Pangasianodon hypophthalmus (striped catfish): 113526807
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Entry
113526807 CDS
T05759
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04517
IgSF CAM signaling
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113526807 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113526807 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113526807 (sptbn4)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113526807 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
113526807 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
CAMSAP_CH
Snapin_Pallidin
YdjO
Motif
Other DBs
NCBI-GeneID:
113526807
NCBI-ProteinID:
XP_026769967
LinkDB
All DBs
Position
Unknown
AA seq
2564 aa
AA seq
DB search
MANAATDLDNAEAQRQLNNNNRPSSTGFWESESTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATYNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAIEAE
KIIQRYEALASDLLEWIEKTISIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERMGAV
VELAMEMESEGYYDIRRIMARKDNILKQWDLLKELVTARKTRLEKNLALQKTFQDMVYMI
DWMEEMQMKLLSKDFGKHLLEVEDLLQKHTLQEADITVQADRVQTLNAAALKFTTIDGYQ
PCDPQVICNRVNHVSTCLEELKQLAAKRRSELEDSRELWVFFQEVEECECWMREKISILN
TQSCGKDLSSVLKLLQKHKSLAGELLARRALLQQTMKKGKQILTQKRLHSAGINDKLMEV
KEDWKRLEDQAAMRLGHLQEALDFFQFSAEMDDQLAWLQDAYRLVSSDDFGHDEFSTQSL
LKKHIRVREEVDKHRQNVVALRKHAVVLPLHYGELEEVKERIQEVERVYSEVAEVAVMRQ
QWLNDALAVYRMFSEVNACELWIDEKEKWLNKMEVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNLIVQQLLDSDHPSSTEVRGCQDHLNSRWNHMVELVEQKKDHLDSILRIQNYLL
ECSEIKSQIQEKRKAIDATQYSGSDLGSVLALQRRLSTMEGALAVLEPKLIHLQQEAEDL
ATSQPHKAEEILIPFEAVSVEWDELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWMVQKQ
TEAASNELPESLDEAERLINLHAALNEEIRSYEEDFERLQAVRELLDSEDTLLANAALHQ
WLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKDVKQAEAFLNNQESSLAHVELPTTVE
TVEAAIKKHKEFSMAMELNLHRIKAVIEAGESLISQNNIYSERIRDRVDLLITRGNQNRE
VAQQWLRKLTDQWELQRFMQDCHELGDWVMEKMLMARDSTCDDTQQLHKKWLKHQTFMAE
LTQNKEWLDKIQKEGERLMAEKPELSSMIQQKLGEIRECWLELENLTQVKALQLFENDRA
QQIAQNYSRLNERVQQLEMQLSHCDHGHDLTSVNKQLKKLQMMERQMEEWCNEVCDLQMQ
SSSLPEEYVMTDAVTERQAEVEARIVRLIEPLKERRRILLASKEVHQVRRDLQDEILWVQ
ERLPLATLQETGSSLQAVQQLMKKNQSLQRELESHRGHVEEVMERASMFSSVRTTEAECV
SALMEDLHSLWGTLWAETERKQLHLDSMYHAQQYYSDITEVEAWLSEQELHMMNEEKGKD
ESSTLQLLKKQLALEQTIEDYAETIGLLSQQCRQLLELGHPDSEQISKRQSQIDRLYVSL
KDLVEERKCRLEQQYWLFQLHREVEELEQWIAEREISASSTELGQDYEHVTILQEKFTEF
ASETGSVGQERVIAINQMVDELIDYGHADAAIIAEWKDGVNESWAELMELMETRAQMLAA
SHQLHKFFSDCREVITQIADKHRRLPEVREHQDGTANTSTLQRLMNTFEQDIQLLVGQVR
QLQENAAQLRTVYAGEKAEAIAMQEYEVMQAWKMLIMSCEDCRVQITTASDKLRFFSVVR
DQLMWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARNKSMVQCIEMGKTLLAAR
NPAAEEIKEKLEKVLAKQRELTEKWDKHWEELQHMLEVHQFAQEAMVAESWLSSQEAFLV
SQELGGSVDEVEQLIRRHEAFRKAAASWEERFSSLRRLTTVEKVKAEQSKLPPTPLLGRK
VFLDPQDSSPARSSPSSLHKQTIYEQGDYWGERNMAQPSTPSGSRRLGSTVSNYTPIVSG
