Pangasianodon hypophthalmus (striped catfish): 113526222
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Entry
113526222 CDS
T05759
Symbol
fer1l6
Name
(RefSeq) fer-1-like protein 6 isoform X1
KO
K22127
fer-1-like protein 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113526222 (fer1l6)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113526222 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Clathrin_lg_ch
Motif
Other DBs
NCBI-GeneID:
113526222
NCBI-ProteinID:
XP_026768886
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MDQDKESSGSQSKNVFGLKVKKRKKKASKALVFANKSAQDYSESKSATEEPPGVEGVEVP
QPGSDPGLSAYLSFREVTNTKRSKPVAKILESESKPQTFQISINITEARQLVGENIDPSV
VIEIGDEKKQTSVKEGTNAPFYNEYFVFDFFAHQEIFFDKIIKLSVMHSKIMKSFCVGTF
KIDVRTVYNQPGHQFTNKWAALMDPTDVSTGVKGHLKCDICVTGKGDVLPHSQKFSDPEE
QIEKNPLLPEGFPSMRPWARYYVKVYRAEGFPRMNSSIMANVTKAFVSDNTALIDPYVVV
SFFGQVGRTSTQKNSADPVWNEQVVFKEMFPPLCQRLKIQVLDEGSMNDVAIGTHYLDLR
RISNDQDGDNGFLPTFGPAWVNIYGSARNSTLVDDSQDMNEGIGEGVSFRGRIYIQLTVE
ILSGGAESKPLLSMKMPFKDAKGGKAATKDPKAAAGGAGGGEEDKSKAMGAMVLPVDPPE
MISDEDKENFLLFGAVFEATMIDRRIGDKHITFEFTIGNFGNFIDGATLPTTKKKVEKGP
DPLSQETAMTTPLLEGQTSKPCKSTTPPEKPLIGDGIRNYLYLPISNKKPCVHVWSCWED
WTYRLHHSNMLDRIAIMFEEGVAKVTELDKLVDPCAEPFMCAVLQEFCKDAREFISFAEK
KAKGTHLTVLDKKRLILCKQELESMIGIAGTIMEPKRKPLTVKEMLREAQILTHRIRFLV
EEPQHTLPDVFVWLLSNNKRIAYARIPARHLLYSDKLVERGRDCGKIKTLFLKPPSKRGA
AGWIVQAKVDVYLWLGNCREMSHMLENLPAGFEPQGSSSEEGTGSLPESLLYKDHHKFQL
RAHMYQARGLIAADNTGLSDPFARVSFLSNTQSTAIIDQTLTPTWNQMLMVNKVSLYGDL
SEIVKEPALVVIEVYDEDALGKPEYLGSTIAVPVVRLNEEPYTPAQLQYSPLFYGSISGG
DILGAFELIQTGKHPLPEIEEPEGQIYPVPSYIRPVLCKYRIEVLFWGLRELKKVQLLPV
DRPQVFIECAGKGVNSSVIQSYKSNPNFTVLVDSFDVELPENEYLHPPLTITVVDWRAFG
RSTLVGSHVINNLGLFKYTPPSLPPPRQLPPEPAIIELAPLPGQEGTEAQSSEEVYITIE
QEEISKPSQTPEPVPQDRKDRVSTKSKRRSTKRKKRTAADESADSVIDWWSKYYASVEKI
QMSKQREANPFPHIYEAVPPLQNLLTDGITTMAKGMKEKKIEFNFKNVMEQTKIATLTIY
DKELEAEFGPFDDWVKTFQLFRGKANEEESSGAERFVGNFKAGFCLYKLPDGDGSLDSGE
YKISQGIPPNSAVNVLIRVYVVAASNLHPADPDGKADPYIVLKLGKNEIKDRDNYIPKQL
NPVFGRSFEIQASFPKESLLRVLIYDYDVIGGDDLIGETQIDLENRFYSRHRATCGLPTE
YAIEGYNAWRDSIKPTDLLIKLCKENKLDSPRFTPGRITIGEKVYTGKTVFADEDQVVES
YEHLALKVLQRWEEMPGMGCKLVPEHIETRTLYLKDKPGMDQGQVQMWVDIFPMDMPHPG
PPVDISPRKPKGYELRIIIWNTEDVILEDTNFITGQQSSDIYIKGWLKGLEDDGQETDVH
YNSLTGEGNFNWRFVFPFHYLPAEKLVVVSKRENIFSLDKTEQKLPAVLVLQVWDFERLS
SDDFLGSVELDLHWFPRGAKKAKECKMDMLNNHSENISIFQQKRAKGWWPFVKADELTGK
VEAEFHLVTAEEAEKNPVGRARKEPEPLEKPNRPDTTFSWFVNPFKCFFHLIWKNYKKYI
IAALLLLILALFLALLFYTLPGAISNRIVSG
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagacaaagagagctctggatcacaaagcaaaaatgtctttggattaaaagtg
aagaagaggaagaagaaagccagcaaagctctagtctttgcgaacaaaagtgctcaggat
tattctgagagtaaaagtgctactgaagaaccaccaggtgtagaaggtgttgaagtccct
cagcctggcagtgaccctggtctctctgcctacttgtccttcagagaagttaccaatacc
