Pangasianodon hypophthalmus (striped catfish): 113526807
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Entry
113526807 CDS
T05759
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113526807 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113526807 (sptbn4)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113526807 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
113526807 (sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Snapin_Pallidin
SLATT_6
YdjO
Motif
Other DBs
NCBI-GeneID:
113526807
NCBI-ProteinID:
XP_026769967
LinkDB
All DBs
Position
Unknown
AA seq
2564 aa
AA seq
DB search
MANAATDLDNAEAQRQLNNNNRPSSTGFWESESTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATYNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAIEAE
KIIQRYEALASDLLEWIEKTISIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERMGAV
VELAMEMESEGYYDIRRIMARKDNILKQWDLLKELVTARKTRLEKNLALQKTFQDMVYMI
DWMEEMQMKLLSKDFGKHLLEVEDLLQKHTLQEADITVQADRVQTLNAAALKFTTIDGYQ
PCDPQVICNRVNHVSTCLEELKQLAAKRRSELEDSRELWVFFQEVEECECWMREKISILN
TQSCGKDLSSVLKLLQKHKSLAGELLARRALLQQTMKKGKQILTQKRLHSAGINDKLMEV
KEDWKRLEDQAAMRLGHLQEALDFFQFSAEMDDQLAWLQDAYRLVSSDDFGHDEFSTQSL
LKKHIRVREEVDKHRQNVVALRKHAVVLPLHYGELEEVKERIQEVERVYSEVAEVAVMRQ
QWLNDALAVYRMFSEVNACELWIDEKEKWLNKMEVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNLIVQQLLDSDHPSSTEVRGCQDHLNSRWNHMVELVEQKKDHLDSILRIQNYLL
ECSEIKSQIQEKRKAIDATQYSGSDLGSVLALQRRLSTMEGALAVLEPKLIHLQQEAEDL
ATSQPHKAEEILIPFEAVSVEWDELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWMVQKQ
TEAASNELPESLDEAERLINLHAALNEEIRSYEEDFERLQAVRELLDSEDTLLANAALHQ
WLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKDVKQAEAFLNNQESSLAHVELPTTVE
TVEAAIKKHKEFSMAMELNLHRIKAVIEAGESLISQNNIYSERIRDRVDLLITRGNQNRE
VAQQWLRKLTDQWELQRFMQDCHELGDWVMEKMLMARDSTCDDTQQLHKKWLKHQTFMAE
LTQNKEWLDKIQKEGERLMAEKPELSSMIQQKLGEIRECWLELENLTQVKALQLFENDRA
QQIAQNYSRLNERVQQLEMQLSHCDHGHDLTSVNKQLKKLQMMERQMEEWCNEVCDLQMQ
SSSLPEEYVMTDAVTERQAEVEARIVRLIEPLKERRRILLASKEVHQVRRDLQDEILWVQ
ERLPLATLQETGSSLQAVQQLMKKNQSLQRELESHRGHVEEVMERASMFSSVRTTEAECV
SALMEDLHSLWGTLWAETERKQLHLDSMYHAQQYYSDITEVEAWLSEQELHMMNEEKGKD
ESSTLQLLKKQLALEQTIEDYAETIGLLSQQCRQLLELGHPDSEQISKRQSQIDRLYVSL
KDLVEERKCRLEQQYWLFQLHREVEELEQWIAEREISASSTELGQDYEHVTILQEKFTEF
ASETGSVGQERVIAINQMVDELIDYGHADAAIIAEWKDGVNESWAELMELMETRAQMLAA
SHQLHKFFSDCREVITQIADKHRRLPEVREHQDGTANTSTLQRLMNTFEQDIQLLVGQVR
QLQENAAQLRTVYAGEKAEAIAMQEYEVMQAWKMLIMSCEDCRVQITTASDKLRFFSVVR
DQLMWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARNKSMVQCIEMGKTLLAAR
NPAAEEIKEKLEKVLAKQRELTEKWDKHWEELQHMLEVHQFAQEAMVAESWLSSQEAFLV
SQELGGSVDEVEQLIRRHEAFRKAAASWEERFSSLRRLTTVEKVKAEQSKLPPTPLLGRK
VFLDPQDSSPARSSPSSLHKQTIYEQGDYWGERNMAQPSTPSGSRRLGSTVSNYTPIVSG
SAMSRIQEARNTGVLGVAAGLGMPTEHKSTQIKPMRDTVRPQIDVNVMAEVVLQEPGCSG
GSRSELQVEQHRPHVKELRIERQLSNEQLIQARRDELPQEVWRERAERERRLERQTSSEQ
