Pangasianodon hypophthalmus (striped catfish): 113526600
Help
Entry
113526600 CDS
T05759
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113526600 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113526600 (bicra)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
113526600 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
113526600
NCBI-ProteinID:
XP_026769600
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MDDEDGRCLLDVICDPQALNDFLHGSETQLDTDDLLDGSSDPSNSFFSSTGEHVPEVQPP
AQLSTSEPSGLPRVSVDLDFLEDDDILVASPEEGDSESNGVGSNHEPCDILQQSLAEANI
TEQSLQEAEAELDLSSFGLTSLTQVVQPLPDASMPGVGIAGTTQIFPGQGTTTTPSSATT
DMLGSVLAHQGMQLQPQVMNKAISVQPFMQQVGLGNVTLQPISSLQTLPNGSQSGHLGIG
QIQVVGQSTVMTINPSGQHILTKTVGGYPLHQPGLDAASAGAQAGLGGSVLSSAGGLLIQ
GGKATLGSPSLNGPAICVSSTNTNSSGTTMAAPSGIVGFARGPLNTGTQSQTQNQVMQNV
IIQRTPTPIQPKPPQGSAIQPKSFKQQQQLPATHTLQNDANKALGVQQVPASAAQNVAFL
TGKPSSNVVLSTQTTTQGAQFSQALFKQHSNPTSGKPLSVHLLNQQGSIVIPSQAVLQGQ
NHQFLLPQLQTGGQILAQQSGGHIITSSGPGGQIIAANQILATNQNINLGQVLAPQGHPG
TAHILSGPIQLQPGQMGHPTLFQMPVSLAQSQNQAHQGHVQTVIQGMPIQSSLSIEGLSP
AVSLQPTLQQQAGGVTGNSSTGVAAIPQCQPSESITELGTSTEQAAQSQTQPQPSILTVQ
TGPSVSATMLIPSSTSPSSTVTTSTTSVSTVGLASQVQHSPGKVLFSPPSSSIILSQEPV
PMFLQQDQQHQAGKDPPASVGVPASVIVSGGSSGSAPTAHDGPLTETHPGENASPSLGPA
DMAALVNKVSSAAHQQQALKIQSASPSQSVVTHSVTPTLSDSPQPSQASPLIQIQSPHPP
QSRPPSQPQAQPPSQSQAPSRACTPSSIPPLFIIHNSIGGSPQPSQPVAQAPQQQIQPQP
IQVQIPQVLPQPVVLQQEQLPTSCSPKPPQAPSSQFHFVTPAVCATAGAVLKQQMPGLTA
EQQHHLQLINAQLQTMSSITQPSPQQKQLLEKLNQVQQNILLQAKQQQQQQQLQTQPQAS
QFSKLPDQPAAQLVNSSASSTVSASVTSLLQQKSVFIKSSVSGPNDTQVFPGTSGPSGVT
VNQGKPPLNLAQSVQAKPGVISAVGGLTLGKQGIQIQVLNSGLSQMSSLQPSAPVQTQTS
ALKRPLSVEPSKEARILEQLRKLQASVLHPDYSSPFHSFEDTLCRLLPYHVYQGMAPSPQ
DYRKVDDEFENVSSQLLKRTQAMVDKYRHLLFEESRRLGPSAEMVMIDRMFIQEEKIALN
QDRILAKEKPEEFVASSCMVNRVADSGVKPAAVELSSVKTGPAAVELSSVKSAVATAHVA
GTPAPASTSVTAAASANPVPVPFPPTKLVIKQGGGGALVSWSTSCTPMPSSVVRPCAKAT
GLSSERCLGPTSSSTHSADDDDDDDDDDDDALPQRTSKPPIKTYEARQRIGLKLKIKQEA
GFSKVVHNTALDPVHLQPQHTPLPQVPEPPSKTRPPVTQLSIVQRTSPPTSNSTSSITFS
AATTHAGSGTTTSSAAPPPSVSHGWSSLSSSLSSCTSSAQVNGTLEHYEVSGAKLNPTST
SAPQLTTCRLPLRKTYRKNVSPHHRPGVPGGGDVGPIPPAAPASSPPVERTVIASVKLEQ
QGVCKPPHTHTNPGPQGLASVEHEFYHGIRNAYHQQQQQQASDKEDEEDGNTGDHMGRVM
GQMSKNREWAVGTFRMDQHAPGPPSLGETSWARDSSLPAKRSKSDSPDMDNASFSSGSPP
LDNSLNEHLQCAIDSILNLQQGPPTRGAVDRVYAGNLTNQHQTHHRQGTASSSTSSYRHT
VTSSSSPSSSSITQHPQLGGRGQNGNLVSQTHSR
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggcaggtgcttgctagatgtaatttgtgacccacaagctctcaat
gactttcttcatggatcagaaacacagctggacactgacgaccttttggatggctcaagt
gacccgtccaactcattcttctccagcactggggaacatgttcctgaagtccaaccaccg
gctcagctgtcgacgagcgagccatctgggcttccccgggtcagtgttgatttggacttt
ctagaagatgatgacatccttgtggcctcaccggaagaaggagatagtgaaagcaatggt
