Pangasianodon hypophthalmus (striped catfish): 113526435
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Entry
113526435 CDS
T05759
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
phyp04517
IgSF CAM signaling
phyp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113526435
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113526435
09144 Cellular community - eukaryotes
04530 Tight junction
113526435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113526435
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
113526435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PB1
PDZ_6
Motif
Other DBs
NCBI-GeneID:
113526435
NCBI-ProteinID:
XP_026769261
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MIRSLGKSSAWRCHSVIEVKSKFGAEFRRFSLDRYEPGVFKDFWQFILNLHHLFPTEIYI
SYADVHGDLLPINNDNNFCKAVSTAQPLLRIFIQLQEEMDQVNVSTDCVTRRKKSTIAAC
ADVSRRGHVQIGVPQNFRPVSSIIDVDILPECHRRVRLYHQGSNRPLGFYIRDGITFSVT
PRGLEKVPGIFISRMVPGGLAESCGLLAINDQILEVNGIEVIDKTLDQVTDMMIANSRNL
VITVKPANQSKNIRNPIISPNPELQLDSEGSISYPGLPMIMGAYVSTRNGSVSDDDSDMV
VEKTVKLSPQCSSATVASPSSQTSIHNRHRNGHPYSQELCRSQPCLNYIAHPGSSISLQR
EMSSQQHYKSNPAFRQSTSSTFDILSTLSPDLRQRLMIPQGAMEEDGTVITL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaagtttgggcaaatcgtcggcttggcgctgccactcagttattgaagtgaaa
agcaaatttggtgcggagtttaggagattttctctggatcgctatgagcctggcgtgttt
aaggacttttggcagtttatcctgaacctacaccacctgtttcccacagaaatctacatc
agctatgcagatgtacatggagacttactgcccataaataatgataataatttctgtaaa
gcagtgtctactgcacagccactactgcgcatcttcatccagctgcaagaggaaatggac
caggttaacgttagtaccgactgtgtgaccaggagaaagaaatccaccatagcagcatgt
gctgatgtcagtcgcagaggacatgttcagattggagtgccccagaacttccgtccagtc
tcctccataattgatgttgacatcttgcctgaatgccacagaagggttcgtctgtaccac
cagggctcaaacaggcctctgggtttctacatccgtgatggaatcacattcagtgtaact
cctcgtggacttgagaaagttccaggaatcttcatctcacgaatggttcctggtggattg
gctgagagctgtggtcttttggccattaatgaccagatcctggaggtcaatggtatcgag
gtgatagacaagaccctggatcaggttacagacatgatgattgctaacagccgcaaccta
gtcatcactgtgaaaccagcaaaccagagcaaaaacataagaaatcccataatctcccct
aacccagaactccagcttgatagcgagggctctataagctacccaggacttcctatgatt
atgggagcctatgtttcgacacgtaacggctctgtgagtgatgatgattcagacatggtt
gtggagaaaactgtgaaactctcaccccagtgttccagtgctacagtagcctctccatct
tctcaaactagcattcacaatcgccacagaaatggccatccctactctcaagaactgtgc
cgctcacagccctgcctcaattacatagctcatcctgggtccagcatttcattgcagaga
gaaatgagctcacagcagcattacaagagcaacccagcatttagacagagcacatctagc
acctttgacatcttgagcacattgagcccagatctgcggcagcgcctcatgatacctcaa
ggggccatggaggaggatggaactgttattactctatga
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