Pangasianodon hypophthalmus (striped catfish): 113526588
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Entry
113526588 CDS
T05759
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113526588
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113526588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-GeneID:
113526588
NCBI-ProteinID:
XP_026769576
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MADIKVSQHVPDSDLMPFFSATSAMEGQNCSHTEGTQMDTGMLGLASSAMESPLCTPWNF
SQIPFNLRWPAQSGSQQHCSSSTEEMHMDIFSHSTFPDLDMLNLPYNGDFFPDLVCIDDS
SLFSSSDSLSEYVDDSLPSVPTIWDINTPAQNQELNSSQFQGLNSLEDITAIISTPPLGS
IQSSQPQPEEEEEIEEEETEELGHVDTYADYKPSKSTIGNSHPDRVVETNTLSSVPPPDI
SYTLSIPVAIIESGVLSALQLEAIIYACQQHEVILQNKQRAGFLIGDGAGVGKGRTVAGI
ILENYLKGRRKALWFSVSNDLKYDAERDLQDIGAPNILVHALNKIKYGDTATSEGVLFAT
YSALIGESQAGGQRRTRLKQILDWCGPDFDGVIVFDECHKAKNATSTKMGKAVLQLQNKL
PLARVVYASATGASEPKNMIYMSRLGIWGEGTQFRTFDDFLHAIEKRGVGAMEIVAMDMK
VSGMYIARQLSFSGVSFRIEEISLDEDFTLVYNKAARLWAEALAVFTQAADLLGMVSRKS
LWGQFWSSHQRFFKYLCIASKVRCLVELAKKELEAGKCVVIGLQSTGEARTREVLDENEG
HLDKFVSAAEGVFQSLVQKHFPSEKQQREKAAASKRKRKPKGRQLKCPKQGADARSIINI
SDDSSTESDGVDSDCNWSPDSLQDNSDDVIFITQTNCHAARLEEIKQSLLNKISELGKEL
PLNTLDELIDKFGGPEKVSEMTGRKGRVVRRPDGSVRYESRAEHGHTIDHINIKEKDRFM
NGEKLVAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTA
PEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGNRALEKI
TKAILGHTESKVAPPKGYPGGDAMFFRDMKQGMMDVGIFCKEARFGISPEKDCTITKFLN
RILGLEVHKQNSLFQYFSDNFDYLIEKDKKEGKYDMGILDLAPGNDEISNETQEKFLTPG
NPQEGQVILYKISVDRGMPWEEALKKAHTLSNPDEGFYISHKLRGSHPCVLLAELGRGHH
LTVYKPNVGKQKQPENLENIQKKYRKVTPEEAKESWENQFTFSFRKCSHANWNGRCKKVD
EGQECLQGMRLRQYHVLCGALLCVWKRVADVVADVTSSSILQIVRLKTREHKQVGIKIPE
NCVAQVRDELGRMDKEVKRRRQEKEQQAQEQWLAEQRKRMLEERHRDLSVLYSQPPQLSS
LTNLYTGPLFSSFAPLSFKNPTEGALDLTNPGSSRLSPHNTGTDILSVPVSVPVTDFSMK
VFPKVEQQQQSQPALRDPAHQELFDFLNSPPEECHSALPSSSPDSLHTALTPSASLFSNS
TIHSSSSSSSLFSASLPSSSSSLSLFSSVPPSDKHSFANCTEDTAINAKEVLSSMLRSGS
ESRQSVIHFRVPESEHLS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggcagacataaaggtcagtcagcatgttcctgactctgacctgatgccttttttctct
gctacatctgccatggaagggcagaactgttctcatacagagggaacgcagatggatact
ggaatgttgggactggcctcttctgctatggagagtccgctttgcacaccatggaatttc
tcgcagatccctttcaacctgcgttggcctgcacagtctgggagtcagcaacactgttcc
agcagcactgaagagatgcacatggacattttcagccattccacttttcctgatcttgat
atgttgaatcttccctacaatggagacttctttccggaccttgtatgtatagatgacagc
tccctcttctcttcttctgactccctgtctgagtatgtagatgacagcttgccatctgta
cctaccatatgggacatcaatacaccagcacagaatcaggagctgaattccagccagttt
cagggtttaaacagtttagaggatatcactgctataatcagcacaccgcctctggggagc
attcagagttcacagccgcagccagaggaggaggaggagatagaggaagaggagacagaa
gagcttggccatgtagacacctatgctgactacaaaccttcaaaatccactataggaaat
tcgcatcctgaccgtgtagtggagaccaacactctttccagtgtccctccacctgacatc
agctacactctctccattcccgtggccatcatagaaagcggtgtgctctctgccctgcag
cttgaggcaatcatctatgcctgccaacaacatgaggtgatcctacagaacaagcagaga
gcaggttttctgataggagatggagctggagtgggaaagggccgcacggtggccgggatc
atccttgagaactacctaaagggaaggaggaaagcactctggttcagtgtatccaatgac
ctcaagtatgatgctgaacgagatcttcaggacattggtgctcctaatattctagtacat
gccttgaataagataaagtatggagacacagctacctcagaaggggttctgtttgctacc
tactcggctctgattggagagagccaagcaggaggccagcgtcgcaccaggctcaagcag
atcctggattggtgtggacctgactttgatggagtcatcgtgtttgatgaatgccataaa
gccaaaaatgccacatccaccaaaatgggcaaagctgtgctgcagctacagaacaagctt