gttgggtcaaatcatgaaccctgtgatattctgcagcagagtctggcagaagccaatatc
acagagcagagccttcaagaagcagaggctgagcttgacctcagctcatttgggctaact
agtctgacacaggtggtccaaccgttgcctgatgctagtatgcctggggtgggcattgca
ggaactacacagatctttcctggccagggcaccactaccacaccttccagtgcaaccacc
gacatgcttggctcagttctggcacaccaagggatgcagcttcaaccccaggtcatgaac
aaagccatcagcgtccagccattcatgcagcaagttggacttggaaatgtgacccttcaa
cccatttcaagtcttcagaccctaccaaatggaagccagtctggacatctgggcattgga
cagattcaagtggtgggtcaatccactgtaatgactatcaatccatcagggcagcacatc
ctgaccaaaaccgtgggcggctatcctctgcaccagcctgggcttgatgctgcaagtgct
ggagcccaggctggtcttggaggttctgtgcttagctctgcagggggactgttgattcag
ggaggcaaggctactcttgggtctccatcattgaatgggccagctatttgtgtcagcagc
actaacaccaacagcagtggtaccacaatggctgcaccgagtggaatagtgggatttgct
cgtggtcctttaaatacaggaactcagtctcagactcaaaaccaagtcatgcagaatgtc
atcatccagcggacaccaactccaatacagcccaaacctccccaaggaagcgccatccaa
cccaaatccttcaagcaacagcagcaactgccagccacacatacattgcaaaatgatgcc
aataaagctcttggggtgcagcaagtcccagcatctgctgctcagaatgtagccttcctc
actggcaagccaagttcaaatgtagtactgagtacacagaccaccacacagggggcacaa
ttctcccaagccctgtttaagcaacacagcaatcctacatcaggcaagcctcttagtgtt
cacttgctaaatcagcagggcagcattgtcattccttcccaggctgtcttacaagggcag
aatcatcagttcctcctgcctcagcttcagactggaggtcaaatcctggcccagcaatct
ggcggacacattattaccagttccgggccaggaggacaaattatagctgccaatcaaatc
ttggcaaccaatcaaaatataaatctaggacaggtattggctcctcaaggtcatcctggt
actgcccacattctttctggacccatacagcttcaaccaggtcagatgggtcaccccaca
ctattccagatgcctgtttctctagctcagtcacagaatcaagctcatcaaggacatgtt
caaactgttatacaaggcatgcctatacagagttccttgtcgatagagggcctcagccca
gctgtcagtttgcagccaacccttcagcagcaggctggtggtgttactggaaacagcagc
actggagtagctgccatcccccagtgccaaccaagtgagagcataactgaactgggtact
tccactgagcaagcagcccaatcccaaacccagccccaaccctctatccttacagtccag
acaggtccttcagtttcagccactatgttgattccctcctctacatctccatcttctaca
gtaactacatctacgacatcggtgagcacagtgggcttggcctcccaggtccagcacagc
ccaggaaaggtgttgttcagtcctccaagctccagcattatccttagccaggagcctgtg
ccgatgttcctgcagcaggatcagcagcaccaagcagggaaagacccacctgcctctgtg
ggtgtacctgcatctgttatcgtcagcggtggcagctctggttccgcccctacagcccat
gatggcccattaactgaaactcacccaggggagaatgcgagtccttcccttggccctgct
gacatggcagcattggttaacaaggtttcatcagctgcacatcagcagcaagctttaaag
atccaaagcgcatcaccgtctcagtctgtggttactcacagtgtgacgccgactctatca
gacagcccgcagccatcccaggcttctccccttattcaaatccagtcccctcaccctcca
cagtcccgacctccatctcagccccaggcacagccaccatctcagtcccaggcaccttct
cgggcgtgcacaccttcgtctataccgccactctttataatacacaattcgataggaggt
tctccgcagccatctcagccagttgcccaagctccacagcagcagatacagcctcagcca
attcaagtgcagataccacaggttcttcctcagccagtggttctccagcaggaacagctg
cccacctcctgctccccaaagcctccccaggctccttcatcacagttccattttgtgaca
cctgcagtgtgtgccacggctggggcagtgttgaaacagcagatgccaggtcttactgcc
gaacagcagcaccatttacagctgattaatgcacaactacaaacaatgtcatccatcacc
