Pangasianodon hypophthalmus (striped catfish): 113526546
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Entry
113526546 CDS
T05759
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113526546
04020 Calcium signaling pathway
113526546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113526546
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113526546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Dicer_platform
Motif
Other DBs
NCBI-GeneID:
113526546
NCBI-ProteinID:
XP_026769489
LinkDB
All DBs
Position
Unknown
AA seq
2193 aa
AA seq
DB search
MVRSGQHAPNGTGSGSGAAGSGAAGLGAAGSGARADGPGNEAPKSIKARRAKPPPPGRRN
CLTANRSLFIFAENNPVRKYARRIIEWPPFEYMILATIIANCVVLALEQHLPGEDKTPMA
KRLEKTEPYFIGIFCFEAGIKLLALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHMN
IPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIIKAMVPLLQIGLLLFFAILMFAIIGLE
FYSGKLHHTCLPRPDILDNETVDSSEVEFACGVRRCPEKYDCNGTWIGPNDGITQFDNIL
FAVLTVFQCITMEGWTAVLYNTNDALGPTWNWMYFIPLIIIGSFFVLNLVLGVLSGEFAK
ERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLAEENKNSGRSALEVLKRATSK
KNARRRGEDKYSEIATVGGPRPPVNIRTVRRGPAAYLRRKERMLRFSIRRMVKTDSFYWI
VLSLVGLNTICVAIVHHNQPEWLTVLQYYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFN
CFDCGVIIGSIFEVVWGFFRPGTSFGISVLRALRLLRIFKITRYWASLRNLVVSLMSSMK
SIISLLFLLFLFIVVFALLGMQLFGGRFIFKDYTPANFDTFPAAIMTVFQILTGEDWNEV
MYNGIRSQGGVQYGMWSSIYFIVLTLIGNYTLLNVFLAIAVDNLANAQELTKDEEEEEEF
FNQRYKGREFGLSDRRRRRPYLYRKRAIHRGRPNPAEAEEETVGAKTSEEQPSNAFANRR
DRRNKIKMSVWEQRANQLRRRRQMASREVLFDSPTEDPMGTPMSGHHQTHTTVPSAEASP
AHLPESPMSVVMPLPEPPMSISIPLPEPPESEPVSLMGSGMEDRPSGTVHRSNTDRRHRV
ARKFRAAAAAGVVQGGRHRRHRHRESRTEIKNTDEEQFQEGGDDGEASQSRQSLLMDETD
PIMSHQPDEEQQRDSVCEVSVRSDVAEGESGLQCTCTALSEDREAESCLQHREENTPELN
YLSGEAIDNENNACYLNQGESMTEASIMREMSAQPLLELTPMTVSFKDVEASHSEKTGRD
DDDDDDDDDDDDMDEDAQTKVAKPEAPDSMFIFKSKNPIRRICHYVVTLRYFEMTILLVI
VASSIALAAEDPVCTNSERNRVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWN
ILDFIVVVGALIAFALTNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVV
TSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSMGTQRECQGYYIDYGRDRKEV
KKREWKRHEFHYDNVMWALLTLFTVSTGEGWPQVLQHSVDVTEEDHGPSRGNRMEMSIFY
VVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECNLEKNERACIDFAISAKPFTRYMPQN
RQTLQYRLWHFVVSPSFEYTVLVMIALNTVVLMMKYHSAPAAYDMVLKHLNTAFTVLFSL
ECILKIMAFGFMNYFRDTWNIFDFITVLGSITEIIVDLQSVNTFNMSFLKLFRAARLIKL
LRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDESHINQHNNF
KTFFGALMLLFRSATGESWQEIMLSCLAGQECEPDPSIAPPFISPDHEGGCGTDFAYFYF
VSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYTA
MYEMLTHMSPPLGLGKKCPAKVAYKRLVLMNMPVDEDMTVHFTSTLMSLIRTALDIKIAR
GGEDRVQLDTELQKEISVIWPHLSQKTLDLLVPINKDTDMTVGKIYASMMIMDYFKQSKA
KKLRRQAEEQSSSPALPLISHSAGSALTSGGFVALSPISPQELLMQPASHQGEDSEDYQV
SMADEQEIDGLWEEEQPPERLYRPRHKSYKAAVSHSEHQAERERGRSKEQRHLLSPNTSR
FNSNERSSKSCSRSPSEERQHGHTRQGNSSDSPVPSTSESSTPSARRRLSQTPTHSHPHV
SYSPLVCHTQPSSQAEDEEEEERGGAPILGCCSNALWDENAEEEEIQVGEGEDETGHIEG
DEYLGSGARRFPSEPYLALQEEEHSPDSSAMETLTFEAAVATSLGRANTITASMRTRARL
GWHVPNGHFRKRLAQSVSISAGEPLSDTEDDKY
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atggtccgctccggacagcacgcgccgaacgggacgggctcgggctcgggcgcagcaggc
tcgggtgcagcaggcttgggtgcagcaggctcgggtgcgcgcgcagacggtcccggtaat
gaggcaccaaagagcatcaaagcgcggcgcgcgaaacctccacctccgggccgccggaac
tgtctcacggcaaacaggtcgctgttcatcttcgcagagaataacccggtgaggaagtac
gcgcggaggatcatagaatggcctccatttgagtacatgatcctggctaccatcatcgcc
aactgtgtcgttctggctctagagcagcatcttcccggtgaggacaagacgcccatggcc
aaaagactggagaagacagagccctattttattgggatcttctgtttcgaagccggcatc
aagctgctagctcttgggtttgttttccataagggctcatacctgagaaatggctggaac
gtcatggattttattgtcgtactaagcgggatcttggccactgctggagctcacatgaac
atcccagtggacctgaggacactgagagcagtgcgagtcctgagacctctcaaactcgtc
tcaggaattcccagtttgcagatcgttctgaagtccatcatcaaggcgatggtgcctctg
ctgcagatcggcctcctcctgtttttcgctatcctgatgttcgctatcataggcctggag
ttctacagtggcaagctgcaccacacctgccttcctcgacccgacatcctcgataacgag
acagtggactcctccgaagtggagtttgcctgcggtgtgcgcaggtgtccggagaaatac
gactgtaatggaacgtggattgggccgaacgatggcatcactcagttcgacaacatcctc
tttgcagtgctcacagtgttccagtgtatcaccatggagggctggactgctgttctctac
aatactaatgatgcactgggtcccacgtggaactggatgtacttcattcccctcatcatt
attggctccttcttcgtgctaaacctggtgcttggtgtcctttcaggcgaatttgctaaa
gaaagagagcgtgtggagaaccggcgagccttcatgaagcttagacgacagcagcaggta
gaaagggagcttaatggctaccgtgcatggattgaccgagcagaggaagtgatgctcgca
gaggagaataaaaactctggaaggtctgcattagaggtgttgaagcgagccacgagcaag
aaaaacgcaaggcgtcgtggagaggacaaatattcagaaatcgcaacagttggtggtccc
aggcctccggtgaacatccgcactgtgagaaggggtcctgctgcctacctgcgccgtaaa
gagcgcatgctgcgcttctccatccgccgtatggtcaagacagacagcttctactggata
gtgctcagcctcgtgggcctgaacaccatctgcgtggccatcgtccaccacaaccagccc
gagtggctcaccgtgctacagtactatgcagagttcgtgtttctgggactgttcctggct
gagatgtttctgaagatgtacggtctaggcttccgcctctacttccactcctctttcaac
tgctttgactgcggggtgatcatcggcagtatatttgaggtggtctggggattctttaga
cctggaacgtcctttgggatcagcgtgcttagagctttgagactgttacgaatctttaaa
ataaccaggtactgggcctctttaagaaacctggtcgtgtctctgatgagctccatgaag
tccatcatcagcctcctcttcctgctcttcctgttcattgtggttttcgctctgctcggg
