Pangasianodon hypophthalmus (striped catfish): 113526392
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Entry
113526392 CDS
T05759
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145
Phagosome
phyp04814
Motor proteins
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113526392
09142 Cell motility
04814 Motor proteins
113526392
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113526392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113526392
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113526392
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
113526392
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
113526392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_HPS5
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
113526392
NCBI-ProteinID:
XP_026769177
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MSNTRNIIKAKLERTKQLVAEMHEEKRRKQEERKKKECEVQQMAASESEDLDLDRKRREI
SQELPLVQPLQLLTWDACYFHYLVPTPMSPSSQSVSASSENGSQESVEGGTLARTLQWDM
DPSALQLLADSEHRYRMQRLEASEIVQIDYMPRELVTYCKETQTPVAPNLSEEEEEDEEL
PVVNPKPESEEHVVEDNQEAMQEHSKELTEEEKQQIVHSEDFLIFFDRSIRVVERTLAED
LDIFFDYSGRDMEDREGDTQAGLNLSFSQQFYDEQWSKHRVVTCLDWSPQYSELLMASYN
ANEHAPQDPDGVVLVWNMKFKKTTPEYIFHCQSSVMSVGFAMFHPNLVVGGTYSGQIVLW
DNRSHRRTPVQRTPLSAAAHTHPVSSINVVGTQNAHNLITVSTDGKMCSWSLDMLSQPQD
SMELNYNKSKVVAVTGMAFPAGDVNNFVVGSEEGTVYTASRHGSKAGINEMFEGHLGPVT
GISCHNAVGPIDFSNLFTTSSFDWTAKLWSTKNNKPLYSFEDNVDYVYDVMWSPMHPAVF
ATVDGVGRLDIWNLNKDTEVPTASVTVEGSCALNRVRWASGGREVAAGDSEGRVWVYDVG
EQLAVPHSEDWSRLAQVLMEIPANIDGEGAIEVTN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacacacgcaacataataaaagccaaactggagcgcacaaaacagcttgttgct
gagatgcatgaagaaaaaagaagaaaacaagaagaaagaaaaaagaaagagtgtgaggta
cagcaaatggcagcgagtgaatcagaagacttagacttggatagaaagagaagagagatc
tctcaagaactgcctttagtgcagccactccagcttttaacatgggatgcctgttatttt
cattatttagtcccaacccctatgtctccctcttcgcaatcagtgagcgcttccagtgag
aacgggagccaggagtcagtggagggaggaaccttggctaggactctgcagtgggacatg
gacccctcagctcttcagctcctagcagactcagagcacaggtacagaatgcagagactt
gaagcatcagagattgtacagattgattacatgcccagagaactagtgacgtactgtaaa
gagacccagactcctgtagcaccaaacctgtctgaagaagaggaggaggatgaagaactc
cctgtggtcaatcccaaacctgaatctgaagaacatgtggtggaggacaatcaggaggct
atgcaagaacattctaaggagctcacagaggaggagaagcagcagattgttcactcagag
gatttcctgatcttttttgaccgtagcattcgggtggtggagcgaacactagctgaggac
ttggacattttctttgactatagtggacgtgacatggaagacagagagggagacacgcaa
gctggattaaatctgtccttcagccaacaattctatgatgagcaatggtccaaacatcga
gtcgtcacctgtctggattggtcaccacagtattcagaattgctgatggcttcatacaat
gccaatgagcatgcaccacaggatccagatggagttgtgctggtgtggaacatgaagttt
aagaagacaaccccagaatacatattccactgtcagtcctctgtgatgtcagtgggtttc
gcaatgtttcatccaaacctcgtagttgggggcacttactctggccagatagtattgtgg
gacaatcggagccacaggagaactccagtacaaaggacaccattatctgctgctgctcat
actcatcctgtgtccagcataaacgtggtgggaacccaaaacgcccacaacctgatcact
gtatccacagatggcaagatgtgctcctggagtttagatatgctctctcagccacaggac
agtatggaactaaactataacaagtctaaggtagtagctgtgactggaatggcttttcct
gctggtgacgtgaataactttgtggtgggaagtgaagaagggacagtgtacacggcttca
cggcacggcagtaaggctggtattaatgagatgtttgagggccacctggggccagtgact
ggcatcagctgccataatgctgtgggtcccattgatttctccaacctcttcaccacctca
tcctttgactggactgccaaactgtggtcaactaaaaataacaaaccgctctactcattt
gaggacaatgttgactacgtctatgatgttatgtggtctcctatgcacccagctgtcttt
gctacagtggatggagtgggtcgcttggacatctggaatcttaataaggacacagaagtt
cctacagcaagtgttacagtggagggctcttgtgctctgaaccgggtcagatgggcatca
gggggccgagaagtagcagcaggtgattctgagggtcgagtctgggtctatgatgttgga
gagcaattggcagtgccacattcagaggactggagccgacttgcacaagttctcatggag
atcccagcaaacattgatggagaaggtgccatagaagtaaccaactga
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integrated database retrieval system
