KEGG   Pangasianodon hypophthalmus (striped catfish): 113526587
Entry
113526587         CDS       T05759                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03271  Virion - Rotavirus
phyp04145  Phagocytosis
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
phyp04514  Cell adhesion molecule (CAM) interaction
phyp04517  IgSF CAM signaling
phyp04518  Integrin signaling
phyp04530  Tight junction
phyp04810  Regulation of actin cytoskeleton
phyp04820  Cytoskeleton in muscle cells
phyp05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    113526587
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113526587
   04514 Cell adhesion molecule (CAM) interaction
    113526587
   04517 IgSF CAM signaling
    113526587
   04518 Integrin signaling
    113526587
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    113526587
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113526587
   04530 Tight junction
    113526587
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113526587
   04810 Regulation of actin cytoskeleton
    113526587
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    113526587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113526587
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113526587
   04515 Cell adhesion molecules [BR:phyp04515]
    113526587
   04090 CD molecules [BR:phyp04090]
    113526587
Membrane trafficking [BR:phyp04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    113526587
Exosome [BR:phyp04147]
 Exosomal proteins
  Proteins found in most exosomes
   113526587
Cell adhesion molecules [BR:phyp04515]
 Integrins
  Integrin beta subunits
   113526587
CD molecules [BR:phyp04090]
 Proteins
  113526587
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 RBP_receptor EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 113526587
NCBI-ProteinID: XP_026769570
LinkDB
Position
Unknown
AA seq 800 aa
MDLKLLFISALLGVICYSNAQPEGNECIKANAESCGDCIQVGAKCGWCTDTEFLKQGEPT
SARCDELESLRKRGCSVSMIENPQGSLKILKNKPVTNRKKGGEKLKPEDITQIQPQKLAV
SLRSGEPQTIDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGEQFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHHYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVVSVGEEGRKCSNISIG
DEVSFSINITVNGCPKQGKPQILKIRPLGFTEEVEIKLSFICDCECQKKGIVSSDLCHNG
NGTFECGACRCNKDRIGRECECWKDEVSSEDLEKTCRKDNGTDLCSNNGECVCGKCECKK
RDNPEEYYSGEYCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTSTCL
ASNNQICNGRGICECGTCRCTDPKFQGPTCEICPTCPGVCTEHKACVQCRAFGTGEKEDT
CERDCNYFTLIKVKDTDDLPQPVQAFPLMHCKERDANDCWFYYTYSVTNHTEVHVVETLE
CPAAPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKINAKWDMQENPI
YKSPVNKFQNPNYGHKTAAL
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggaccttaaactactttttatatcagcattgttaggagtcatatgctacagcaacgcc
cagccagaggggaacgagtgcatcaaggctaacgctgagtcctgcggtgactgcatccaa
gtaggggccaagtgtgggtggtgcacagatacagagttcctgaagcagggcgagcccacg
tcggcacgctgtgatgagcttgagtccttgagaaagagaggatgttcagtgtcaatgatt
gaaaaccctcaagggagcctaaaaatcctcaagaacaaacctgtgaccaaccgcaagaaa
ggaggcgagaaactcaaacccgaggacatcacccagatccagccccagaaacttgcggtc
agcttgagatccggagaaccacaaacaattgatctaaagtttaaaagagcagaggactat
cccattgacctgtactaccttatggacctgtcctactccatgaaggatgatctggaaaat
gtcaaaaacctgggcaccagcctgatgctggagatgtccaagatcacatcagacttcaga
attggttttggctcgtttgtggagaagacggttatgccctacatcagcaccacccctgct
aagctcctgaacccctgcaccggggaccagaactgcacaagtcccttcagctacaagaat
gtgctgaaactcaccagtaatggcgagcagttcaacacgctggtgggccagcagcagatc
tcaggcaatctggactctccagagggagggtttgatgccataatgcaagtcgctgtgtgt
ggggagcacattggctggagaaatgtcactcgtttgctggtgttttctacggatgcaggt
ttccactttgctggagatggaaagctaggtggaattgtgcttcctaatgatggcaaatgt
cacctggaaaacaacatgtacaccatgagccaccattatgattacccttcgatagcacat
ctggtgcagaaactgagtgaaaacaacatccagaccatcttcgctgtcacagaggaattt
cagcctgtttataaagaattgaaaaacctcattccaaagtctgctgtgggaacattgtct
gcaaactccagcaacgtgatcaaccttattattgatgcgtacaattctctgtcttcagag
gtgattctagagaacagcaaactgcctgaaggagtcaccatcacatatcagtcccgctgc
aagaatggagtagtgagtgttggagaggaggggcgcaaatgctccaacatctcaattgga
gatgaggtctccttcagcataaacatcaccgttaatggctgccccaaacaaggcaaacct
cagatcctaaagatcagacctctgggattcactgaggaagtggagatcaaactgagcttt
atctgtgactgtgagtgccagaagaaaggcattgtgagcagtgacctctgccataacggc
aacggcacctttgaatgtggcgcttgcaggtgcaataaggatcgtattggccgagagtgt
gagtgctggaaagatgaggtgtccagcgaggacctggaaaagacctgccgcaaggacaac
ggcaccgatctctgcagcaacaacggcgagtgtgtgtgtggcaagtgcgagtgtaagaag
agggacaaccctgaggagtactacagcggcgagtattgcgagtgtgacaacttcaactgc
gaccgctccaacaacaagctctgtggaggccacggccgctgtgaatgccgagtatgcatt
tgtgatgctaactacacaggaagtgcatgtgactgctccttggatacatcaacatgtctg
gcctccaataatcagatctgtaatggcagaggcatctgtgaatgtggaacctgtaggtgc
actgatcctaaattccagggacccacgtgtgagatctgccccacctgccctggagtctgc
actgaacacaaggcatgtgtgcaatgccgagcctttggtacaggagaaaaggaagacact
tgtgagagagactgcaactacttcactctgattaaagtgaaagatacagatgacttgcct
cagcctgtacaagccttcccactcatgcactgcaaggagagagacgctaacgactgctgg
ttctactacacctactctgtcactaaccacaccgaggtccatgtcgtcgaaactttagaa
tgcccagctgctcctgatatcatccccattgtggctggagtggttgcaggaatcgtgctg
attggattagcccttctgttaatctggaaattgctcatgatcattcatgaccgccgcgag
tttgccaagtttgagaaagagaaaattaatgccaaatgggatatgcaagagaatccaatt
tacaagagtcctgttaataagttccagaatccaaactatggacataaaactgcagctctt
taa

DBGET integrated database retrieval system