KEGG   Pangasianodon hypophthalmus (striped catfish): 113527111
Entry
113527111         CDS       T05759                                 
Symbol
bicc1
Name
(RefSeq) protein bicaudal C homolog 1
  KO
K18756  protein bicaudal C
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113527111 (bicc1)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113527111 (bicc1)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_2 KH_N4BP1_1st SAM_Ribosomal_mS41 SpoIIIAH
Other DBs
NCBI-GeneID: 113527111
NCBI-ProteinID: XP_026770432
LinkDB
Position
Unknown
AA seq 973 aa
MAARRSSVSGLMQQPEAPSSSDSPPPHGSDDEEQHGGAAAPHDPEWTEERFRVDRKKLEL
MLLAAAEGRVNGGEDFFQKVMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKRDDVKEAKE
KIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKS
NQVSIAGQPGGVEAARARIRELLPLVLMFELPVIVQLNPDPSSPAIQHISQTYNISVAFK
QRSRLYGATGVVRGSQNNIAAVKRGTAMLLEHLAGSLASAITVSTQLDIAPQHHLAMMGR
NGSNIKHIMQRTGAQVHFPDPNCPQKKSTVYIQGTIDSVCLARQYLMGCLPLVLMFDIKE
DVAVDPQCVTSLMEQLDVFISVKPKPKQPSKSVIVKSVERNALNMYEARRYLLGLDSSGV
CVSVSTSSSSSSSSSSPPSALTPTLSCPVGIDILTSAGLGLTSLGLLGPTAASLSAPSTP
NSLLNALNSSISPLHVPSSGTPSPTLWSNSLASPTSTPGFSSPLMIHPATQATLTNILLQ
SYTQNTPSPPPGLAPIDPQVNGVTDCSKAVSSLNGKHSSSMYNRMSTSSLADKVLNAAHG
DPVQDASTHCPSEPLSSKSSQDQGSDTFVEVGMPRSPSHSGNSSELKQMLASCKTASGKR
QAVELLQGTKNSHLHSDCLLSDSDSSASESPVADKRAPGSERAAERAAQQNSERIRLPPQ
SSFSNMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANH
VSYKPTMSTTYEGSPLSLSRSNSREGVGSGSDSDNWRERNGSGLPSHSDFPTPISPKRKQ
NKSVEHYLSSSNYMDCISSVTGSNGCNLSTSLKGSDLPELFSKLGLGKYTDVFQQQEIDL
QTFLTLTDQDLKELGITTFGARRKMLLAISDLNKNRRKLFEPPNIRSSFLEGGASGRLPR
QYHADIASVSGRW
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggccgctcggcgcagctcggtcagcgggctcatgcagcagcccgaggcgccgagctcc
agcgactccccgccgccgcacggctccgacgacgaggagcagcacggcggagcggcggcg
ccccacgaccccgagtggactgaggagaggttccgggtcgaccgcaagaagctcgagctc
atgctcttagctgccgctgaggggagggtgaacggaggcgaggatttctttcagaaggtc
atggaggagaccaatactcagattgcatggccttcaaagttgaaaataggtgccaagtct
aagaaggatccacatatcaaagtaagtgggaagagggacgacgtgaaagaagctaaggag
aagatcatgtctgtcctcgatactaagagcaatcgcgtgactctgaaaatggacgtttca
cacactgagcactcacacgtcattggcaaaggaggcaacaacatcaagaaggtgatggag
gatacaggctgccacatccatttccctgactccaaccgcaacaaccaggcagagaagagc
aaccaggtgtctattgcaggccagccaggaggagtggaggcagctcgggccaggatcagg
gagctgctgcctctggtgttaatgttcgagctgccggtcatagtacagctgaaccctgac
cccagctctccagccatccagcacatctctcagacatacaacatctctgtcgccttcaag
caacgttctaggctctacggtgctactggggttgtgaggggctcccagaacaacattgca
gctgtgaagaggggcacggccatgttgctggagcacttagctgggagcctggcaagcgcc
attaccgtgagcacacagctcgacatcgcgccccagcaccaccttgccatgatgggccgc
aatggcagcaacatcaaacacatcatgcagagaactggcgctcaagtgcactttcctgat
ccaaactgcccgcaaaaaaaatcgaccgtctatatccagggcaccatcgactctgtttgc
ctggcacgccagtacctcatgggctgcctgccgctggtgctgatgtttgatatcaaagag
gatgttgcagtagatccacagtgtgtcacatctctcatggaacagctggatgtgttcatc
agtgtcaaacccaaacccaaacagcctagcaagtcagtgatagtgaagagtgtggagagg
aacgctctgaacatgtatgaagcccggcgctatctgctgggcctggacagcagtggagtg
tgtgtatccgtctccacctcctccagcagtagtagcagcagcagcagccctccgtccgct
ctgaccccgactctcagctgccctgtgggcatcgacatcctcacctctgccggcttgggt
ctcaccagcctgggtctgcttggtcctacagcagcttctctaagtgctccgtccaccccc
aactctctccttaatgcgcttaacagctccatcagtccactgcatgtcccctcctctgga
acacctagtcctacactttggtccaactcactggccagtccaaccagcacaccaggtttt
tcatcaccactgatgatccatccagccactcaggccacactgaccaacatcctgctccag
agttacacacagaatacaccgtctcctccacccggccttgccccaatagatccacaggtc
aatggagtcacagactgcagcaaggccgtgtcctccctcaatggcaagcactccagctct
atgtacaacagaatgtccacttcctcactggctgataaagttctgaatgcagcacatgga
gatcctgtccaggacgccagtacacactgtccatctgaaccactgtccagcaagtccagt
caggaccaaggatctgatacttttgtggaggtgggcatgccgcggagcccctcacactcg
ggcaacagcagtgaactaaagcagatgttggcctcctgtaaaacagcctcaggcaagagg
caggctgtggagttacttcagggcacaaagaactctcatttacattcagactgtttgctt
tccgactcggactccagtgcttctgagagtcccgtggcagataaacgggctccgggcagt
gagagagcagccgaacgagccgcccagcagaactcggagcgcatccgtctcccaccgcag
tcctctttctccaacatgcaggcctttgattatgagcagaagaagttgctggcaaccaaa
gccatgctgaagaagccagtagtgacggaggtgcgaacgccaacaaacacatggagcggc
ctgggtttctccaagtccatgcctgcggaaaccattaaggagctgcgcagggccaaccat
gtgtcctacaagcctaccatgtccactacctacgagggatctccgctatcgctgtcacgc
tccaacagcagagaaggagtaggaagtggcagcgactcggacaactggagggagaggaac
gggagcgggctcccgtcacacagtgatttcccaacacctatcagtcccaagaggaagcag
aacaagtcagtggaacactatttgagcagcagcaactacatggactgcatctcctcggtg
accgggagtaacggctgtaacctcagcacctctctgaaaggctccgatctgccagagctc
ttcagcaagctgggcctagggaaatacaccgacgtcttccagcaacaggagatcgacctg
cagacgttcctcactctgaccgatcaggacctgaaggagctgggcatcaccacatttgga
gcacgccggaaaatgctgctggccatctcagatctgaacaagaaccgaaggaaactcttt
gagccgccaaacatccggtcctcgttcctggaggggggcgccagcgggcgtctgccacgc
cagtaccatgccgacattgccagtgtgagtgggcgctggtga

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