cctctggccagggtggtgtacgccagtgccacaggtgcctccgagccaaagaacatgatc
tacatgagtcgtctgggcatctggggcgaaggaacacaatttaggacatttgatgacttc
ctccatgctatagaaaagagaggtgtgggtgccatggagattgttgccatggacatgaag
gtgagtgggatgtacattgcacggcagctgagcttctcaggggtgtccttccgcattgaa
gagatcagcttggatgaagacttcacactcgtttacaacaaagccgccagactgtgggca
gaagctttggccgtgttcactcaggcggctgatttgctcggtatggtgtccaggaagtct
ctgtggggtcagttctggtcttcccaccagcgctttttcaaatacctctgcatcgcctct
aaggtgcgctgtctggtcgagctggccaagaaggagttggaagctggcaagtgcgttgta
attgggctacagtccacgggtgaagcacgaacccgagaagttcttgatgaaaacgaagga
cacctcgacaaatttgtgtctgccgcagagggtgtgttccagtccctggtccaaaagcac
ttcccttcagagaaacagcaaagagagaaggcagcagccagcaagaggaaacgtaagccc
aaaggccggcagttgaagtgccctaagcagggtgcagatgccagaagcatcattaacatc
agcgatgacagcagcacagagtctgatggagtggacagtgactgtaactggtctccagat
tcactacaggacaatagcgatgatgtcatcttcattacacaaaccaactgtcatgctgct
cgtttggaggagataaagcaaagcctccttaataaaatctctgagcttgggaaagaacta
cctctgaacacattggatgagctcatagataaatttggaggtccagagaaggtttcagag
atgacaggacggaagggccgagtggttcggcggccagatggaagtgtgcgctatgagtct
cgtgctgagcacggccacaccattgaccacatcaacatcaaagaaaaggatcgcttcatg
aacggagagaagctggtggctataatctctgaggcggccagttcaggaatttctttgcaa
gcagacaggcgggtgaagaaccagcgcaggcgagtccacatgaccctggagttgccctgg
agtgctgaccgggccatccagcagtttggtcgcactcatcgctccaaccaagtcacagca
ccggagtacatcttcctcatctctgaactggctggcgaaagacgcttcgcttctattgtg
gctaagaggctggagagcctgggagctctgacgcacggtgaccgaagagcaacagagtct
agagacttgagcaagtacaactttgaaaataaatatggtaacagggctttagagaagatc
accaaagccattctgggtcacactgagagtaaggtggcccctcccaagggctatccaggt
ggtgacgccatgttcttcagagacatgaagcaaggcatgatggatgttggcattttctgc
aaggaggctcgctttggcatcagccctgagaaagactgcaccattactaagttcctcaat
cgaattttgggtctggaggtgcacaagcagaactctctctttcagtacttcagtgacaat
tttgactacctgattgaaaaggacaagaaggaaggcaaatatgatatggggatcttggat
ctggctcccggtaatgatgagatctccaacgagactcaagagaagtttctgactccaggc
aacccacaggaaggccaagtcattctctataagatcagtgtggacaggggcatgccctgg
gaggaggctctcaaaaaggctcatacactcagcaacccagacgaaggcttctacatctcc
cacaagctgagagggagtcacccatgtgtgctgctggccgagctgggcagaggtcaccac
ctgactgtctacaagcccaatgtgggcaaacaaaagcaaccggagaatctggagaacatc
caaaagaagtaccgcaaggtgactcctgaggaggcgaaggaaagctgggagaatcagttc
actttctccttcaggaaatgtagccatgccaactggaacgggaggtgcaaaaaggtcgac
gagggccaggaatgtttgcagggtatgcgcttgcggcagtaccacgtcctttgcggtgct
ctcctgtgtgtgtggaagcgtgtagctgacgtggtggcagatgtaaccagctccagcatc
ctgcaaatcgtacgcctcaaaaccagggagcacaagcaagtgggtataaagatcccagag
aactgcgtggctcaagtgcgagatgagctgggccggatggataaggaggtgaaaaggagg
cgtcaggagaaagagcagcaggctcaggagcagtggctggccgaacagcgaaagaggatg
ttggaagaacgtcacagagatctatctgtgctctactcccaacctccccaactctcaagc
ctgaccaacctttatactggccccttattctcttcttttgctcccctctcatttaaaaac
ccaacagagggcgccctggacctgacgaaccctggctcttctcgcctttccccgcacaac
acgggaacagacatcctctctgtgcctgtctctgtgcctgtcacggatttcagcatgaag
gttttcccaaaggtggagcagcagcagcagagtcagccggctctgagagaccctgcgcac
caggaattgttcgactttctcaactcgccgccagaagaatgccactctgcgcttccctct
tcttcaccggactctttacacactgctttaaccccctcagcgagcctcttctccaactcc
accatccattcttcctcctcatcatcatcccttttctctgcttcactcccatcatcttct
tcttcactgtcactcttttcctccgtgccaccgtcggacaagcactcatttgctaactgc
actgaagacaccgccatcaacgccaaagaggtgctgagcagtatgctgaggagcggctca
gagtcccgccagtctgtcattcacttcagagtacccgagtcagagcacctgtcctaa
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