KEGG   Pangasianodon hypophthalmus (striped catfish): 113526531
Entry
113526531         CDS       T05759                                 
Symbol
snrnp48
Name
(RefSeq) U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1
  KO
K13156  U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113526531 (snrnp48)
Spliceosome [BR:phyp03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    113526531 (snrnp48)
SSDB
Motif
Pfam: zf-U11-48K
Other DBs
NCBI-GeneID: 113526531
NCBI-ProteinID: XP_026769455
LinkDB
Position
Unknown
AA seq 336 aa
MSGFDSSEALQERLETLHQLTEFTQNCRTQLTELFEVLGWSWENYSSQQDKMEVCPYDPN
HTVPCSSMENHRTTCLLSQLGYSREEQAEMYETSFCYEKANIPSIKLDKHEQHQVILQAR
ASAPPIQSTGSYCQKDYSTEPADVPQNHKRAICDLTTADRLALYDHVIQEAIQQSAKASN
NEDLYVDLVSKLNKDEEKSGPKSHLEVLAEMRDYRRRRQSYRAKNVHITKKSYTEIIREV
IDVHSGELAKLWQEEREEESKTSQHSHRRLPDESRSASVESRESHVSFREENSSHHKRHQ
KHSREHSQERGSKSRRRDSHSPEERHHKKKKKKNKS
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgagtggctttgattcctctgaggcgctgcaggagcggttagagactctgcatcaactg
actgagtttactcaaaactgtcggacacaactgacagagctgttcgaggtgctgggatgg
agctgggagaattattcctcacagcaggacaagatggaggtgtgcccctatgacccgaac
cacacagttccgtgtagcagcatggagaaccacagaacaacctgtctgctcagccagctg
ggatactccagagaagaacaggcagagatgtacgagacatcattctgctatgagaaggcc
aacattcccagcataaaactggataaacatgaacaacatcaggtaattctgcaggcccgg
gcgagtgcccctcctattcagtcgacaggaagttactgccaaaaggattactccactgag
cctgcagatgtgcctcagaaccacaaacgagcaatatgtgacctcacaacggctgaccga
ttggctctgtatgatcatgtgattcaggaggccatacagcagagtgcaaaggcatccaac
aatgaggatctctatgtggatcttgtgtccaagcttaacaaagatgaggagaaaagtggc
ccaaagtctcacctcgaggtcctggctgagatgagggactacaggagacgccgtcagtca
tacagagccaaaaatgttcacatcaccaagaagtcttacaccgagatcattcgtgaagtg
atagatgtccactcgggggagctggccaagctgtggcaggaggagagagaggaggagagc
aaaacttcacaacactcccacaggagactgccagatgaaagccgctctgcctctgttgag
tcacgcgaatctcacgtgagtttcagagaagagaacagctctcaccacaaacgtcaccaa
aaacacagccgcgagcacagccaggaaagaggcagcaaaagcagaaggagggattcccac
tcccctgaagagagacatcacaagaaaaagaagaagaaaaacaagtcatga

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