SAMSRIQEARNTGVLGVAAGLGMPTEHKSTQIKPMRDTVRPQIDVNVMAEVVLQEPGCSG
GSRSELQVEQHRPHVKELRIERQLSNEQLIQARRDELPQEVWRERAERERRLERQTSSEQ
EVYETRRRDRHRLERQESSEHETGKEPSDRRSGGGEKRSTLADIVEQLQEREAAQARGEI
PRLPNGFPEKSSRPDRPRARDRPKPRRRPRPKDGAQGETRRSRSAPAQSSSSVPQPPSHH
AQREGFLFRKLDIESQKKSSNSRSWVNLYCVLSKGELGFFKDSKNTASTYNNEPRLNLSS
CSCDINLGYKKKKNVFTLKTKDGSEFLFHAKDEDDLNGWISSITTSISEHEEIAKWGQSH
PTTSSTDEGTRREGSRAEKSDRADRGSERSDKGEKMEKKSGKKK
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgccgcgacggatctggacaatgctgaagcccagagacaattaaacaacaac
aaccggcccagcagcacaggattctgggaaagcgaaagcactagtgctaaactgttcgaa
tgctcacgcattaaagcactagcagatgaaagggatgcggtgcagaagaaaaccttcact
aagtgggtgaactctcacctggctcgcgtctcctgccgcatctctgacctgtataatgat
ctgagagatggttacatgctcaccaggctactggaagtgctttcaggagaactactgccc
cgacctacgagaggcagaatgcgaatacactgtctggagaatgtggacaaagccttgcag
ttccttaaagagcagcgagttcatctggagaacgttggatctcacgatattgttgatggc
aaccatcgtcttacgctcggcctcatctggaccattatccttcgcttccagatccaagtg
attaaaattgagacagaggacaacagggagacacgctcggctaaagatgcgctgttactg
tggtgccagatgaaaacagcagggtatcctgaagtgaacattcacaatttcaccacatgc
tggagagatggattggctttcaatgcccttatacatcgacacaggcctgatttgattgaa
tttcacaagctgaccagatcgaatgccacatacaatctgcagcaagccttcaatatcgct
gagcagagtctcggactcactaaacttcttgatccagaggatgtgaacactgagaatcca
gatgagaagtctattataacatacgttgtgtcctactaccactacttctccaaaatgaaa
gctcttatagtagagggcaaaagaatcggaaaggttttggataacgccatagaagctgag
aagattattcagcgttatgaagctctggcctcagatctgctggagtggattgaaaaaacc
attagcatcattagcaaccagaagtttgctaactctctaacaggagtacaacaacagctg
caggccttcacaacctactgcactattgagaagcctataaagttccaggagaaagggaat
cttgaggtgctgctctttaccatccaaagcaaactcagagccaacaaccagaagccatat
gtgcctcatgatggaaagctcatttctgacatcaacaaggcatgggaaaggctagagaag
gcagagcatgaaaggggtgtggctttaaggaaagagctgattcgtcaggagaaactggag
ctacttgctcagcggtttgatcacaaaaccaccatgaggcaggcttggcttaatgagaac
cagcggcttgtttctcaggataattttggctatgatctaccagcagtggaggcggcaatg
aagaagcacgaggctattgaagctgacatctcatcatatgaggagcgcatgggtgcggtg
gtggagctggccatggagatggagagtgaaggatattacgatatcagacgcattatggct
aggaaagacaacatactaaaacaatgggatctgctgaaagagctcgtgacggctcgaaaa
acacggctagagaaaaacctagcactgcaaaaaaccttccaggacatggtctacatgatt
gactggatggaggaaatgcagatgaaactgctttctaaagactttgggaaacacctgctg
gaggtggaggacctgctgcagaaacacactctacaggaggcggacatcactgtacaggca
gatcgtgtgcaaacactcaacgctgctgcgcttaaatttaccaccattgacggataccag
ccatgcgaccctcaggtgatctgtaatcgtgtaaatcatgtaagcacttgtctggaggaa
ctgaaacagctagcagctaaacgtcgctctgagctagaggattctcgtgagctctgggtt
ttcttccaggaagtagaagagtgtgagtgctggatgcgtgaaaagatctcaatcctgaat
acacagagctgcggcaaagatctgagcagtgtcctgaagctcctgcagaagcacaagagt
ctagctggtgagctgttagctcgacgtgcgcttctccagcagactatgaaaaaaggaaag
caaattctcacgcaaaaacggttgcactcagctgggataaatgacaagttgatggaggtg
aaggaagattggaaaagactggaggatcaagccgcaatgagacttggccacctgcaggag
gctctggatttctttcagtttagtgctgaaatggatgatcagctagcatggcttcaagat