aagagatccaagcctgtggccaagattttggaaagtgaaagtaaaccacagacttttcag
atttccatcaacatcacagaggctagacagctggttggtgaaaacattgaccccagtgtg
gtcattgaaatcggagacgaaaagaaacagacatcagtaaaagagggcaccaatgcaccg
ttttacaatgagtatttcgtgtttgacttctttgcacatcaagagatattttttgacaaa
atcattaaactatcagtaatgcattcaaagatcatgaaaagcttttgcgtgggaacattt
aagattgatgttagaaccgtctacaatcagcctggtcatcagtttaccaataaatgggca
gctcttatggatcctacagatgtcagcacaggagtcaaaggtcacttgaagtgtgacatc
tgtgtgacggggaaaggagatgtgttgccccattctcagaagtttagtgaccctgaagag
caaatagaaaagaacccactgctgcctgaaggtttcccatctatgcgcccatgggcccgt
tattatgtgaaagtgtacagagcagaaggttttcccaggatgaattctagcatcatggct
aatgtgaccaaggcgtttgttagcgacaacacagctcttatagatccatatgtggtagta
tctttctttggacaggtgggccggacctccacacagaagaactcggcagaccctgtatgg
aatgagcaggtggtatttaaagagatgtttcctcctttgtgtcagaggctaaagatacag
gtactggatgagggtagcatgaatgatgtagccattgggactcactaccttgatctgcgc
agaatttccaatgaccaggatggcgataatggtttcctccccacatttggtcctgcctgg
gtcaacatctacggttcagcccgtaactctactcttgtggatgatagtcaggacatgaat
gagggaataggggaaggggtatcatttagaggaaggatttacatccagctaactgtggag
atcctgtctggaggggctgagtcaaaacctctgctctctatgaagatgccttttaaagat
gctaagggtgggaaagcagcaactaaagaccctaaagctgcagcaggaggggcaggtgga
ggagaggaggacaaaagcaaggctatgggagccatggtactgcctgtggatccacctgaa
atgatcagtgatgaggacaaggagaacttcctgctgtttggtgctgtgtttgaggctact
atgattgacaggaggattggtgacaaacatatcacttttgaattcactattggaaacttt
ggtaactttattgatggtgccactctaccaaccaccaagaaaaaagtagagaaaggtcct
gatcctttaagccaagaaactgccatgactactcctcttctagaaggtcaaacatcaaag
ccgtgcaaatccaccacacctccagagaagcctcttattggagatggaatcaggaactac
ttatatttacccatttcgaataagaaaccatgtgtccatgtgtggagctgctgggaggac
tggacataccgcctccaccattctaacatgctggacaggattgccatcatgtttgaagaa
ggagtagccaaggtgacagaactggacaagctggtggatccatgcgccgaaccttttatg
tgtgctgttttacaagaattttgtaaggatgccagggagtttatcagttttgctgaaaag
aaggcgaaaggaacccatttgacagtgttagataagaagaggctcatattgtgcaaacag
gaactggagagcatgataggaatagctggaaccatcatggaaccaaagagaaaacctcta
actgtcaaagagatgctgagagaagcacagatactcacacacagaatcagattcctggtg
gaagagccacagcacacactgccagacgtatttgtgtggttgctcagtaataataaacgc
atagcgtatgcccgcatccctgcacgccacctgctttactctgataaacttgtggaaaga
gggagagactgtggcaagatcaaaaccttgttccttaagcccccgtccaagcgtggagca
gctggctggatagtgcaggctaaagtggatgtgtacttgtggctgggcaactgcagagag
atgtcccatatgctggagaatctcccagcaggctttgagccacaggggtcatcatcagag
gagggtacaggctctcttcctgagagtttactctataaagaccatcataagtttcagctg
agggctcatatgtaccaggctcgtgggctcattgcagcagacaacacaggcctgtcagac
cccttcgccagagtatccttcctctccaacactcagtccacagcaataattgaccagact
cttaccccaacatggaaccagatgttgatggtaaataaggtgtctctgtatggagatctc
agtgagatagtaaaagagccagctcttgttgttattgaggtctacgatgaagacgcactg
ggtaagccagagtacctgggctccactatagctgtgccagtggtcaggctcaatgaggag
ccatacacaccagctcagctgcagtacagtccacttttttatggtagcatatccggtggc
gacatacttggagcttttgagcttatccagacaggaaagcatcctctacctgagatagag
