Pangasianodon hypophthalmus (striped catfish): 113526290
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Entry
113526290 CDS
T05759
Symbol
ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113526290 (ttc21b)
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
113526290 (ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_C
ARM_TT21_2nd
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_8
TPR_1
TPR_7
TPR_6
ANAPC3
TPR_12
TPR_11
CFAP70_TPR_C
TPR_17
CFAP70_mid_TPR
TPR_CcmH_CycH
RMD1-3
TPR_21
TPR_Slam
TPR_15
TPR_9
TPR_Psidin_N
Wzy_C_2
Gly_acyl_tr_N
Motif
Other DBs
NCBI-GeneID:
113526290
NCBI-ProteinID:
XP_026769013
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MAEVEDEEITQALIVYYCQEKYSNHVLKVSSEAQRKFSSSPIYIFFHAYGLLMQDHVQEA
IQELEQVKDKRDVSLCALMALVYAQKKRPNPDRDIIQELDVKVKENRKTASPKALYHAGM
FLWLLGRNDKAREYVDRMIKISNGSTEGLILKGWIDLTSGKDGYTKKSGKYFDEALKEKI
NIFALMGKVQYNEVRQNYSGALETVNQVIVSYPSFTPALVKKMKLLLNLQDWEQTVDAAQ
RLLQKDRSNLEGLRMLALHSLCREGDIGESVKQLLTLISNLDSQEPNNPELLYRMSLAFT
RGCGRAEKVLQHTHTLVERAFSLASGDAELATELGYQLVLQGRTKEAIKWYKTAMTLDES
SVSALIGIIHCQLSEGHLQDAEQQLEFLTEIQQSIGKSAELMYLRAILAIRKRKSQDEVT
NLLNVTVDTHFSTLQGLPLSVEYYEKLNPDFLLEIAKEYLALCPAKPPAQGQAPAPQLQH
CAAVLDTVVKIVPGLLQAVFLMAKVRFLSGNIEAAQSSLQHCLEQKPSFADAHLLMAQIH
LIQGNFKLSSQSLELCLSHNFEVREHPLYHLIKAQTQRKMGELQEAIQTLQLAMSLPGVK
RVGSSAKTKARRVELSTADCVSVYLELAEALWLNGEQHEAAKVMQDAINEFTGTPEELRV
TIANADLALLRGDTELALSMLRNITQEQPYFVQATEKMADVYLNHRKEKRLYISCYRDLV
EKMPSSHTYLLLGDAYMNIQEPEMAIEVYEQALKRSPKDGAVASKIGKALVKTHNYVKAI
NYYEAALKSGQQSFLRYDLAELLMKLRQYERCEKVLHEALSHDPVNELPLLTEDCRYLVL
LAKIQSKVNKNDEALLSLHRARDVQAKVLKRVQLEQPDAVPMQKQLASEICGEIAKHCSH
QRGYERAVKFYKEALVYCESDSKVMLELAQLYLTLDDVEACQQQCSVILKNDPVNEAATL
MMADLMFRKQDYEQAVFHFQQLLERKPDNYPTLSRLIDLLRRAGKLEEIPRFLDMAEKHS
PRAKFEPGYNYCRGLYLWYTGEPNEGLRHFNKARKDNDWGQNAVYNMIEICLNPDNETMG
GEVFENLDGDMGNSTEKQESEQLAVRTAEKLLKELKPQTPQGHTQLRVLEHYCYLATKQK
ANVEKALGVFIDIANSEKDHVPALLAMATAYMILKQTPRARNQLKRIAKMNWNIIDADEF
EKSWLLLADIYIQSGKYDMAGELLKRCLRHNKSCCKAYEYMGYIMEKEQSFRDAAMNYEL
AWKYGNQTNPTIGYKLAFNYLKAKRHVDAIDVCHKVLDAHPNYPRIRKDILDKARAALRS
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttgaggacgaagaaataacacaggccctgatcgtttattactgccaggag
aagtattccaatcatgtgttgaaagtttcaagtgaagcccagcgaaagttcagcagtagc
ccaatctacatattcttccatgcctatggccttctcatgcaagatcacgtacaagaggcc
attcaggagctggaacaggtgaaagataagagagatgtatcattatgtgcattgatggct
ctggtctatgcccagaaaaaaagacctaacccagacagagacatcatccaagagcttgat
gtgaaggttaaagagaatcgtaagactgccagcccgaaagctctgtaccatgctgggatg
tttctctggctcctgggccggaatgacaaggccagagagtatgtggacaggatgatcaaa
atctccaatggctccacagaggggttgatactgaaaggctggatagacctgacttctggt
aaagatggctacaccaagaaatctggaaaatactttgatgaagctctgaaagagaaaatc
aatatttttgctctgatgggaaaggtgcagtataatgaggtccgtcagaattactctggt
gccttagagacggttaaccaggtcattgtcagttacccatcattcacacctgctctggtg
aagaagatgaagcttctgttgaacctgcaggactgggaacagactgtggatgctgctcaa
agacttcttcagaaagaccgaagcaacctggagggactgagaatgctagcactgcactcg
ctctgccgagaaggagacattggggagtcagtgaagcagttgttgacccttatcagcaac
ctggactcacaagagcctaacaacccagaacttctttacagaatgtctttagctttcact
cgagggtgtggaagagcagaaaaggttctgcagcacacacatacactagtggagcgagca
ttctctctggcgtcgggtgatgcagagctggccactgaactgggctaccagctggtcctt