EVYETRRRDRHRLERQESSEHETGKEPSDRRSGGGEKRSTLADIVEQLQEREAAQARGEI
PRLPNGFPEKSSRPDRPRARDRPKPRRRPRPKDGAQGETRRSRSAPAQSSSSVPQPPSHH
AQREGFLFRKLDIESQKKSSNSRSWVNLYCVLSKGELGFFKDSKNTASTYNNEPRLNLSS
CSCDINLGYKKKKNVFTLKTKDGSEFLFHAKDEDDLNGWISSITTSISEHEEIAKWGQSH
PTTSSTDEGTRREGSRAEKSDRADRGSERSDKGEKMEKKSGKKK
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgccgcgacggatctggacaatgctgaagcccagagacaattaaacaacaac
aaccggcccagcagcacaggattctgggaaagcgaaagcactagtgctaaactgttcgaa
tgctcacgcattaaagcactagcagatgaaagggatgcggtgcagaagaaaaccttcact
aagtgggtgaactctcacctggctcgcgtctcctgccgcatctctgacctgtataatgat
ctgagagatggttacatgctcaccaggctactggaagtgctttcaggagaactactgccc
cgacctacgagaggcagaatgcgaatacactgtctggagaatgtggacaaagccttgcag
ttccttaaagagcagcgagttcatctggagaacgttggatctcacgatattgttgatggc
aaccatcgtcttacgctcggcctcatctggaccattatccttcgcttccagatccaagtg
attaaaattgagacagaggacaacagggagacacgctcggctaaagatgcgctgttactg
tggtgccagatgaaaacagcagggtatcctgaagtgaacattcacaatttcaccacatgc
tggagagatggattggctttcaatgcccttatacatcgacacaggcctgatttgattgaa
tttcacaagctgaccagatcgaatgccacatacaatctgcagcaagccttcaatatcgct
gagcagagtctcggactcactaaacttcttgatccagaggatgtgaacactgagaatcca
gatgagaagtctattataacatacgttgtgtcctactaccactacttctccaaaatgaaa
gctcttatagtagagggcaaaagaatcggaaaggttttggataacgccatagaagctgag
aagattattcagcgttatgaagctctggcctcagatctgctggagtggattgaaaaaacc
attagcatcattagcaaccagaagtttgctaactctctaacaggagtacaacaacagctg
caggccttcacaacctactgcactattgagaagcctataaagttccaggagaaagggaat
cttgaggtgctgctctttaccatccaaagcaaactcagagccaacaaccagaagccatat
gtgcctcatgatggaaagctcatttctgacatcaacaaggcatgggaaaggctagagaag
gcagagcatgaaaggggtgtggctttaaggaaagagctgattcgtcaggagaaactggag
ctacttgctcagcggtttgatcacaaaaccaccatgaggcaggcttggcttaatgagaac
cagcggcttgtttctcaggataattttggctatgatctaccagcagtggaggcggcaatg
aagaagcacgaggctattgaagctgacatctcatcatatgaggagcgcatgggtgcggtg
gtggagctggccatggagatggagagtgaaggatattacgatatcagacgcattatggct
aggaaagacaacatactaaaacaatgggatctgctgaaagagctcgtgacggctcgaaaa
acacggctagagaaaaacctagcactgcaaaaaaccttccaggacatggtctacatgatt
gactggatggaggaaatgcagatgaaactgctttctaaagactttgggaaacacctgctg
gaggtggaggacctgctgcagaaacacactctacaggaggcggacatcactgtacaggca
gatcgtgtgcaaacactcaacgctgctgcgcttaaatttaccaccattgacggataccag
ccatgcgaccctcaggtgatctgtaatcgtgtaaatcatgtaagcacttgtctggaggaa
ctgaaacagctagcagctaaacgtcgctctgagctagaggattctcgtgagctctgggtt
ttcttccaggaagtagaagagtgtgagtgctggatgcgtgaaaagatctcaatcctgaat
acacagagctgcggcaaagatctgagcagtgtcctgaagctcctgcagaagcacaagagt
ctagctggtgagctgttagctcgacgtgcgcttctccagcagactatgaaaaaaggaaag
caaattctcacgcaaaaacggttgcactcagctgggataaatgacaagttgatggaggtg
aaggaagattggaaaagactggaggatcaagccgcaatgagacttggccacctgcaggag
gctctggatttctttcagtttagtgctgaaatggatgatcagctagcatggcttcaagat
gcctacagacttgtttccagtgacgattttggtcatgatgagttttctacgcagtcgctg
