Pangasianodon hypophthalmus (striped catfish): 113526764
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Entry
113526764 CDS
T05759
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113526764 (irf2bp1)
04121 Ubiquitin system [BR:
phyp04121
]
113526764 (irf2bp1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
113526764 (irf2bp1)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Atypical E3
113526764 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
113526764
NCBI-ProteinID:
XP_026769893
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MSSSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIEMLIDTARQLK
RTHVMQDGRSPGPQPGGKHGPGAKDGALDGGRNTAERFERSRGDFVPARLPNGLPRLEDG
AVAEVSRQSPNARRTMVAGVSPNLMAQGIVGTPHGLLIGARSSGPPLAISAPMLSELGKR
QALGVGMSFMSSDFEKDLKEKQRNAEELSESVRNRADDWAGRPKSVRDTLLALSNCAPFN
VRFKKDHGLVGRVFAFDAKLGVDFELKVFVEYPCGSGNVFSSLLALVKQMFQDSQKDSGK
VISSGFKYIEYEKRHGTSDWRLLSELLSDAVRAFKEPPAPDSLPQPFVDAACAMLPTALC
HLGRPGQARMRRRKASPDPDGAERMPSEEQLRQHWYPGMSAHIPTSSLASAMPGQPPNLQ
EVVPVSHGSDPSPISALMSVADNVGAISQSPKDMPGSSGAHASSASPSSSGQRRLASRNG
ENGSGTAAVATAMPPGAAADQGSEISGASGPPLCCTICHERLEDTHFVQCPSVPVHKFCF
PCTREFIRNQGSGSEVYCPSGDKCPLVGSNVPWAFMQGEISTILAGDVKVKKERDP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcttcctcctcgcaggcatcttccaggcggcaatggtgctatctctgcgac
ttacccaagatgccttgggccatgatttgggattttagcgaagctgtgtgtcgcgggtgt
gtgaattatgaaggtgcagacaggatagaaatgctaatagacacggcgagacagctcaaa
cgcacccatgtgatgcaggacggaaggtctccaggtccccagccgggtggtaaacacggc
cctggggcgaaagatggcgcactggatgggggcagaaacactgctgagcgatttgaaagg
agcagaggagactttgtacctgctagacttcccaatggactgcccaggttggaggatggt
gctgttgcagaggttagcaggcaaagtcccaatgcgaggaggacgatggtggcaggtgtg
tcacccaatttgatggcccaagggattgtgggtacaccgcatggcctcctgatcggcgcc
aggtccagcggtccaccgctggccatatctgccccaatgttgagcgaacttgggaagaga
caggcgttgggtgttgggatgtcgttcatgagctcagactttgagaaggatctgaaggag
aaacagaggaatgctgaagaactttccgaaagtgtccggaaccgggctgatgattgggct
ggacgtcccaaatctgtgcgagacactttgctggcgctttccaactgcgcaccgttcaac
gtgcgctttaagaaagaccatggccttgtcgggagggtgtttgcgtttgacgccaagctt
ggtgtggattttgagctcaaggtgtttgtcgagtacccgtgtggctcaggcaacgttttc
tccagcctgctggcgttggtgaagcagatgttccaggatagccaaaaagactcaggcaaa
gtgatcagctcgggcttcaaatacatcgaatatgagaagcggcatggcaccagcgattgg
cgtctcctttctgagctactcagcgacgctgttcgggcatttaaagaaccgccagcccct
gattcactccctcaacctttcgtggatgctgcctgtgccatgttacccactgcgctctgc
catctcggacgtcctggccaagctcgaatgcggcgccgaaaagcttctccggatccggat
ggcgctgagaggatgccctcagaggagcaattacgccagcattggtaccctggcatgagc
gcccacattcccaccagttctctcgccagcgctatgcctggccagcctccaaatctccag
gaggtggttcctgtttcccatggcagtgatccttcacctatcagcgccctcatgagcgtt
gcagacaacgttggtgccatcagccaatcgccaaaagacatgccgggaagcagtggcgcc
cacgcttccagcgctagcccttcttcatctgggcaaaggcgactggcatcacgtaacggt
gaaaatgggtcgggaacagccgcggttgccacagcaatgcccccaggtgcagcggcagac
caaggatctgaaatctctggagcatctggacctcctctttgttgcaccatttgccatgaa
aggcttgaggatacacactttgtccagtgcccttcagtacccgtgcacaagttctgcttc
ccttgtaccagagaattcatccgtaatcagggctcagggagtgaggtgtactgcccaagt
ggtgataaatgcccactggtgggctccaatgtaccctgggcattcatgcagggggagatt
tccaccatcttggctggagatgtcaaagtcaagaaggagagggacccttaa
DBGET
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