gcctacagacttgtttccagtgacgattttggtcatgatgagttttctacgcagtcgctg
ctcaagaagcatatccgtgttcgcgaggaggtggacaagcaccggcagaatgtcgtagca
cttcgcaaacatgcggtagtgctgccgcttcattatggagagctagaggaagtaaaggag
cggatacaggaagtggagcgtgtgtatagtgaggtggcagaggttgcggtgatgcggcag
cagtggctgaatgatgctcttgctgtctaccgcatgttcagtgaagtgaatgcatgtgag
ctttggattgacgaaaaggaaaaatggctgaacaaaatggaggttcctgagagacttgag
gatgttgaggtggtcgctcacaggtttgagagcctggaccaggagatgaacagcttgatg
ggaaggatcctggatgtgaatcttattgttcagcaactcttggacagtgaccatcccagt
tccactgaggtcagagggtgtcaggatcacttgaacagcaggtggaaccatatggtagag
ctggttgagcagaagaaagatcatttggactcaatccttcgcatccagaattatttactt
gagtgcagtgagattaaatcacaaattcaggaaaaacgcaaagccattgatgctacacaa
tattcgggcagtgacctgggcagcgtcttagcgctgcagcgacgtttgtctaccatggag
ggagctctcgctgttctagagcccaaactcatccatttgcagcaggaagcagaagacctt
gcaacctctcagccacacaaagcagaggagatccttattccctttgaggctgtgagtgtg
gagtgggacgaattgaaacgtactcttcagggttgtgaggattcgctgactgtagctggc
cggctgcagcagttcattcaggatctggattccttcttgacatggatggtgcagaagcag
acagaggcagcatctaatgagctgcctgagtctttggacgaagctgagaggctcatcaac
ctccacgcagctcttaatgaagaaattcgcagctacgaggaggatttcgagcgactgcag
gctgtgagggagctgttggactcagaggacactctactagcgaatgctgcactacaccag
tggctccagaaacttagtgcaggctggaacaaactgctacagatgtgggagagcaggagg
gatgagctagtgcaggcacacatctaccatcttttcatgaaagacgtcaagcaggctgag
gccttcctcaacaaccaggagtcctcattggcccatgtggagctccctaccacggtggag
acggtggaagcagccattaagaaacacaaagagttcagcatggcgatggagctcaatctg
catcggatcaaagctgtgattgaggcaggagagagtctcatcagccagaacaacatctac
tctgagcgcatccgagatcgggtggatttactcattaccagggggaatcagaaccgtgaa
gtggcacagcaatggctcagaaaactcaccgatcagtgggagctgcagagattcatgcag
gactgccatgagctgggtgactgggtgatggagaagatgctaatggcacgtgactcaacc
tgtgatgacactcagcaactccataagaaatggctgaagcaccaaacgttcatggctgaa
ctcacacagaacaaagagtggctcgacaaaattcagaaggaaggtgagcggctgatggcg
gagaaaccagagctgagttccatgattcagcagaagctcggtgagattcgtgagtgttgg
ctggagctggaaaacctgacgcaggtcaaagcgctgcagctgtttgagaacgaccgtgca
cagcagatcgctcaaaactactctcgactgaatgagcgtgtgcagcagctggagatgcag
ctaagccactgcgaccacggccacgacctcacctccgtcaacaagcagctcaaaaagctc
cagatgatggagcgacaaatggaggagtggtgtaatgaagtgtgtgatctgcaaatgcag
tcctcctctctccccgaggagtatgtgatgacagacgcagtgaccgagcgtcaggctgaa
gtggaggcgaggatcgtacgtctcatcgagcctctgaaggagagacgaagaatcctgctt
gcctccaaagaggtgcaccaagtgcgccgtgacctgcaggacgaaattctgtgggtgcaa
gagcgccttccgctagctaccttacaggaaactgggagtagtttacaggccgtgcagcag
ctcatgaagaaaaatcagagcctgcaaagggagctggagagccaccgggggcatgtggaa
gaggtgatggagcgagcgagtatgttctcatcggtgcgcacgactgaggcggagtgtgtg
agcgcattaatggaggatctacacagcctatgggggacactgtgggctgagacagagcgt
aaacaactgcacttagactccatgtatcatgctcaacagtactacagcgacattacagag
gtggaggcgtggctcagcgaacaggagctgcatatgatgaatgaggagaaaggaaaggat
gaatcaagtactctgcagctgctgaaaaaacagttagctttggagcagacgattgaggat
tacgctgaaaccatcgggcttttatcacaacagtgcagacaactactggagctcggccat