ctcaagaagcatatccgtgttcgcgaggaggtggacaagcaccggcagaatgtcgtagca
cttcgcaaacatgcggtagtgctgccgcttcattatggagagctagaggaagtaaaggag
cggatacaggaagtggagcgtgtgtatagtgaggtggcagaggttgcggtgatgcggcag
cagtggctgaatgatgctcttgctgtctaccgcatgttcagtgaagtgaatgcatgtgag
ctttggattgacgaaaaggaaaaatggctgaacaaaatggaggttcctgagagacttgag
gatgttgaggtggtcgctcacaggtttgagagcctggaccaggagatgaacagcttgatg
ggaaggatcctggatgtgaatcttattgttcagcaactcttggacagtgaccatcccagt
tccactgaggtcagagggtgtcaggatcacttgaacagcaggtggaaccatatggtagag
ctggttgagcagaagaaagatcatttggactcaatccttcgcatccagaattatttactt
gagtgcagtgagattaaatcacaaattcaggaaaaacgcaaagccattgatgctacacaa
tattcgggcagtgacctgggcagcgtcttagcgctgcagcgacgtttgtctaccatggag
ggagctctcgctgttctagagcccaaactcatccatttgcagcaggaagcagaagacctt
gcaacctctcagccacacaaagcagaggagatccttattccctttgaggctgtgagtgtg
gagtgggacgaattgaaacgtactcttcagggttgtgaggattcgctgactgtagctggc
cggctgcagcagttcattcaggatctggattccttcttgacatggatggtgcagaagcag
acagaggcagcatctaatgagctgcctgagtctttggacgaagctgagaggctcatcaac
ctccacgcagctcttaatgaagaaattcgcagctacgaggaggatttcgagcgactgcag
gctgtgagggagctgttggactcagaggacactctactagcgaatgctgcactacaccag
tggctccagaaacttagtgcaggctggaacaaactgctacagatgtgggagagcaggagg
gatgagctagtgcaggcacacatctaccatcttttcatgaaagacgtcaagcaggctgag
gccttcctcaacaaccaggagtcctcattggcccatgtggagctccctaccacggtggag
acggtggaagcagccattaagaaacacaaagagttcagcatggcgatggagctcaatctg
catcggatcaaagctgtgattgaggcaggagagagtctcatcagccagaacaacatctac
tctgagcgcatccgagatcgggtggatttactcattaccagggggaatcagaaccgtgaa
gtggcacagcaatggctcagaaaactcaccgatcagtgggagctgcagagattcatgcag
gactgccatgagctgggtgactgggtgatggagaagatgctaatggcacgtgactcaacc
tgtgatgacactcagcaactccataagaaatggctgaagcaccaaacgttcatggctgaa
ctcacacagaacaaagagtggctcgacaaaattcagaaggaaggtgagcggctgatggcg
gagaaaccagagctgagttccatgattcagcagaagctcggtgagattcgtgagtgttgg
ctggagctggaaaacctgacgcaggtcaaagcgctgcagctgtttgagaacgaccgtgca
cagcagatcgctcaaaactactctcgactgaatgagcgtgtgcagcagctggagatgcag
ctaagccactgcgaccacggccacgacctcacctccgtcaacaagcagctcaaaaagctc
cagatgatggagcgacaaatggaggagtggtgtaatgaagtgtgtgatctgcaaatgcag
tcctcctctctccccgaggagtatgtgatgacagacgcagtgaccgagcgtcaggctgaa
gtggaggcgaggatcgtacgtctcatcgagcctctgaaggagagacgaagaatcctgctt
gcctccaaagaggtgcaccaagtgcgccgtgacctgcaggacgaaattctgtgggtgcaa
gagcgccttccgctagctaccttacaggaaactgggagtagtttacaggccgtgcagcag
ctcatgaagaaaaatcagagcctgcaaagggagctggagagccaccgggggcatgtggaa
gaggtgatggagcgagcgagtatgttctcatcggtgcgcacgactgaggcggagtgtgtg
agcgcattaatggaggatctacacagcctatgggggacactgtgggctgagacagagcgt
aaacaactgcacttagactccatgtatcatgctcaacagtactacagcgacattacagag
gtggaggcgtggctcagcgaacaggagctgcatatgatgaatgaggagaaaggaaaggat
gaatcaagtactctgcagctgctgaaaaaacagttagctttggagcagacgattgaggat
tacgctgaaaccatcgggcttttatcacaacagtgcagacaactactggagctcggccat
cctgacagtgaacagatcagtaaacgccaatctcaaatcgaccggctctacgtgtctttg
