Pangasianodon hypophthalmus (striped catfish): 113526760
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Entry
113526760 CDS
T05759
Name
(RefSeq) tripartite motif-containing protein 35-like isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113526760
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113526760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
U-box
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
SPRY
zf-RING_10
CYP38_PsbQ-like
Sina_RING
zf-Nse
PRY
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
113526760
NCBI-ProteinID:
XP_026769885
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MASSLEDDLSCPVCCELYQDPLLLCCGHTFCRQCLRKHWNVNTSRTCPVCRTVSLQEPVA
NLALRNTCESYRREKERERKERESDGEVKCAQHGEKVQFFCKTDDEVICSKCRKESHRLH
RVQLLTHAARQRKDRIKAALRPAEKALQSLKNGTSQKAQIAKYIQSQAQQAEKQIKTEFE
KFHHFLRKEEEARMTALKKEVARKRGKVEERIEREILLLSDRVREVEEEMETEDATFMQN
YNFVLQRAQCTMLDSELHSENLINMAEHVGNLGYRVWEKMTDIFLYYPVLLDLNSAPEDF
FISDDLASVGKSSYIRPNPIPFHGNRLVLGSEGYSDGFHCWNVEVGDSKHWTLGVCQRSA
GMNLVQPLTAERGFWGLSRNRESYMLLTSCKYSFRIRKKPRTVQVQLGWWYTIGNLNISR
MVRFVDVSDGSVIACYTGIPNGVLLFPFLIPEERFSYLRIAPANPALVIQRTFVEREKSQ
MPVYLIYLSLVGLIIFMLLFGGSE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctctctagaagatgatctctcgtgcccagtgtgttgtgagctttatcaggat
cctctgctcctctgctgtggacacactttctgccgccaatgtctcagaaaacactggaat
gtaaacaccagtcggacatgtcccgtgtgtcgcacggtgtctctgcaggaacccgtggcc
aacctggctctgaggaacacctgcgagtcctatcggagggagaaagaaagggagaggaag
gagagagagagtgacggtgaagtcaaatgtgctcaacatggagagaaagtccagttcttc
tgtaaaactgatgatgaggtcatatgttcgaagtgcaggaaagaaagtcacagattgcac
agagttcagcttctcacacatgctgcacgacaacgcaaggaccgaattaaagctgcactc
cgtccagctgaaaaagctctgcagtctctaaagaatggcaccagtcaaaaagctcaaatt
gccaagtacattcagtctcaggcccagcaggcagagaagcagataaaaacagaatttgag
aagtttcaccatttcctcaggaaagaggaggaggccagaatgacagcactgaagaaagaa
gtggcaagaaagagagggaaggtggaggaaaggatagaaagagagatattgcttctttct
gacagagtgagggaggtggaagaagaaatggagactgaagatgccacatttatgcagaat
tataactttgtactgcagagagctcaatgcacaatgttggattcagagttacattcagaa
aatctcatcaacatggctgaacatgtggggaatctgggataccgagtgtgggagaagatg
acggacatcttcctttactacccggtcctcctagatctaaacagcgctcctgaggacttt
tttatatcagatgacctggcaagtgtaggaaagtcatcctacatccggccgaaccctatt
ccatttcatgggaaccgcttggtgctgggatctgagggatacagtgatggcttccactgc
tggaacgtcgaggtgggagacagtaagcactggactctcggcgtgtgtcaacgctcggcc
ggcatgaatttggtacaacctttgacagctgaaaggggcttctggggtctcagcagaaac
agggaatcctacatgcttctgacatcctgcaaatactcgttcaggatacgcaagaagcca
agaacagtgcaggtgcaactgggatggtggtataccataggcaacctgaacataagtcgg
atggtgagatttgtggatgtcagcgatggatctgtgattgcatgttatactggaattccc
aatggggtgctgttgtttccattcctgatcccagaagagcgtttttcttatctgcgcatt
gctcctgctaatccagccctggtcatacagcgcacatttgtagagagagaaaaaagtcag
atgcctgtttacctaatatatttgtccctagtgggtttgatcatttttatgttattgttt
ggagggagtgagtga
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integrated database retrieval system
