Pangasianodon hypophthalmus (striped catfish): 113526570
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Entry
113526570 CDS
T05759
Symbol
nectin1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03266
Virion - Herpesvirus
phyp04514
Cell adhesion molecule (CAM) interaction
phyp04517
IgSF CAM signaling
phyp04520
Adherens junction
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
113526570 (nectin1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113526570 (nectin1)
04517 IgSF CAM signaling
113526570 (nectin1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113526570 (nectin1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113526570 (nectin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113526570 (nectin1)
04090 CD molecules [BR:
phyp04090
]
113526570 (nectin1)
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
Nectin family
113526570 (nectin1)
CD molecules [BR:
phyp04090
]
Proteins
113526570 (nectin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
ig
I-set
Ig_PVRIG
DUF4786
Motif
Other DBs
NCBI-GeneID:
113526570
NCBI-ProteinID:
XP_026769546
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MAMQASSWILLLVLMRTPVGNGQSVQMDPEISGFVGSTVELSCRFINSKPPVKISQVTWQ
KSFNGTKQNVAIANPALGVSVLPAFKDRVTFKHLSMPHANPSLEDTTIVFSNLRLSDEAA
YICEYTTFPAGNRENMVNLTVYARPTTHMTLTTPIIIARAQKHKMTVATCLSANGKPSSV
IKWDTKLKGQATFQETRNPNGTVTIRSNYVIVPSRESHRQKLTCIVTYNTEHFSDSVILN
VQYEPEVKIEGFDGNWYLNRQNVKLTCDADANPAVTGYHWKLLNGSLPKNVEIRNNTLLF
RGPVTYDFSGTYICDATNSIGTRSGLVEVNVTEFPNHILRGGGDNDQKQPSTNAAIWGGV
GGLVVLIIGVALLIYFLRRRQRTFKGDYSTKKHVFGNGYSKAGSVPAHPSVPKNLQYPDD
SDDEKKASQIGGPGAFEGTERDFDGNSEDLKRPYFTVDEGESHDYDERTLAFQYEPESEI
ADDMVSQTDGSVISKKEWYV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaggccagttcatggatcctcttactggttctcatgagaacaccagtgggg
aatgggcagtctgtgcagatggacccagagatatctggctttgtgggttcaacagtggag
ctcagctgccgcttcatcaacagcaagcccccggtgaagatctcgcaggtcacctggcag
aagtccttcaatggcaccaagcagaatgtggccatcgccaacccagcgttaggtgtctcc
gtgctccctgcttttaaagaccgtgttaccttcaagcacctgtccatgccacatgcaaat
ccctcacttgaggacaccacgattgttttcagcaatctgcgcctttcagatgaggctgcc
tacatctgcgagtacaccaccttcccagcaggcaacagggaaaacatggtcaacctcact
gtctacgcacgtcccacgacacatatgacccttacaactcccatcatcatcgcacgggcc
cagaagcacaagatgacagttgccacatgtctgtcagcaaacggaaagccatccagtgtg
attaagtgggataccaagctaaagggccaagccacattccaggaaacacgcaaccccaat
ggcacagtcactatacgcagcaactatgtgattgtgccaagtcgtgagagtcaccgccag
aaactcacatgcattgtcacctacaatactgagcacttcagcgacagtgtcatcctcaat
gttcagtatgaaccagaggtaaagattgaaggttttgacgggaattggtacctgaaccgt
cagaatgtgaaactcacctgtgatgcagatgcaaatccagctgtcactggctaccattgg
aaactattgaatggatccctgcccaaaaacgtggaaatcagaaacaacactctgctcttc
agggggcccgtgacatatgacttcagtggcacatatatatgtgatgccaccaacagcatc
ggcactcgatctggcctagtagaggtcaatgtgacagaattccccaaccatatccttcga
ggcggcggtgacaatgaccagaagcaacccagtaccaatgctgcaatatggggtggtgtg
ggtggcctggttgtactgatcattggtgttgcattgctcatctacttcctgcggcgtcgg
cagcgcaccttcaaaggcgactacagcaccaagaagcatgtttttggtaatggctacagt
aaggcgggctctgtgcctgctcatccctctgtgcccaagaacctgcagtacccagatgac
tcagacgatgagaagaaggcctctcagattggggggccaggggccttcgagggcacagaa
cgtgatttcgatggtaactctgaagacctaaagagaccctatttcactgtggatgaaggt
gagagccatgattacgatgagcggactctcgccttccagtatgagcccgagtctgagatt
gcagatgacatggtatcccaaactgatggctctgtcatttcaaagaaagagtggtatgtg
tag
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