cagccttcaccacaacagaagcagctactggaaaagctcaaccaggttcagcaaaacatc
ctactccaggcaaaacaacaacaacaacaacaacaacttcagactcagcctcaggccagt
cagtttagcaaactgcctgaccagcctgcagcccaactggtgaactcttcagccagcagc
acagtcagtgcatctgtcacatctctgttgcaacagaagtctgtcttcatcaagtcatca
gtttcaggtccaaatgacacccaggtatttcctggaacttcggggccaagtggagtaaca
gttaatcaaggaaaaccccctctaaatcttgctcagtctgttcaggcaaagcccggggtt
ataagtgcagttggagggctgacattaggtaaacaagggatacagattcaggttctgaac
agtggactttcacagatgtcttccctgcagccttcagctcctgttcaaacccaaacttca
gctttaaaaaggcccttaagtgtggagccaagcaaagaagcacggatattagaacagctg
aggaagcttcaggcttctgtactgcatccagactacagctcaccttttcattcttttgag
gacacactctgccggctgttgccctaccatgtgtaccagggcatggctccctcccctcaa
gactaccgcaaagtggatgatgagtttgaaaacgtctccagccaacttctgaagcgcaca
caagcaatggtggataagtatcgtcacctgctgttcgaagaatcaaggaggctgggtcct
tctgcagagatggtgatgattgatagaatgtttatccaggaggagaagattgccctgaac
caggacaggatactggccaaggagaagccagaggagtttgtggccagctcgtgtatggtg
aacagggttgccgacagtggtgtgaagcctgcagcagtggaactgagctctgttaaaact
gggcctgcagcagtggaactgagctctgttaaatctgctgtagcaacagcccatgtagct
ggcaccccagctcctgcttctacctcggtgactgctgctgcctctgctaaccctgttcct
gttccatttccccccaccaaactagtgataaaacaaggaggagggggagcattggtatcg
tggtctactagctgcacccccatgccttcatcagtggtacggccttgtgcaaaagccaca
gggctgagctctgagcgctgtttaggccccacctcatcctccactcattctgcagatgat
gatgatgatgatgacgatgatgacgatgatgcacttcctcagcggactagcaagcctccc
atcaagacctacgaagcacgtcagcgaattgggttgaagttgaagattaagcaagaggca
gggttcagcaaagtggttcacaacactgcgttagacccggttcatttacagccacagcac
actccactaccacaagtccctgagccaccctctaaaacaagaccacctgtaacccagctg
tccatagttcaaaggacttcacccccaaccagtaattccacatcctctatcactttcagt
gcagcaacaacacatgcagggtctggaactacaacttcctcagctgccccccctccttca
gtctctcatggctggtcatcgttgtcctcgtccttatcctcctgcacctcttcagcccaa
gtgaatggcactctagagcactatgaggtgtctggggccaaactgaaccctacctccact
tcagcacctcagttgaccacctgccggctcccactacgcaagacgtaccgcaaaaacgtc
agccctcatcaccgaccgggagtgccaggagggggcgacgtgggacccattccaccagca
gcacctgcatcctctcctccagtggagaggacagttattgccagtgtgaaattggagcag
caaggtgtctgtaagccccctcacacccacaccaacccagggccacagggcctggcatct
gtagagcatgaattctaccatggaattagaaatgcctatcatcagcagcagcaacagcaa
gcctctgataaagaggatgaggaggatggtaatacgggggaccacatggggagagtcatg
gggcagatgagtaaaaaccgtgagtgggcagtgggcacatttcggatggaccagcatgca
ccaggccctccatctcttggtgaaacatcctgggcgagagactcatcacttcctgcaaaa
cgatctaaatcagattccccagacatggacaatgccagcttctcgagtggtagccctcca
ctggacaattcgctgaacgaacatctgcagtgtgctatagatagcatactgaatctgcag
cagggcccaccaacccgtggagccgtggacagagtctatgctggaaacttaaccaaccag
caccaaacccaccatcgtcagggcacagcatcttcatcaacatcatcgtatagacacact
gtcacttcctcttcctctccatcttcatcctccattacacaacacccacagttagggggc
cgaggacagaatggaaatctggtgtcacagacacatagtagataa
DBGET
integrated database retrieval system
