Pangasianodon hypophthalmus (striped catfish): 113526645
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Entry
113526645 CDS
T05759
Symbol
gabpb1
Name
(RefSeq) GA-binding protein subunit beta-1
KO
K09454
GA-binding protein transcription factor, beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113526645 (gabpb1)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113526645 (gabpb1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
113526645 (gabpb1)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
113526645 (gabpb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
113526645
NCBI-ProteinID:
XP_026769695
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MSLVDLGKKLLEAARSGQDDEVRILMANGAPFTTDWLGTSPLHLSAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLQHGADVNAKDMLKMTALHWAVEHGHGDVV
ALLLRFGADVHAQSKFGKTALDIALDNNNEDLAEILQVAMQNQINTNPESPDMLTIHTAS
PQFIIGPGGVVNLTGLISPSNTAKPTGTHTHTH
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtggatctggggaagaagttgctggaggcggctcgctctggacaggatgac
gaggttcggatcctcatggccaacggagctccgttcaccacagactggctgggcacatcg
ccgctccacctctcagctcagtacggtcactactcaaccaccgaagtgctgctgcgcgcc
ggcgtcagccgagacgctcgcaccaaagtggaccgaacccctctgcacatggctgcctcg
gaaggccacgcctccatcgtagaggtgctgctgcagcacggcgccgatgtgaatgctaag
gacatgttgaagatgacggctctgcactgggcggttgaacatggacatggtgacgtggtg
gcgctgctgctgcggttcggcgctgacgttcacgctcagagtaaattcggcaaaacggcg
ctcgatattgcgctcgacaacaacaacgaggacctggcggaaatcctgcaggtggcgatg
cagaaccaaatcaacacaaaccccgagagtcccgacatgctgaccatccacaccgcgtca
ccccagttcatcatcggcccggggggagtggtcaacctgacgggcctcatctccccctcc
aacaccgcgaaacctacaggtacacacacacacacacac
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