Pangasianodon hypophthalmus (striped catfish): 113527071
Help
Entry
113527071 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113527071
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113527071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113527071
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113527071
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113527071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Ntox15
Pox_Ag35
Maf
Motif
Other DBs
NCBI-GeneID:
113527071
NCBI-ProteinID:
XP_026770368
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MGPRKRGEKRRKEKNPIKMEETEDSTELGEPSEDITEEVVKEKKVKSKQKKYIGAHVSIA
GGIWKAVEASVEMGGHSFGLFLGSQRSWQRPALDQTAAVKFQQACAQHGFDPTHILPHGS
YLMNCGSPKEDVFGKSQAMLVDELGRCSVLGLTQFNFHPGASIDSSKEQCIERIAQAINH
AHQQIPAVCTVLENMSGQGSTVGGQFNELKSIIDHVRDKTRVGVCLDTCHAFAAGYDISS
AGGVKSVLDEFDQVVGLPYLRAVHLNDSKGKLGCRLDRHEDIGRGQIGISAFRNIVNEPR
LDNIPLILETPGRPGFEYDEQIQLLYSLCED
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggtccacgcaaaagaggagagaagaggagaaaagaaaaaaatccaataaaaatggag
gaaactgaagactcaactgaattaggtgaaccatcagaagacatcactgaagaagtggtg
aaggaaaagaaagtaaagtcaaaacaaaaaaagtacattggtgcccatgtctccattgca
ggaggcatatggaaagcagttgaagcaagtgtagaaatgggggggcacagttttggatta
tttttgggttcccaacgctcttggcaaaggcctgcccttgatcagaccgctgcagtgaaa
ttccagcaggcatgtgctcaacacggctttgacccaactcacattctgccccatggatct
tacctgatgaactgtggctctcccaaagaagatgtatttggtaagagccaggccatgctg
gttgatgaactcgggcgctgcagtgttttgggcctcactcagttcaacttccaccctggg
gcctccatagactccagcaaagagcagtgcatcgagaggatcgcccaagctataaaccat
gctcaccagcaaatacctgcagtctgtactgttcttgaaaatatgagtggacagggaagc
actgtgggtggacagtttaatgagctgaagagcataattgaccatgttcgagataagacg
cgtgttggagtatgtctagacacatgccatgcattcgcagcaggttatgacatttcttca
gcaggaggagtgaagtctgtgcttgacgaatttgaccaagtggttggactgccctacctg
agagcagttcatctcaatgactcaaaaggtaaattgggctgccgtttggatcgccatgag
gacattggccgtggacagattggcatctctgctttccgaaacattgtgaacgagcctcga
ctcgacaatatccctctcattcttgagacacctgggcgcccaggttttgaatatgatgag
caaatacagctcctgtattctctctgtgaggactag
DBGET
integrated database retrieval system
