Pangasianodon hypophthalmus (striped catfish): 113527102
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Entry
113527102 CDS
T05759
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113527102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113527102
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113527102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
CobT
Motif
Other DBs
NCBI-GeneID:
113527102
NCBI-ProteinID:
XP_026770414
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MASGDIDQLTEALAKTHVGEELSYKGQGRKLNDKQSVEEIVREIEQFQGLKALRLEGNTV
GVEAAQAISKALESKKDLQRCYWSDMFTGRLRSEIPSALKSLGSALMMSGAKLTELDLSD
NAFGPDGVKGIEALLKSTVCYTLQALRLNNCGMGIGGGIILASALTECYKQSSAAGSPLR
LKVFVAGRNRLENDGATALSQAFQLMGSLEEIHMPQNGINHPGITALATAVQHNPNLRVL
NLNDNTFTKRGAVAMAQALRQLCNVQVINFGDCLVRSEGAIALTAALRGLPGLKELNLSF
GEISEAAALVVARAIRDKADLEKLDLNGNCLGEDGCEALKEAMESMGMGDVLGSLSDDEG
EEEEDDEEEDGEDEDTEEEEEKEEDEQNCINGLKDECKGEGSPAKVSLCSADFLSFLQSP
TSEKLLNLGAKRVQLFQQQVDFSDATKIADIFLQLSSVYKEDAEVKQVVFEIADALLKKV
LSSPQFQTYSFTSSLLVKLGLLKGEETAKKVCILPGHLLALKHCVEQEYFPVDQASVLEV
FVSRNGKVLASCPNARDDLKATLEKRISA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggagatattgatcagcttacagaggctctggccaagactcatgttggggaa
gagcttagctacaaggggcagggacggaagctgaacgataaacagtcagtggaagagata
gtgcgggagatagaacagttccagggcctgaaggcattgcggcttgagggaaatactgtt
ggcgttgaagcagcacaggccatctccaaggctcttgagtccaaaaaggatctgcagcga
tgctactggagtgatatgtttacgggtcgccttcgctctgaaattccatctgccttgaaa
tcactaggcagtgctctgatgatgtcaggggccaagcttactgaactggacttgagtgac
aatgcgtttggacctgatggcgtaaagggcattgaggccctcctcaagagcactgtgtgt
tacactcttcaggcactcaggctgaataattgtggcatgggcattggaggaggcataatc
ctggcctctgcactgactgaatgctacaaacaatcaagtgctgctggctcacctctaagg
ctaaaagtctttgtagcaggacgtaatcgacttgagaatgacggcgccactgcactttcc
caagcatttcagttgatgggaagccttgaggagattcacatgccacagaatgggattaac
cacccaggcatcacagctttggccactgcagtgcaacacaatcccaatctgcgtgtgctt
aacctcaatgacaatacctttaccaagagaggtgcggtagccatggcccaggccctcagg
caattgtgcaatgtacaggtcattaattttggagactgtctggtgcgctctgaaggtgcc
attgccctaacagcagcactaagaggactgcctggtcttaaggagctgaacctgtcattt
ggagagatttcagaagcggcagctctggttgttgccagggctatacgggacaaagctgat
ctggagaaactagacctcaatggaaactgcctgggggaagatggctgcgaagctctcaaa
gaggccatggaaagcatgggcatgggggatgtgcttggctcgctcagtgatgatgaaggg
gaagaggaggaagatgatgaagaggaagatggtgaagatgaggatacagaggaagaggag
gaaaaggaggaagatgagcagaactgtatcaatgggctaaaagatgaatgtaaaggtgaa
ggtagcccagcaaaggtgtctttatgcagtgctgacttcttgtccttccttcagtcccca
acttcagagaaactgcttaatcttggtgccaagagagttcagctctttcagcaacaagtg
gatttttcagatgctactaaaattgcagacattttccttcagctatcctcagtatataaa
gaagatgcagaagtgaagcaagttgtttttgagattgctgatgccctgttgaagaaggtg
ctttccagccctcagtttcaaacctatagttttacctcttcactgttggtaaaactgggg
cttttaaagggtgaggagacggccaagaaagtatgcatcttgcctggtcacctacttgct
ctgaagcactgtgtcgagcaagaatacttccctgtggatcaggccagtgttctagaggtc
tttgtgtctcgaaatggcaaagttttagcgtcatgtcccaatgctagagatgaccttaaa
gccacactggagaaaaggatctctgcctag
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