aaggacttggtggaagagcggaagtgccggttggaacagcagtactggctctttcaactc
cacagagaggtggaagaactggaacagtggattgctgagcgagagatctcagccagctcc
accgaactcgggcaggactatgaacatgtcacgatcctgcaggaaaagttcactgagttt
gcctcggagacaggaagtgtgggtcaggagcgagtgatagctattaatcagatggtggat
gagttgattgattatggccatgcggacgctgccatcattgctgagtggaaggacggagtg
aatgaatcatgggctgaactgatggagttgatggaaaccagagcacaaatgcttgctgcg
tcacaccagcttcacaaattcttttccgactgcagagaggtgataacacagatagctgat
aaacaccggagattaccggaagtgcgtgagcaccaggatggcacagcaaacactagcaca
cttcagagactcatgaacacatttgaacaggacatccagctattggttgggcaggtgaga
cagttacaggaaaatgccgctcagctccgtactgtttacgcaggggagaaggcagaggcc
atcgccatgcaggaatatgaagtgatgcaagcatggaagatgctgatcatgtcctgtgag
gactgccgtgtacagattaccacggcatcagataaactgcgatttttcagtgtagtgcgt
gatcagttgatgtggatggacagcatcatctgtcagataggaacgggagagaaacccagg
gatgtctcctctgtcgaggtgctcatgaactaccatcagagcctgaagagtgaagtggaa
gcacgaaataagagcatggtgcagtgtatcgagatgggaaagacactgctggctgccaga
aacccagcagcagaggagattaaagaaaaactggagaaagttctggccaaacagagagag
ctgacagagaaatgggataaacactgggaggaactacagcacatgttggaggttcatcag
tttgctcaggaggcgatggtcgctgagtcctggctctcatctcaggaggcattcctggtc
agtcaggaacttggtggcagcgtagatgaagtagagcagctcattcgccgacatgaggcc
ttcaggaaagcagcggcatcctgggaagagagattcagctcattacgccgcctcactacg
gtggagaaggtgaaggcagagcaaagtaagctgcctccaacccctttgctgggtcgtaag
gtttttctggaccctcaggattcatctccagcacgtagcagcccttcatcacttcacaaa
cagaccatttacgaacagggggactattggggtgagcgaaacatggctcagccatctaca
ccatctggatctcggagacttggctccacagtctcaaactacacgccaattgtgagtgga
tcagccatgtcccgaatccaggaggcaagaaacaccggtgtcctgggggttgctgcaggt
cttggaatgcccacagaacataaaagcactcagatcaaaccaatgcgcgacacagtgcgc
cctcaaatagatgtgaatgtaatggcagaggtagtgcttcaggagccaggatgcagtgga
ggcagtcgctctgaattgcaggtggagcagcatcgtcctcatgtgaaggaattgcgtata
gaacgtcagctttctaacgagcagctgattcaggcgaggagagatgagcttccacaggaa
gtatggagggaaagggcagagagagagaggaggctagagagacagacgtccagcgaacag
gaagtatacgaaactcggagaagagaccgacatcggcttgagagacaagaaagcagcgaa
catgagacgggcaaagaaccatcagatagacgatcaggaggaggagagaaacggtctacc
ttagctgacattgtggaacagcttcaagagagagaagctgcacaggctcgaggagaaatt
cctcgccttccaaacggatttccagagaagtcgtcacggccggaccgaccccgagctcga
gaccgaccaaaaccacggagacggccgcggcccaaagatggggcacagggcgaaacgcga
cgctcacgatctgctcctgcccagagcagctcgtctgtcccccagccaccttcccatcat
gctcagcgtgagggcttcctcttccgcaaattagacatagagagccagaagaaaagctcc
aacagcagatcttgggtgaatctgtactgcgtactgagtaaaggtgaactgggtttcttc
aaggactcaaagaacacagcgtctacatacaataatgagccacgtctcaatctgagcagc
tgctcctgcgacatcaaccttggctacaagaagaagaaaaacgtcttcacgcttaaaact
aaagacgggagcgagttcctattccatgcaaaagatgaggatgatctgaatggctggatc
tcgagtatcaccactagtattagcgaacatgaggaaatcgctaaatgggggcagtctcat
ccaactacctcatctacagacgaaggcacacggagggaaggcagcagagctgagaaatca
gacagggcagatcggggctctgaacgctcggacaagggtgagaaaatggagaaaaagagc
ggaaaaaagaaatga
DBGET
integrated database retrieval system