atgcagctgtttggtggcaggttcatctttaaagattacactcctgccaactttgataca
tttccagctgctatcatgactgtctttcagattctgacgggtgaagactggaacgaggtg
atgtataacgggatccgctctcagggaggcgtacagtacggcatgtggtcctccatctac
ttcattgtgctcacgctgattggtaattacacactgctgaatgtcttcttggccatcgct
gtggataatctcgccaatgcacaggagcttacgaaggatgaagaggaggaagaggagttt
ttcaatcagcggtacaagggccgggagtttggcctttctgacagacggaggcgcaggccg
tatctctacagaaaacgagccatccatagaggcaggccgaacccagccgaggcagaggaa
gagacggtgggggcgaaaaccagtgaggagcagccttctaatgcctttgccaaccgacgt
gacagacgcaacaagatcaagatgtctgtgtgggagcaacgtgccaaccagctgcgcaga
cggcgtcagatggcgagtcgcgaggttctgtttgacagccccactgaggaccctatgggc
acaccgatgagtggccaccaccagacgcacaccactgtcccctctgctgaagccagtcca
gcacacctgcccgagtcaccaatgtcagtcgtgatgcctttacctgaaccacccatgtct
atctcgatcccactccctgaaccgcctgaatctgagcccgtgtctctaatgggctctggg
atggaggacagaccctcaggcactgtccatcgctccaatacggacaggaggcaccgggtg
gcacgaaagttccgggctgctgcggcagcaggcgtcgtgcagggtggccgacaccggaga
cacaggcatcgtgagtccaggacagagattaaaaacacagatgaggaacagtttcaggaa
ggaggagatgacggagaggcttcccagtccagacagagcttgctgatggatgagactgac
ccgattatgtcccatcaacctgacgaggaacagcaaagggacagtgtgtgtgaggtttca
gtgagatctgatgtggctgagggcgagtctggtcttcagtgcacttgcacagctctgagc
gaagatagagaggccgagtcctgcctgcagcaccgggaagaaaatacgccagagcttaat
tacctctcaggggaagccatcgataacgagaacaatgcctgctatttaaaccagggggag
tcgatgacggaagcgagcattatgagagagatgtctgcccagcctcttttagagttaacg
ccaatgactgtcagctttaaggatgtggaagcttctcactcagaaaagaccggtagggac
gacgacgatgatgatgatgatgatgatgatgatgacatggatgaagatgcccaaacaaaa
gtcgccaaacctgaggcacccgatagcatgttcattttcaagagcaaaaacccgatccgc
agaatttgccactatgtagtgacactacgctacttcgagatgaccattcttcttgtgatc
gtggctagcagcattgctctggccgcagaggaccccgtgtgcaccaactctgagcgcaac
cgggttcttcgttacttcgattacgttttcacgggtgtgtttacatttgaaatgatcata
aagatgatcgaccagggcctcattctgcacgacggctcatatttccgagacttgtggaac
atcctggacttcatcgtggtggttggagctctcatcgcctttgctcttacgaatgttatg
ggaaacaacaaaggcagagacatcaagactattaagtctctgcgagtgctgagagttctc
cggcctctcaagaccatcaaaaggctcccaaagctgaaggccgtgttcgattgtgtggtg
acgtccctgaagaacgtcttcaacatcctcatcgtctacaagctcttcatgttcatcttt
gccgtcatcgcagttcagctgtttaaaggaaagttcttctactgtacagacggctcaatg
ggcacacagagagaatgccaaggctactacatcgattacgggagagacaggaaggaggtg
aagaagcgggagtggaagagacatgagttccactatgataacgtgatgtgggcgctgctc
acgctcttcaccgtgtccacaggagaaggctggccgcaggttctccagcactcagtagac
gtgaccgaggaagatcacggcccgagccgaggcaaccgcatggagatgtccatcttctac
gtcgtgtactttgtagtcttccccttcttctttgtcaacatcttcgtcgccctcatcatc
atcacattccaggagcaaggggacaaaatgatggaggagtgtaacctggagaaaaatgag
