Pangasianodon hypophthalmus (striped catfish): 113526754
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Entry
113526754 CDS
T05759
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03020
RNA polymerase
phyp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113526754 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
113526754 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113526754 (polr2d)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113526754 (polr2d)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
113526754 (polr2d)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113526754 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
113526754
NCBI-ProteinID:
XP_026769875
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MAAAGATNVGDIEEDASQLSFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSEVF
MKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLEGR
FEDEELQQILDDIQTKRSFQY
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcaggagcaacgaacgtgggcgatattgaagaagacgcctcgcagctgtct
ttccccaaagagtttgaaaatgctgagactctcctgaactctgaggtccacatgctcctg
gagcaccgcaaacagcagaacgagagcgctgaagatgaacaggagctctccgaggtcttc
atgaagacgctgaactacacggcccgcttcagccgcttcaagaaccgggagaccatcgcc
agcgtgcgcagtttactcttgcagaagaagctacataaattcgagctggcgagtttggcc
aatctgtgtcctgaagctgcagaagaagcgaaagcactcattcccagcttggaaggtcga
ttcgaggatgaagagctgcagcagattctggatgatattcagaccaaaagaagctttcag
tattga
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integrated database retrieval system
