Pangasianodon hypophthalmus (striped catfish): 113525974
Help
Entry
113525974 CDS
T05759
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145
Phagosome
phyp04148
Efferocytosis
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
phyp04810
Regulation of actin cytoskeleton
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113525974 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113525974 (itgb5)
04148 Efferocytosis
113525974 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113525974 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113525974 (itgb5)
04810 Regulation of actin cytoskeleton
113525974 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113525974 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113525974 (itgb5)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113525974 (itgb5)
Cell adhesion molecules [BR:
phyp04515
]
Integrins
Integrin beta subunits
113525974 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
113525974
NCBI-ProteinID:
XP_026768485
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MWSFQLGGHLAVLLAGIILHIWIHTARGVNVCVSGSATSCEECLLLHPSCAWCAQENFGR
GRTFMSQCDLSQNLLKRGCKAHYIENPRSITSILKNKPLSSKGSMSAQYDVIQIQPQKIS
LSLRPGHPTSFEVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMKKLTSNF
RLAFGTFVDKNLSPFSYTAPKYKENPCNGYKPFPNCVPSFGFRNHLSLTDKVDRFNEEVQ
KQVVSRNRDAPEGGFDAILQAAVCKERIGWRKEAYHLLVFATDDVPHLALDGKLAGLVQP
HDGQCHLNDANEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNFTALIPGT
TVEILDQSSKNIIQLIVTAYNNIRSKVELSVWDHPEDLSLAFTATCQDGKPLSGLSKCAD
LKIGDTVSFNISVAAHSCPPPGTQKSFTIKPVGFKDSLEVSVDYQCGCNCTRYAQANSNH
CSSAGTYTCGTCHCEPGYHGTNCECEEEEVGSLNLAACREAKGKQVCSGRGECSCNYCRC
YESEFGKIYGKYCECDDFSCARHKGILCSGHGDCHCGECKCHAGYVGDNCNCSIETTGCV
SEDGRMCSGRGSCVCGRCQCTEPGAFGDLCEKCPTCGDACAAKRECIECTLFNTGKFADN
HTCQRMCKDKIIVTETLDTDDPSTVLCLYKTENECVMKFTYSEHASGQSILTALHEPVCA
APPDAMTVLLAVVGSILLVGIVLLAMWKLVITIHDRREFARFQSARSRARYEMASNPLYK
HPISTHSVETAFQMHSKSYNGGLH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtggagttttcagcttggtggccatctcgcagttcttttagccggcattattctgcac
atctggattcacacagccagaggtgttaatgtgtgtgttagtggcagtgccacatcatgt
gaagaatgtctactgcttcacccgagctgcgcctggtgcgcccaagagaactttggaagg
ggaaggacattcatgtcacaatgtgatttgagccagaacttgctgaaaaggggctgcaag
gctcattatattgaaaacccaaggagtatcacttccatcctcaagaacaaacctttgagc
tccaaaggctcaatgtctgcccagtatgacgtcatccagatccagccacagaagatttca
ctcagtctaaggccgggtcatccgacctcgtttgaggtgcaggtccgccccgttgaggat
tatcctgtcgatctgtactacctgatggacctctcgctatccatgaaggacgacctggat
accattcgcaacctgggaacaaaactggctgaagagatgaagaagctcactagtaacttc
cgtcttgcgtttgggacgtttgtggataagaacttgtctcctttttcatacacagctccc
aagtataaggagaacccctgcaacggatacaagccattcccaaactgtgtcccctccttt
gggttccgtaatcacttatctctgactgacaaagtggaccgtttcaatgaggaggtgcag
aagcaggtggtgtcacggaacagggacgcgcctgagggtggatttgatgctattctacag
gctgccgtctgcaaggagagaattggttggaggaaggaggcctatcacctgctggtcttt
gctacagatgacgtaccccaccttgctttggatggcaaactggcaggcctcgttcaacct
catgatggacagtgccacctgaatgatgcaaacgagtacagtgcttcaaccaagatggac
tacccttcattagctcttcttggagagaagctggctgaaaacaacattttcctgattttt
gcagtgaccaaaagacattatgttctttataagaacttcactgcattaattccaggaact
acagtggagatccttgaccaaagctcaaaaaacataatccagctgatcgtcactgcctat
aataacatccgctctaaggtggagctgagtgtatgggatcatcctgaggacctcagcctg
gccttcactgccacgtgtcaagatggcaagcctctttcaggcctgagcaagtgcgctgat
ttaaagattggagacacggtctccttcaacataagcgtggctgcccatagctgtcctcca
ccaggcacccagaagagtttcaccattaagcctgtgggctttaaagatagtctggaagtc
tctgtggattatcagtgtggttgcaactgcacacgctacgctcaggccaacagcaaccac
tgtagctctgcgggcacctacacatgcggcacatgccactgtgaaccgggctaccatggc
accaactgtgagtgcgaggaggaagaagtaggcagcctgaacctcgccgcctgccgtgaa
gctaaaggcaagcaggtgtgcagtgggcgcggggaatgcagctgtaactactgccggtgc
tatgagtccgagtttggcaaaatctacggcaagtactgcgagtgtgatgacttctcctgc
gctcgccacaagggcattctttgttcaggtcatggtgattgtcactgtggggagtgtaag
tgtcatgctggctatgttggagacaactgtaactgctcaatagaaacaactgggtgtgtc
tccgaagatggcagaatgtgtagcggacggggcagctgtgtgtgcggccgctgccagtgc
actgagccgggggcatttggggacttgtgtgagaaatgccccacctgcggtgacgcctgt
gctgcaaagagggaatgcatcgagtgcaccctcttcaacacggggaaatttgcagacaac
cacacctgccagcgcatgtgcaaggataagatcattgtcacggagactctcgatacggac
gacccaagcactgtactgtgtttgtataagactgagaatgaatgtgtgatgaagttcacc
tactctgaacatgccagtggccagtcaatcctcactgctctgcatgagccagtgtgtgct
gctccccctgatgctatgacagtgctgcttgcggttgtgggcagtatcctgctagtgggc
attgtgctgttggccatgtggaagttagtaatcaccatccacgaccggcgcgagtttgcc
cgcttccaaagcgcacgctcgcgagcacgatatgagatggcctccaatcccctctacaaa
catccgatatccactcactcggtggagacggcattccagatgcacagcaagtcatataac
ggaggacttcactga
DBGET
integrated database retrieval system