agagcctgcatagactttgctatcagtgcaaagccttttacacgttacatgccccaaaac
cgacagactcttcagtaccgactgtggcactttgtcgtctcgccgtcgtttgagtacaca
gtcctggtcatgatcgcgctcaacactgtggtcctcatgatgaagtatcactcggctccg
gctgcctatgacatggtcctgaagcacctgaacacggccttcactgtgctcttctccctg
gagtgcatcctcaaaatcatggcctttggcttcatgaattatttccgagacacttggaac
atctttgacttcatcactgtcctcggcagcatcactgagatcattgtagacttgcagtct
gtcaacacttttaatatgagttttctgaagctgtttcgtgcagccaggctcattaagctc
ctgaggcagggctacaccatccgaatcctcctctggaccttcgtccaatcctttaaagcg
ctgccgtacgtgtgtctgctcattgctatgctcttcttcatctacgccatcattggcatg
caggtgtttggaaacattaagctgaatgatgagagccatataaaccagcacaacaacttc
aagacgtttttcggcgctttaatgctgctgttcaggagtgcaacaggagagtcatggcag
gagatcatgctgtcgtgtttagctggtcaggagtgtgagcccgacccttccatcgctcca
cccttcatctctccagatcacgaaggcggctgtggcactgacttcgcctatttctacttt
gtctccttcatcttcttcagttctttcctgatgctaaatctttttgtagctgtgatcatg
gataattttgagtatctgacacgggattcctccatcttgggaccacaccatctggacgag
tttgttcggatctggggggagtacgaccgggcagcatgtggtcgtattcattacactgcc
atgtacgagatgctgacccacatgtcgcctcctctcggcctggggaagaagtgtcccgct
aaagtagcctacaagaggctggtactgatgaacatgcctgtggatgaggacatgaccgtc
cactttacttccacactgatgtccctgatccgcaccgctctggatatcaaaatcgcccga
ggaggagaagaccgggtgcagctggacactgaactgcagaaggagatcagtgtgatttgg
cctcatctctcccagaagaccttggacctgctggtgccgatcaataaagacacagacatg
acggtgggtaaaatctacgcctccatgatgatcatggattactttaaacagagcaaagca
aagaagttgaggcggcaggctgaggagcagtcgagcagtcctgcccttcctctcatatct
cacagcgcaggctcggctctgaccagtggtggtttcgtggccctgagtcccatctcaccc
caagagctcttaatgcagccggcgtcacatcaaggggaagacagtgaggactatcaagtg
tccatggcggatgagcaggagatagatggattgtgggaagaggaacagccacctgagcgt
ctgtaccgaccaagacacaagagttacaaagctgcggtgtcccattcagagcatcaggca
gaacgagagcgagggcgatctaaggaacagcgccacctgctgtccccaaacacgtcccgc
ttcaactcaaacgagaggagttcgaagtcctgctctcgttctcccagtgaggaaagacaa
catggacacactcggcagggaaacagctcagacagccccgttccctccacctcagagtcg
agcacaccgagcgccaggcgtcgcctctcgcagacaccaactcactcgcacccacacgtc
tcctactcaccgttagtgtgccacactcagccttcctcccaggcggaagatgaggaggag
gaggagcgaggaggcgctcccattctgggctgctgcagcaatgccttatgggacgaaaac
gcagaagaggaggaaatacaagtgggcgagggagaggacgagacagggcacattgaaggg
gacgagtatctgggctcgggcgcccgtcggttcccttctgaaccctacctcgccctgcag
gaggaggagcacagccccgattcctcagccatggagactctgacgtttgaggctgctgtg
gccaccagcctgggccgcgccaacaccatcacggcctccatgcgcacgcgcgcacgcctc
ggctggcacgtccccaacgggcacttccgtaaacgcctggcacagagcgtctccatctcc
gcgggcgagcctctcagtgacacggaggatgacaaatactaa
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integrated database retrieval system
