Pangasianodon hypophthalmus (striped catfish): 113527255
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Entry
113527255 CDS
T05759
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113527255 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113527255 (fancc)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
113527255 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
113527255
NCBI-ProteinID:
XP_026770677
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MAPLSELQMRFWMDKAVQWGQATSPSAQQDISKHVQSLGTFLQQLVHVLQTTSSTTEAMK
SFPFVGQFLGRLCWNPYVTADAASRRLLLQCVWLLYSVEPQNAVEHRANEWIRNLLCHLT
SEDEGSMLHALEKHAGFPPQQYYSGSLKKMVALLTTEVNISHITSAASLGRCMFDSIHSL
SVACVPLVTCPEVAPLIGALLKHYNLCSCSHLSEEFIKAVNTAWLSKKLVMEDGAVMALW
CYSLSSLEQAVLLLLERVLSNPKLMPNLETVVTDSLLPKASALHCHIFLIVNDVFRNAII
TLEENLAVRSLLQVFTSCFLQTRAAQRPQERLPLRSFFPHVPHNLLTPLLTAPSDVPKHV
WLEHLSWIGTLLEKFLQERNQEEDSRRGHRAMFEVWFLLVQCGHWIDVAAELLVSVGPEQ
SELLLFLLMFYHHPTNRGHQSTQHNMVARQAWSDLRSLFLTHTLSPERLSAVNELLCTLS
ANLVLRLLLNFAIFSQASPSRVTDVIQKVLTGAGVKRSAMCMLFSMHQRLKGDSAVDARL
RMLEDRLHAT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctccactctctgagctccagatgaggttctggatggataaagcagtgcagtggggc
caggctacatctccctctgcacagcaggatataagcaaacacgtgcagtctttggggacc
ttcctccagcagcttgtacacgtgctacagacaacgagctctaccactgaggccatgaag
agctttccttttgtgggccagttcctgggaagactttgttggaacccatatgttactgcg
gatgcagcaagcaggaggctcctgctgcagtgcgtgtggcttctatatagtgtggagcct
cagaatgcagtggagcaccgggccaacgagtggatacggaatttgctgtgccatctaact
tcagaagatgagggcagtatgctgcatgctctggagaaacatgccggcttcccacctcag
cagtattattcagggagtcttaaaaagatggtggcattactgacgacggaagttaatatt
agtcatatcacttcagcagcctctttaggaaggtgcatgtttgacagcatccattcttta
tcagtagcttgtgtccccttggtcacatgtcctgaggtggcacctcttattggtgcactg
ctaaagcattacaatttgtgtagctgttctcatctcagtgaagagttcataaaagcagtt
aacacagcctggctcagtaagaagctggtgatggaggatggagctgtgatggctctgtgg
tgttatagcctgtccagcttggagcaggcagttctgcttctgcttgagcgtgttctttct
aacccgaaattgatgccgaatctggagacagtcgtcactgactctttactgcccaaagca
tcagcactgcactgccacatctttctcatagtgaatgatgttttcagaaatgctataata
acactagaagaaaatcttgcagtgagaagtctattacaagttttcactagctgttttctt
cagactcgtgctgcccagaggccacaggaaagactaccactaagatccttttttcctcat
gtacctcacaacctgctcacacctttattgacagcaccatcagatgtgccaaagcatgtg
tggctagagcacctaagctggattgggacattactagagaaattccttcaagagagaaac
caggaggaggacagcagaagggggcacagggccatgttcgaggtctggttcttgcttgtc
cagtgtggtcattggatagatgtagctgctgagctgctggtctcagtaggacctgagcaa
tcagagcttcttctcttcctcttgatgttctaccaccatcccaccaacagagggcaccag
agcactcagcacaatatggtggcaagacaggcatggagtgatttgaggagcctcttcctc
acccacactctgtctcctgaacgactatctgctgtgaacgagctgctctgcactctgtca
gcgaacctcgttctcagacttctgcttaactttgccatattttctcaagcatcacccagc
agggtgacagatgttatacagaaggtgctgactggtgctggtgtgaagcgcagcgccatg
tgtatgctcttctctatgcatcagagactaaaaggagacagtgcagtggatgccaggctc
aggatgcttgaggacagactccacgcaacatag
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