Pangasianodon hypophthalmus (striped catfish): 113526609
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Entry
113526609 CDS
T05759
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113526609 (nphp3)
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
113526609 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
TPR_10
NPHP3
NPHP3_hel
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_11
TPR_6
TPR_19
AAA_16
Uso1_p115_C
AAA_22
NACHT
KAP_NTPase
AAA_14
IFP_35_N
AAA_19
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
113526609
NCBI-ProteinID:
XP_026769638
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MGTASSLVSPGDVIEDGYGAEGGEACEIPVEVKPKARLVRSSFRRGPRVIGASFKSTGSV
ELEYAAEYERLRKDYEIFRVSKNNEIAAMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLESKLQQLQAA
GIQLYEPFDSDSDDNNTSVTTAGTQCEYWSGGILGSEPSMGSMMQLQQGHRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLIYTQETRAELQAFLQTHSP
GLKRFCENLGHFYLTVCFPEEEAALYATERQLELERSSVCVLLLKSSVSSCVMEDVEEAF
VRTPDSHPLLVYLNTGEKKVEFAGASCLSSATRDLLEKVNNADKAAKVKVVNHSGSAEEG
AALIYAQLEKIIKQELLGLELEDSTGLEDREESDSGDVLWDLHDEQEQTEAYQHICSASP
SLSFQKYIDGLNDMVAAPPPTPPLLVSGGPGSGKSLLLAKWIELQQKRSPNTLILYHFVG
PALSTSAEPVLIIKRLTVKLLQHFWSLSGLSMDPCKILEEFPRWLERLSSRHHGNIIIVI
DSIDQIQNAERHMKWLIDPLPANVRVLVSVNVESCPQAWRLWPTLHLDPLNPREVKSVLN
TVCLNTDMKPTKEQEKKLERHCRSASTCSALYVSLLARLLTYTRSSWTLDRMLHQSVLCQ
DTVALYRLSLKVVLDSLNADRERHVMRELLCLLYASHNGISESELLDVFPELHFPALSSL
LCSLQKLLIITFRCGLVRFQHPQACEAVMQEFLDGRRCCSLYREKLIQYFNQKLSENRVT
WRVADELPWLLQQQGDKCKLQFSLLNLFVSQNLYKRGHFAELLAYWQFVGKDKVSMAAEY
CDALKEFERNCDSEESMCRLANLYETLGRFLNDLGLLSQAVAPLQRSLEIRETALDPDHP
SVAQSLHQLAGVYVHWRKFGNAEQLYKQALEITENAYGAEHSSVARELDSLSLLYQKQNK
YEQAEKLHKRSVKIRQKMARQKGHMYGFTLLRRRALQLEELTLSKDSADCAKTLNELGVL
YYLQNNLDAAKVFLMRSLEMRQRVLGADHPDCAQSLNNLAALHCERRDYESAEQLYEKAL
EIRKRALAPDHPSLAYTLKHLAMLYKRRGKMEKAVPLYELALEIREKSFGPKHPSVATAL
VNLGVLYCQLKKHNEALPLYERALRVYEDSLGRLHPRVGETLKNLAVLSYEEGDFEKAAE
LYKRAMEIKEAETSLVCEKAPSPHSSSGDTFSLQSPTLLPHTPR
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcctcatctttagtaagtcccggagatgtgattgaggatgggtacggggct
gagggtggagaagcgtgtgagattcctgtggaagtcaagccaaaagcacgattggtacgc
agctcattccgacgtggcccacgggtcatcggtgccagcttcaaatccacaggctctgtg
gagctggaatacgctgctgaatatgagcgtctccggaaggactatgagatcttccgtgta
agcaagaacaacgagatagcagccatgcagaagaaagaggccaagctggatgaggagaac
aagaggctacgtgctgagctgcaggctttgcaaaagacctaccagaagattctcagagag
aaagaaagtgctttggaggcaaaataccaggccatggagagagcagccacctttgaacat
gaccgagacaaagtgaaacggcaatttaagatcttccgtgagaccaaagaaaaggaaatt
caggatttgttaagggcaaagcgtgatctggagtccaaactgcagcagctgcaggctgca
ggtatccagctgtacgagccttttgactccgactctgatgacaacaacacaagtgtcaca
actgcaggcactcagtgtgagtactggagtggaggcattctgggtagtgagccttccatg
gggagtatgatgcagctgcagcagggtcacagagggcctgagtttgcccacagtctcatc
gatgtggaggggccattcgccaatgtcagcagagatgattgggatgcagcagtggccagt
ctgcttcaggtttctccccatgtatctcaggctttatggagtaacacagtccgctgttac
ctcatctacactcaagagaccagagcagaactccaagcctttttacaaactcattctcct
ggtttgaagaggttttgtgagaatttgggccatttctacttaactgtgtgtttccccgag
gaagaagctgctctgtacgctactgaacgccagctggagcttgagaggagctcagtgtgt
