Pangasianodon hypophthalmus (striped catfish): 113526032
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Entry
113526032 CDS
T05759
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00100
Steroid biosynthesis
phyp01100
Metabolic pathways
Module
phyp_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
113526032 (lss)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
113526032 (lss)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-GeneID:
113526032
NCBI-ProteinID:
XP_026768586
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MTEGTCVRRRGGPYKTTAVTDLTRWRLSNVEGRQTWRYLKDEDTKEREQNFLEAHSVGLD
TSKFVPASPAAHTVVEAAQKGMEFYSLLQAEDGHWAGDYGGPLFLLPGLLITCHVAKISL
SEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTTLRILGVGPDDPDMVRARNN
LHSQGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPTWMPAHPSTLWCHCRQVYLP
MSYCYAIRLSAQEDSLVRSLRQELYVQDYSTINWPAQRNNVAASDMYTPHSTLLTAIYPI
LNLYEAHHSTALREKAVKELYDHVQADDRFTNCISIGPISKTINMLVRWHVDGPTSAAFQ
EHVARIPDYLWLGLDGLKMQGTNGSQLWDTAFAVQACLEAGAQTDPRFTQCLMKAHQFFN
LTQVKENPPDYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCSFITEHIP
SQRLFDAVNVLLSMRNSDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALQHFHHAYPEHRAQEIRSTLQQGLDYCRRMQRPDGSWEGSWGVCFTYGVWFGLEAFACM
GHVFQDGYDGLVCAEVRRACDFLLSKQMEDGGWGEDFESCEQRCYIQSKTSQIHNTCWAL
LGLMAVRYPDTTVIERGIQVLIDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPVWTL
GRFSRLYPSSSLARNLGGTER
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagggacgtgtgtgcggagaagagggggtccctataagactacagcagtgaca
gacctgactcgctggaggctcagtaatgtggaaggaaggcagacatggagatacctgaag
gatgaagacactaaggagagggagcagaatttcttggaggctcactctgtgggtcttgac
acgagtaagtttgttccagcctccccagcagcacacacagtggttgaagctgctcagaag
gggatggagttttacagccttctccaggctgaagatggccactgggctggagactacgga
ggaccacttttcttgcttccaggtctcctcataacctgtcatgttgctaaaatctctctg
tcagaagcctggaagaaggagatggtgaggtatctacgttcagtgcagctgccagatggt
ggctggggtctgcatatagaagacaagtcgactgtatttggcacagcgctcagttacacc
acactgagaatcctgggagttgggcctgatgacccagatatggtgcgggcaaggaacaac
ttacacagccaaggaggtgctgtaggtataccgtcctggggaaagttctggttggccatc
ctcaatgtctacagttgggaagggatgaacacgctctttccagagatgtggctgtttccg
acttggatgccagcgcacccatccactctgtggtgccactgcaggcaggtctaccttccc
atgagctactgttatgccatcagattgtctgcacaggaggactcgctggtgcgcagcttg
agacaggaactgtatgtccaggactattcaactattaactggccagctcaaagaaacaat
gttgcagcatcagatatgtacacccctcacagcactctgctcactgccatctaccccatc
ctgaacctatatgaggctcatcacagtactgcactgagagaaaaagctgtgaaagaactg
tacgatcacgtgcaagcagatgatcgcttcacaaattgcattagcatcgggccgatctca
aaaaccattaatatgttggtgcgctggcatgttgatggacccacgtcagctgcctttcag
gaacatgtggcgaggatcccagactacctctggctaggtcttgatggtttgaagatgcag
ggaaccaatggatctcagctatgggacactgcctttgcagtacaagcatgtcttgaggca
ggtgcacagactgaccccaggtttacacagtgtttaatgaaggcccaccagttctttaat
ctaacccaggttaaagaaaatcccccagactacaagaaatattacagacaaatgaacaag
ggaggctttcccttcagcacacgtgactgtggttggattgtagctgactgtacagcagag
ggcctgaagtcagtgatgttactgcaggagcagtgcagcttcatcacggagcacattccc
tcacaaagactctttgatgcagtcaatgtgcttttaagcatgagaaattctgatggtggc
tttgctacatatgagaccaaacgtggaggaaaactgctggagctgctcaacccgtcagag
gtgtttggtgatatcatgatcgactacacctatgtggagtgcacatcagctgtgatgcaa
gctctgcagcacttccatcatgcttatcctgagcacagagcacaggagattaggagtact
cttcagcagggacttgactactgcagaaggatgcaaagacctgatggttcatgggaagga
tcatggggtgtgtgctttacatatggagtatggtttggattggaggcgtttgcgtgcatg
ggtcatgttttccaggatggatatgatggactggtgtgtgctgaggtgaggcgtgcctgt
gacttcctgctttctaagcagatggaggatggaggttggggagaggactttgagtcgtgt
gagcagaggtgctatatacaaagcaaaacttcccagatccataacacctgctgggctctg
ctgggtctgatggctgtcaggtaccctgacaccacagtcattgagcgtggaatacaggtt
ttgattgacaagcagcttcccaatggagactggccacaagagaacatctctggtgtattc
aacaagagttgtgctatcagttacacatcgtatagaaacgtgtttccagtctggactctg
ggccgtttctcacgtctctacccctccagctcacttgctcggaacctgggaggcactgag
agataa
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