Pangasianodon hypophthalmus (striped catfish): 113526259
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Entry
113526259 CDS
T05759
Symbol
cir1
Name
(RefSeq) corepressor interacting with RBPJ 1
KO
K06066
CBF1 interacting corepressor
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113526259 (cir1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cir_N
Motif
Other DBs
NCBI-GeneID:
113526259
NCBI-ProteinID:
XP_026768946
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MGKSFANFMCKKDFHPASKSNIKKVWMAEQKITFEKKKQEELMQAYVKEQETYNNRLLMG
DERVKNGLNFMYEAPPGASKEETKEEGEAEYKFEWQKVAPREKYAKDDMNIRDQPFGIQV
RNVRCIKCHKWGHVNTDRECPLFGLSGINASSVANDEAGPSMHPSELMAEMRNSGFALKK
CVLGRNATVCDPAQGFVASEEEEDPEVEFLKSLTTKQKQKLLRKLDRLEKKKDKKKKSKK
EKKKKRKQKKKTTESSSSSTSDSSSSSESESERHKAKKEKKVKKKRRRDSSSESSSDSES
EGRPRGKNKEPCNRNRIQSPDSKHSRDKHERTESDEQDRRREKGQRSPHRKESLQNESKE
TEWRNKDRERRGGEREKGEHRISRTRDGERNRSLSGERGRKRREKSWDNERIREKERNAK
QRSVSNDQGRNEKRRSQSRDRQQENKARRKERSDSFERSRGGKGRSRSRERVRSRSRERI
RERNGSKERVMIRSRETVRDGKERNRSPCRGDRKR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcgtttgctaattttatgtgcaagaaagattttcacccagcgtcaaaatcc
aacataaagaaggtatggatggcagagcagaaaataaccttcgagaagaagaagcaggag
gagttgatgcaggcttatgtgaaagagcaggagacctacaacaacagactgctgatgggt
gatgaaagagtgaaaaatggcctgaattttatgtatgaagctcctcctggtgcatccaaa
gaggaaaccaaagaggaaggagaagcggagtataagtttgagtggcagaaggttgctcct
cgtgaaaagtacgctaaagatgacatgaacatcagagatcagccttttgggatccaggtg
cggaatgtacggtgtatcaagtgtcataagtggggtcatgtgaacacagacagggagtgt
cctctctttggactgtctggaatcaacgccagctctgtagcaaatgatgaagcaggcccg
tcgatgcacccctccgagttaatggcagagatgcggaacagtgggtttgcgctgaagaaa
tgtgtccttgggaggaacgccactgtttgtgatccagcacaggggtttgtggccagtgag
gaagaagaggatcctgaagtcgagttccttaaatctttaaccacgaagcagaaacagaag
ctcctcagaaaacttgaccggctagaaaagaaaaaggacaagaagaagaagagtaaaaag
gagaaaaagaagaaacgcaaacagaagaaaaagacgactgagagttcctccagcagcacc
tcggacagtagtagcagctctgagtctgaatctgaaagacacaaagctaaaaaagagaag
aaggtgaaaaagaagagaaggagagactcatccagtgagagcagttctgacagtgagagt
gaaggaagaccgagaggaaaaaacaaggagccttgcaatagaaaccgcattcagagtcct
gattctaagcatagccgagacaaacatgagcgcacagagtcagacgagcaggacagacga
cgagaaaaaggtcagaggtcaccacatagaaaagaaagcctgcagaatgagagcaaagag
acagaatggaggaataaggacagggagagaagagggggcgaaagagagaagggtgaacat
agaatcagcagaaccagggatggtgagagaaataggagtttgagtggagagagaggaagg
aaaaggagggagaagagttgggataatgaaaggataagggagaaggaaaggaatgccaaa
caaagaagtgtgagtaatgatcaaggtagaaatgaaaaaagaaggagtcaaagccgggat
agacaacaagagaacaaggcgaggaggaaagagaggagtgatagttttgaacgaagtaga
ggtggaaaaggaagaagtaggagtagggagagagtgagaagcaggagtagggagaggata
agagagaggaatgggagtaaggaacgagtaatgatcaggagtagggagacagtgagggat
gggaaggaaaggaacagaagtccatgtcggggcgataggaaacgatga
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