gagccagagggccagatctaccctgtgccttcatacatccgacctgtgctctgcaaatac
agaattgaagttctcttctgggggttgagagaactgaaaaaggtgcagctcctgcctgtg
gatcggccccaggtcttcattgagtgtgcaggaaaaggcgttaactcctctgtgatacag
agctacaagagcaacccaaacttcaccgtgcttgtggactcctttgatgtggagctgcct
gagaatgagtacctccaccctcctctcacaatcactgtggtggactggagagcctttggc
aggagcactctggtgggcagccatgtcataaacaacctgggcctgttcaaatacacgcct
ccatctttaccccctcccagacaacttccacctgagccagccatcatagagcttgcacca
cttcctggacaagagggcactgaagcacaatccagtgaggaagtatacataactatagag
caggaggagatcagcaaaccttctcagacacctgagccagtgcctcaggacaggaaggac
agagtctctacaaagagcaagcgaagatctactaaaaggaagaaacgcactgctgctgac
gagtctgctgacagcgtcattgactggtggtctaagtactacgcttcagtagagaaaatc
caaatgtcaaaacaacgagaggccaacccatttccacacatctacgaagctgtacctcct
cttcagaacttgctcacagatggaataaccactatggctaagggaatgaaagagaagaaa
attgagtttaacttcaagaatgtaatggagcagaccaagattgcaactttaacgatatat
gacaaagagctagaggcagagtttggtccttttgatgactgggtcaaaacctttcaactg
tttcgtggtaaggcaaatgaagaagagagctctggtgctgagaggtttgttgggaacttt
aaggctgggttttgtctgtacaagctgcctgatggtgacgggtctttggactctggagag
tataaaataagccagggtattccccccaactccgctgtaaatgtcctgatccgtgtgtat
gttgttgcagcctcaaacctccatccagccgaccctgatggaaaggcagatccttatatt
gtgctgaaactaggaaaaaatgaaatcaaggacagagacaactacatcccaaaacaactc
aacccagtgtttggcagatcgtttgaaattcaagcctctttccccaaggaatccttactg
agggttctcatctatgactatgatgttattggtggtgatgatttgattggagagacacag
atagatttggagaaccgattttatagcagacacagagcaacctgtggcctcccaactgaa
tatgccattgagggctacaatgcctggagagattccattaaaccgactgatttgctgatt
aagctatgcaaagaaaacaaacttgacagccctcgcttcactcctggtagaatcaccatt
ggagaaaaggtttacaccggaaaaacagtctttgctgatgaggatcaggtagttgagtcc
tacgaacatttggcactgaaagtactgcaaaggtgggaagaaatgccaggtatgggctgc
aaactggtgccagagcacatcgagacccgcaccctatacctaaaggacaagcctggcatg
gaccagggccaggtgcagatgtgggtagatatctttcctatggacatgcctcatcctgga
cctcctgtggacatttccccccgcaaacccaaaggatatgaattgaggatcataatctgg
aacacagaagatgtcattttggaagacaccaatttcataactggccaacagtcgagtgac
atctacattaaagggtggctgaagggccttgaagatgatggccaggaaacagatgtccat
tacaactctctgactggtgagggtaacttcaactggcgcttcgtgttccccttccactac
cttccagctgagaaactggtggtggtcagcaaacgtgagaacatcttttctctggacaag
acagagcagaagctgcctgcagtcttagtgctacaggtgtgggactttgagaggttgtct
tctgatgacttccttggctcagtggagttggacctgcattggtttcctcgtggtgccaaa
aaagcaaaagaatgtaagatggatatgctaaataaccacagtgaaaatatatccatcttc
cagcagaaacgtgccaaaggctggtggccttttgtgaaggctgatgagcttacaggaaaa
gtggaagctgaattccacttggtaacagctgaagaagcagagaagaaccctgtaggtcga
gcacgcaaggagccagaaccactagaaaaacccaatcgaccagatacaaccttctcttgg
tttgtgaacccatttaagtgtttcttccatctgatctggaagaactataagaagtacatt
atagctgccctgttgctgctgatcctggcactgtttcttgccttgcttttctacacactg
ccgggggcgatcagcaacaggatcgtcagtggatga
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integrated database retrieval system
