtaactgctgagatgtttcagagcaag
gaagattcagatgtcatgagcaaaatggtggaggacctggatgagagctcaggtttgcag
tataaaaggtttctggcgtttccatggatactgactgtaacatggcccatggacattgag
aatggcgagtatcctcttgttatgtctggtctgtactggaaaaagttccgctctcacttt
tgtgagtttgtctcagtgctgatatcacagtgtcaatatagcgtgatctttgacaactac
ctcctgaatacactcatctctctgctgactgagctctcagcatcacatatgcgtgccttc
agacacacgtgcacactggcagcagtaaagttgctcagcgctctagtgaatgtggcactc
aacctcagcattagtgtggagaacaaccagaaactctgtgaggttgagctggccaagatg
tccagcaagcgagcctcaccacgcctggacaagatccagaagaagattactgagttgaag
gatagaaagcttgaaatagaagatatgatggatgctatttttaaaggagtttttcttaaa
agatacagagatgtgatacctgagatcagggctatctgtatagaggaactgactatatgg
atgaagctttacagtgcagtgtttcttaatgatacctgtctgaaatatgtaggatggatg
atgcatgacaagcaacctgatgtgcgcttgaagtgtgtgttgggtctgcagggactttat
caggatgttaatcttagctccaaaatggaccttttcaccagtcgatttaaggagagaatg
atctccatgaccttggataaggaccacgaggtagcagtgcaggcagtgaggctgctgatg
gccgttgcccagtcatgtgatgatgtgctgagccaggctgactacaagcacatatttcag
tttgtatactctactcatcgaccaattgcaaccatggcaggggaatttctcttcaccaag
ttactcagtaaaccggcagtgacagtgatgagggcaggagcatcagaggaggacagacac
agagagctcaccctggcccggctccgagcccttattcagtttcacactgagaaccagttg
caccagcacgtgctgtatctggtggacagtctgtgggatagtggtgggtctctgctgaag
gactgggcctttttcacctctctgctcacagctcaaccttcctcattggagcaagctttg
agcagcactgaggaagctctggtgattgagattctttcggcgtcagtgaggcaggctgct
gagggacctccactagcagggagaagcactgggaagaaagtgatcagtacaaaagagaag
aggttacagacagatgactgtgcaaaacttacagaacacttcttaaaggtgctacctgat
ctgttatccaagtactcagaagatgctgaaaaacttacatctttcctcaaaatacctcag
tactttcaaatggacgcctgtggcgatgaatacacagagtctgtgcaggcactactcact
ggtttggaggctgcagtggattcacacacagaggcagcactactagaagcagctgttcgc
tcataccataacctctgtgcaaatgattcacactggcagcacctggcagcttctgccata
ggccaactcaaccagcgctggacacacacactggagtcatgcttaggagaggcagtcatt
gatggaactttcattggagatggagacaaaaaggaagaaattctgtccactttgaaaaaa
ttaactgctttcaacaatgctcaggacctgactaaatggggcacatatgagctggtctca
aagctccttgtagttgagttagagcacggaggtgtgccagtagagatgatcactgaggct
ctgcgctgtgtctgctgctgcatcctgtggaacctgaacaactttggagaaggagtgacc
tccagggagtcagctctccgtcagagaagtcagctacgagctttttgtgaaaaatgccac
cgatatctttcacacacggagcaggtggtgagagagcaggcatttatgtgtttgagtgat
gtcctcgtagcccacagttaccagctacagatgtgggattcatcagcaggtgctcctctg
ctctacactcctgaacccagactgcagaaagcgctgcttagcttcatcctagagcatgtc
ttcaccagcccagagccacacggccacagcagcactggcagtgagactaagggtggggtg
acctggctggaggacttgcacaagcggaggaatctgttggctgcctactgtaaactgata
gtgcacagtgtgcttgagatgagtatggctgctgagatcttcaagcactacatgaggtac
tacaatgactttggcgatattatcaaagaaactctgaaccgcacccgacaaatggacaag
attgaaagcgcacgcaccctggttctgtgccttcagcagctgtacctgcggttgaagcag
gagcaggacacagggagcgtgtgcagttcagaagtgcagacctacagcagcatcaaagag
ctggccagacgcttctcgctcaccttcggctgggatcagatcaaatcccgcgagtctctg
gccatgatccacagggatggcattgagtttgttttccagggttttgttcagcagtcagag
aagcactcgccgccgtacctctcttacctcaccatcctcagcgagttctccagtaagctg
ctcaaacctgacaagaagaccatatatagctatctgcaacggtacactggtgagcagagc
atcagtaacagggaggagtgctggatgcctctcatctattacagagcgtctctccagggc
acagctgagggagaagacgccgtgtccttcatcagctctgacactaataaacagctctca
ctcagtaatcgttccagatcgccctccaccaaaccggctgcatctgaaggagagctgcga
atctcacaagcgtgtacagaaaataaagggagcaaacagctgaaaagccaggagctgaga
gttgcagaacagttcgctgtactcagagagcagcctgaaagcaggggaacagttgatatc
cagccaggggtcactgctgaggaagtggacgtggacacaatagaaatagacatttga
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integrated database retrieval system