cctgacagtgaacagatcagtaaacgccaatctcaaatcgaccggctctacgtgtctttg
aaggacttggtggaagagcggaagtgccggttggaacagcagtactggctctttcaactc
cacagagaggtggaagaactggaacagtggattgctgagcgagagatctcagccagctcc
accgaactcgggcaggactatgaacatgtcacgatcctgcaggaaaagttcactgagttt
gcctcggagacaggaagtgtgggtcaggagcgagtgatagctattaatcagatggtggat
gagttgattgattatggccatgcggacgctgccatcattgctgagtggaaggacggagtg
aatgaatcatgggctgaactgatggagttgatggaaaccagagcacaaatgcttgctgcg
tcacaccagcttcacaaattcttttccgactgcagagaggtgataacacagatagctgat
aaacaccggagattaccggaagtgcgtgagcaccaggatggcacagcaaacactagcaca
cttcagagactcatgaacacatttgaacaggacatccagctattggttgggcaggtgaga
cagttacaggaaaatgccgctcagctccgtactgtttacgcaggggagaaggcagaggcc
atcgccatgcaggaatatgaagtgatgcaagcatggaagatgctgatcatgtcctgtgag
gactgccgtgtacagattaccacggcatcagataaactgcgatttttcagtgtagtgcgt
gatcagttgatgtggatggacagcatcatctgtcagataggaacgggagagaaacccagg
gatgtctcctctgtcgaggtgctcatgaactaccatcagagcctgaagagtgaagtggaa
gcacgaaataagagcatggtgcagtgtatcgagatgggaaagacactgctggctgccaga
aacccagcagcagaggagattaaagaaaaactggagaaagttctggccaaacagagagag
ctgacagagaaatgggataaacactgggaggaactacagcacatgttggaggttcatcag
tttgctcaggaggcgatggtcgctgagtcctggctctcatctcaggaggcattcctggtc
agtcaggaacttggtggcagcgtagatgaagtagagcagctcattcgccgacatgaggcc
ttcaggaaagcagcggcatcctgggaagagagattcagctcattacgccgcctcactacg
gtggagaaggtgaaggcagagcaaagtaagctgcctccaacccctttgctgggtcgtaag
gtttttctggaccctcaggattcatctccagcacgtagcagcccttcatcacttcacaaa
cagaccatttacgaacagggggactattggggtgagcgaaacatggctcagccatctaca
ccatctggatctcggagacttggctccacagtctcaaactacacgccaattgtgagtgga
tcagccatgtcccgaatccaggaggcaagaaacaccggtgtcctgggggttgctgcaggt
cttggaatgcccacagaacataaaagcactcagatcaaaccaatgcgcgacacagtgcgc
cctcaaatagatgtgaatgtaatggcagaggtagtgcttcaggagccaggatgcagtgga
ggcagtcgctctgaattgcaggtggagcagcatcgtcctcatgtgaaggaattgcgtata
gaacgtcagctttctaacgagcagctgattcaggcgaggagagatgagcttccacaggaa
gtatggagggaaagggcagagagagagaggaggctagagagacagacgtccagcgaacag
gaagtatacgaaactcggagaagagaccgacatcggcttgagagacaagaaagcagcgaa
catgagacgggcaaagaaccatcagatagacgatcaggaggaggagagaaacggtctacc
ttagctgacattgtggaacagcttcaagagagagaagctgcacaggctcgaggagaaatt
cctcgccttccaaacggatttccagagaagtcgtcacggccggaccgaccccgagctcga
gaccgaccaaaaccacggagacggccgcggcccaaagatggggcacagggcgaaacgcga
cgctcacgatctgctcctgcccagagcagctcgtctgtcccccagccaccttcccatcat
gctcagcgtgagggcttcctcttccgcaaattagacatagagagccagaagaaaagctcc
aacagcagatcttgggtgaatctgtactgcgtactgagtaaaggtgaactgggtttcttc
aaggactcaaagaacacagcgtctacatacaataatgagccacgtctcaatctgagcagc
tgctcctgcgacatcaaccttggctacaagaagaagaaaaacgtcttcacgcttaaaact
aaagacgggagcgagttcctattccatgcaaaagatgaggatgatctgaatggctggatc
tcgagtatcaccactagtattagcgaacatgaggaaatcgctaaatgggggcagtctcat
ccaactacctcatctacagacgaaggcacacggagggaaggcagcagagctgagaaatca
gacagggcagatcggggctctgaacgctcggacaagggtgagaaaatggagaaaaagagc
ggaaaaaagaaatga
DBGET
integrated database retrieval system