cagggcagaaccaaggaggccataaagtggtacaaaactgccatgacattggatgagagc
agtgtctctgctctgataggtattattcactgccagttgagtgagggtcacctgcaggat
gctgagcagcagctcgagtttcttactgaaattcagcaatccatcggcaaatcagcggag
ctgatgtatttgcgggcaatcctggccattcggaagcggaagtctcaggatgaggtgacc
aacctgctgaatgtcactgtggacacacacttctccactctgcagggcctgccactcagt
gtagaatactatgagaaactcaaccctgatttcctgctggagatcgcaaaggaatacctg
gcactctgtcctgccaagcctccagcccagggccaggctcctgctcctcagctacagcat
tgtgcagctgtgctggacacggttgtcaagattgtccctggactcctccaggctgtgttc
ctgatggcaaaagtcaggtttctgtcagggaacatagaggcagctcagagcagtctgcag
cattgtttggaacagaaaccctcctttgcagatgcccacctcctcatggcacaaatccat
ctcatccagggcaacttcaaactctcttctcagtctctagagctctgcctcagccacaac
tttgaggtaagggagcaccctctgtatcatctgattaaagctcaaacacagagaaagatg
ggtgagctgcaggaggccattcagacacttcagttggccatgagtctgccaggagtgaaa
agagtaggttcctctgccaaaaccaaagccaggagagtagagctcagcacagcagactgc
gtttctgtgtatctggagctggcagaagcactctggctcaatggagaacagcatgaggca
gctaaagtgatgcaggatgctataaatgagtttactggtactcctgaggagctgcgcgtc
accatcgctaacgccgaccttgcgctgctaaggggggacacggaacttgcactgagcatg
cttagaaacatcacacaggagcagccctactttgtgcaggccacggagaaaatggccgat
gtctacctgaaccacaggaaggagaaacgactgtatataagctgctatagggatttggtg
gaaaagatgcccagctcacatacatacttactattaggggatgcctatatgaacatccaa
gagcctgagatggccattgaggtttatgagcaggctttgaagagaagccctaaagatggt
gctgtggctagcaagattggaaaagctcttgtcaagacccataactatgttaaggccata
aactattatgaggctgctcttaagagtggtcagcagagcttcttgcgctatgatctggct
gaactgctcatgaagctaagacagtatgaacgctgtgagaaagttctgcatgaggctctc
tcacatgaccctgtgaatgaactgcctttgctaacagaagactgccgttaccttgtactg
ctggccaagattcagagcaaagtcaataaaaatgatgaggcgttgctttctttacatcgt
gcgagagatgtgcaggcgaaggtgctgaagcgtgttcagttggagcagcctgatgcagtg
cccatgcagaagcagcttgcctccgagatctgtggtgaaattgccaagcactgcagccac
caacgtggctatgagagagccgtcaagttctacaaagaagcgcttgtgtactgtgagagt
gacagcaaggtaatgttggagctagctcagctgtatctaactctagatgatgtagaggcc
tgccagcagcagtgcagtgtcatcctgaagaacgacccagtcaatgaggcagcaacactg
atgatggctgatctgatgttcaggaaacaggactacgaacaggcagttttccactttcag
cagctactggagaggaaaccagacaactatccaacactgtcccggctgattgacctgctg
cgcagagctggcaaactggaagagattcccaggtttctggatatggctgaaaaacactca
ccaagggccaaatttgagccagggtacaactactgcagaggcctttacttgtggtacact
ggtgaacccaatgagggtttgcgtcacttcaataaggctcgtaaggacaatgactggggt
cagaatgcagtgtacaacatgattgagatttgcttaaacccggataatgagacaatggga
ggtgaggtgttcgagaacctggatggagacatggggaactccacggagaagcaggagtca
gagcagctggcagtgcgaacagcagagaaactgctgaaggagctgaagcctcagacccct
caaggccacacgcagctacgcgtccttgagcattactgttacctggctaccaagcagaag
gccaacgtggagaaagctcttggagtgttcattgacattgcaaacagtgagaaagatcat
gtccctgcactgttggcgatggccacagcctacatgatcctcaaacagactcctcgagcc
aggaaccagctgaaacgcattgccaagatgaattggaacattattgatgccgatgagttt
gagaagagctggctgctgctggcagacatctacatccagtccggcaaatatgacatggca
ggagagctgttaaaacgctgcctgcgccacaataagtcatgctgcaaagcttatgaatac
atgggttacatcatggagaaggagcaatctttcagggatgcagccatgaactatgaactg
gcctggaaatatggcaatcagaccaatccaaccatcgggtacaaacttgctttcaactat
ttgaaggcaaagagacatgtcgatgccatagatgtttgtcacaaagtcttggatgcacac
ccaaactatccaaggataagaaaggacattttggacaaagcaagagctgctttgagatct
tga
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integrated database retrieval system