gtgctgctgctcaagtcctcagtgtcaagttgtgtaatggaagatgtggaggaggcattt
gtacgcactccagactctcatcctttgctagtttatctaaatacgggagaaaagaaagta
gaatttgcgggggcttcctgtctgagctcggccactagagacctgctggagaaagttaac
aatgcagacaaggccgctaaggttaaggtggtgaaccattcaggctcagcagaggaggga
gcagcacttatttatgctcagctagaaaagattataaagcaggaactgttgggtttggag
ctagaggacagcacaggactggaggacagagaagaatcagactctggtgatgtgctgtgg
gatttacatgatgaacaggagcagactgaggcctaccagcacatttgcagtgcttcacct
agtctcagctttcagaagtacattgatggtctgaatgatatggttgctgctcctcccccc
actcctcctttactagtgtcaggaggaccaggctcgggcaaatctctccttcttgctaaa
tggatagagctacagcagaagcgctcccccaacacactgattctctatcactttgtgggt
cctgctctatccacaagtgcagagcccgtcctcatcatcaaacgcctcactgtgaagctt
ctgcagcatttctggtcactctcaggcttgtccatggacccctgtaagatcctggaggaa
tttcctcgctggctggagagactgtcctcacgccatcatggcaacattattattgtcatt
gactccattgaccaaatccagaatgcagagcgacatatgaagtggctgattgatccactt
cctgctaacgtcagagttctggtgtctgtcaatgtagagtcatgcccacaggcttggagg
ctgtggcccactttacacttggaccctctcaatccacgagaagtgaaaagtgtcctcaac
acagtgtgtctgaacactgacatgaaacccacaaaagagcaggaaaagaaattagaaaga
cactgccgttccgcttccacctgcagtgcactgtacgtctcactcctggccaggctcctc
acctacactagatcatcctggacattggacagaatgctacatcagagtgtgttatgtcag
gacacagtggctttgtacagactcagcctgaaggtggtactggattcactgaacgcagac
agagagagacatgtcatgagagaattattgtgcctgctctatgccagtcataatggcatt
agtgaatctgaactcttggatgtttttccagagctgcatttcccagcgctctcctctctg
ctctgcagtctgcaaaaactcctcatcatcaccttcagatgtggccttgtccgctttcag
cacccgcaggcgtgtgaggctgtaatgcaggagttccttgatggaaggagatgttgctcg
ttgtacagagagaaactcattcagtattttaaccagaagcttagtgagaacagagtgacc
tggcgtgttgctgatgagttgccatggttgctgcagcagcagggggacaaatgtaaacta
cagttcagtctactcaacctgtttgtctcccagaatctctacaagaggggtcatttcgca
gagctgctggcatactggcagtttgttgggaaggataaagtgtccatggcagctgaatat
tgtgatgctctaaaggagtttgagcggaattgtgacagtgaagaaagcatgtgcagactg
gccaacctgtatgagaccctcggccgattccttaatgacctgggtctcctcagtcaggca
gttgcacccctgcagcgctctctagagattcgtgagacagctctggatccagatcacccc
agtgtggcacagtcactgcaccagttggctggagtttacgtccactggaggaagttcggc
aatgcagagcaactgtacaagcaggcactggagatcactgagaatgcatatggagctgag
cattcaagtgtggcaagagaactcgactccctctcactcctgtaccagaaacaaaacaaa
tatgagcaggctgagaaactgcataagagatcagtcaaaatcaggcagaaaatggctcgt
caaaaaggccacatgtacgggtttactctactgcgtcgccgagcgctgcagttggaagaa
ttgactctcagtaaagactcagccgactgtgccaagactctcaatgaacttggtgtcctc
tactacctccagaacaaccttgatgcagcgaaggtgttcttgatgcgttcattggagatg
cggcagcgtgtgttgggcgctgatcacccggactgtgcacagtctctgaataacctggct
gctctgcactgtgagaggagggattacgagagcgctgagcagctgtatgagaaagcactg
gaaatccgcaaacgagccctcgctccagaccacccatctctagcctataccctcaaacat
cttgccatgctctacaaacgcagggggaagatggagaaggcagtgcctctctatgagttg
gctcttgagatccgagagaagagctttgggcccaaacaccccagtgtggctacagctctt
gttaatctcggtgtgctctactgccagctgaagaagcacaacgaggcattaccactgtat
gagcgggctctcagagtgtatgaggatagccttgggcgactgcaccctcgagtaggagag
accctaaaaaatctggctgtgctcagttacgaggaaggggattttgagaaagccgctgag
ctgtacaaacgagccatggagatcaaggaggccgaaacgtctttggtgtgtgagaaagca
ccatctcctcactcatccagcggcgacacattcagcttgcaaagccccaccctcctacct
cacacccccaggtga
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integrated database retrieval system
