KEGG   Pangasianodon hypophthalmus (striped catfish): 113527252
Entry
113527252         CDS       T05759                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06493  integrin beta 3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03266  Virion - Herpesvirus
phyp04081  Hormone signaling
phyp04145  Phagosome
phyp04148  Efferocytosis
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
phyp04810  Regulation of actin cytoskeleton
phyp04820  Cytoskeleton in muscle cells
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    113527252
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    113527252
   04512 ECM-receptor interaction
    113527252
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113527252
   04148 Efferocytosis
    113527252
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113527252
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113527252
   04810 Regulation of actin cytoskeleton
    113527252
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113527252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113527252
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113527252
   04515 Cell adhesion molecules [BR:phyp04515]
    113527252
   04090 CD molecules [BR:phyp04090]
    113527252
Membrane trafficking [BR:phyp04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    113527252
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113527252
Cell adhesion molecules [BR:phyp04515]
 Integrins
  Integrin beta subunits
   113527252
CD molecules [BR:phyp04090]
 Proteins
  113527252
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_integrin EGF_2 EGF_TEN EGF_Teneurin
Other DBs
NCBI-GeneID: 113527252
NCBI-ProteinID: XP_026770671
LinkDB
Position
Unknown
AA seq 793 aa
MAKTPTFLASHSRIYYLLLLYLISDQVFGSNICTSRGASTCQQCLAVHHSCAWCFQEDFG
LNGPGASRCDLKENLIEAGCKAEELEYPISMMTVTEDKPLSDKASGSTTDVTQIQPQKLH
ITLRPDDSRTFTLQVRQVADYPVDLYYLMDLSYSMNDDLTQLRKLGNGLAEEMSKTTSNL
RMGFGAFVDKPLSPYMYISPPEAVKNPCYSIPYKCQPQFGYRHVLSLTDEVSRFTEEVKK
QKVSRNRDAPEGGFDAIIQAAVCKEKIGWRPGASHLLVFTTDAKTHVALDGRLAGIVQPN
DGQCHMGPDNVYNMSTTMDYPSLALITEKMSENNINLIFAVTRPVLPLYKNYSDLIPGTV
VGTLSQDSHNVIQLIQDAYAKLRSKVELELLNVPEELSLSFNATCLNDEFIPGLKSCSGL
KRGDQVSFSVEVRARGCPKEKTKTFTIKPVGFKDTLQITVDFECECKCQAQGQPNSPICH
QGNGTYECGICLCHAGRLGPRCECAEGDYSLSEQDTCSGPNKVICSGRGDCVCGQCVCHN
NDFGKVWGKRCECDDFSCLRYKGELCSGHGTCSCGFCQCYPDWSGENCNCSTRTDTCMSS
LGLLCSGRGQCVCGSCECTQPGAYGSTCDKCPTCPDACTMKKDCVECKHFQRGRLFDDDS
CARICRDEIRLVDDLVLHDKNAVNCTYKDEDDCVQRFQYYEDNSGKSILSVVKEPDCPKG
PDILVVLLFVAGAILILGLVSLLIWKLLVTIHDRREFAKFEEERARAKWETGHNPLYKGA
TSTFMNITYRGKE
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggccaaaacgccgacgttcctcgcgtcacattcacggatttattatctccttttactg
tatttgatttcagaccaagtgtttggctctaatatctgcacctctcgtggagctagcaca
tgtcagcagtgtttggcagtgcaccattcctgtgcctggtgcttccaagaggattttggg
ttaaatgggccaggagcatcacgctgtgacttaaaggagaacctgatagaagcgggatgc
aaagcagaagaactggagtaccccatcagcatgatgactgttactgaggacaaacctctt
agtgacaaggcctcggggtccaccactgatgtcacgcagatccaaccacagaaactgcac
atcactctaagacctgatgactcgcggacattcacgctgcaggtgaggcaggtcgcagac
taccctgtggatctgtactatctgatggacttgtcctactccatgaatgatgacctgaca
cagctgaggaagctgggaaatggactggcagaggagatgagcaaaaccaccagtaacctg
cgtatgggcttcggggctttcgtggacaaacctttatcaccgtatatgtacatctcccca
ccagaagctgtgaagaacccatgctactcgataccatacaaatgccagccgcagtttggc
tacagacatgtcctgtctctgacggatgaagtgagccgcttcacagaggaagtaaagaaa
cagaaagtatctcggaacagagatgcccctgaaggaggctttgatgccatcatccaggca
gccgtatgcaaggagaagatcggttggcgcccgggtgcttctcacctgcttgtgtttacc
acagatgccaagactcacgtagcgctggatggacgcttggctggcatcgtgcagcctaat
gacggccagtgtcacatgggtccagataatgtatacaacatgtccactacaatggactac
ccatctctggcactgatcacagagaaaatgtcagagaacaacataaatctcatatttgct
gtgaccagacctgtactgccactttacaagaattacagtgatctgatacccggtaccgtg
gtggggactctgtctcaggactcacacaatgtgatccagctgatccaagatgcctacgct
aaacttcgatctaaggttgagcttgagctcctgaacgtgcccgaagaattgagcttgtcc
ttcaatgccacatgtttaaatgacgagttcatccctggactcaagtcttgctctgggctc
aagagaggagaccaggtatctttcagtgttgaggtacgtgccaggggctgcccaaaggag
aagaccaaaactttcaccatcaaacccgtgggcttcaaagacacactccagatcaccgtt
gacttcgagtgtgagtgcaagtgccaggctcaggggcagcccaacagccctatctgtcac
caaggcaatggcacctacgagtgtggcatctgcctgtgccatgcaggacgactgggtccg
aggtgtgagtgcgctgagggtgattacagcctgagtgagcaggacacatgcagcggccct
aacaaagtgatctgcagtgggcgaggggactgtgtatgcggtcagtgcgtgtgtcacaac
aacgactttggaaaggtctgggggaagaggtgcgagtgtgacgacttcagctgcctgcgt
tataaaggagagctgtgctcaggacatggcacatgctcgtgtggtttctgccagtgttac
ccggactggtcaggggaaaactgtaactgctcaacccgcacagatacctgcatgtccagc
ctggggttgctgtgcagcggccgtggtcagtgtgtgtgtggaagctgtgagtgtactcag
cccggggcctatggctccacctgtgacaagtgtcccacctgccctgacgcctgcactatg
aaaaaggattgtgtggagtgtaagcattttcagagaggcaggctcttcgacgatgacagc
tgtgcccgaatttgcagagacgagattaggctggttgatgatctggttttgcatgataag
aacgctgtgaactgcacttacaaggacgaggacgattgtgtccagaggtttcagtactat
gaggacaacagcgggaagtccattctgtctgtggtaaaagagccagactgccctaaaggc
cccgacatcctggtcgttctcctcttcgttgctggagctatactaatcctgggtctcgtc
tccttgctcatctggaagctgctggtgacgattcacgaccgccgcgagtttgccaagttc
gaggaggagcgagcacgagccaagtgggaaacgggccacaatcctctctacaagggtgct
acttctactttcatgaacattacctatcgaggaaaggagtga

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