Pangasianodon hypophthalmus (striped catfish): 113527264
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Entry
113527264 CDS
T05759
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113527264 (trim65)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113527264 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-B_box
Prok-RING_4
LAMB1
zf-RING_11
U-box
Prefoldin
CREPT
BORCS6
Motif
Other DBs
NCBI-GeneID:
113527264
NCBI-ProteinID:
XP_026770689
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MEEHSLTCTICLERFKYPVTIPCGHTFCKDCISKHWDQMERGGPQNTFNCPICKETFSPR
PTLNRNVSLSVLSEVAANSSAERAAGAACRIDRVEDGSEELCPRHQKPLIYYCRSDCMCV
CCVCSVKECKDHDKVLVEEERSNREEGLKKKGMEIGKCIEDTEKNILMLSENITEAKVSL
QQTSQWVSAKFSQLLKVLMEKQEVTQSFVEQQQASTVSQAETRLSNLQEKLKQLRELQEQ
ISSLSALPDCQLIQDSRLVEVPQMGSVPVDVSVNLQEKLNPVTDVLSRISKLVCEDLDKA
VYAAVSHHKEEYVHSLVTDRCSLTFDPRTANAHLMLSQNNQRAEHLISGPHPVPADEARF
DHTWQVLCFENFTHGRHYWELEVSKPWAYVGVTYPGIPRKEKGRTSMLGMNELSWSLQLN
ERQLTAWHGSHGEPVTGELQLNKRPLRIGMLLDYDEGTLAYYGENQVRLHAFHCVFSHEL
YPACWIGEGVSVTLCPM
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcacagtctgacctgcaccatctgtttggagcgtttcaaatacccagtgact
atcccttgtggccacaccttctgcaaggattgcatatccaaacactgggatcagatggag
cgaggtggacctcagaatacattcaactgcccaatatgcaaagagacgttctccccaaga
cccaccctgaatcggaacgtttctctgtccgtcttgagcgaagtggccgccaacagctca
gcagagagggctgcaggtgcggcgtgtagaatagaccgagtcgaagacggctctgaggag
ctctgtcctcggcatcaaaagcctcttatctactactgcaggagcgattgtatgtgtgtg
tgctgtgtgtgctctgtgaaagagtgcaaagatcatgacaaggtgctggtggaagaggaa
aggagtaacagagaagagggactgaagaagaagggcatggagattggaaaatgcatagag
gatacagagaagaacattctgatgctctcagaaaatatcactgaagctaaggtgtcactg
cagcagacgtctcagtgggtgagcgccaagttctcacagctgctgaaggtgctgatggag
aaacaggaagtgacgcagagtttcgtggagcagcagcaggccagcactgtatctcaggct
gagactcggctcagcaacctgcaggagaaacttaagcagctcagagagctacaggagcag
atcagcagcctcagtgccctccccgactgccagctcattcaggactccaggctggtggag
gtccctcagatgggttcagttcctgtagatgtcagtgtaaaccttcaggagaagctcaat
cccgtcacagacgttctgtctcgcatctcaaagctggtgtgtgaggatctggataaagct
gtgtatgcagctgtgagccaccacaaagaagaatatgtacattctctcgtcacagaccgt
tgttcattgacctttgaccctcgcacagccaacgctcacctcatgctttctcagaacaac
cagcgggcggagcacctgatctcagggcctcatccagtgccagctgacgaggcacgcttt
gaccacacctggcaagtgttgtgctttgagaatttcacacacggtcgccactactgggag
ctggaggtgtccaaaccgtgggcgtatgtaggtgtgacgtaccccggcatcccgcgcaag
gagaaaggcaggacgtccatgctgggaatgaatgagctgtcatggagcctgcagctgaat
gagcgccagctcaccgcttggcacggtagccatggagagcctgtaacaggcgagctgcag
ttaaacaaacggcctctgcgcattggcatgctgctggactatgacgaaggcactctggct
tattatggggagaaccaggtgaggctgcacgccttccactgcgtcttttcccatgagctc
tatcctgcctgctggatcggggagggggtcagtgtcactctctgcccaatgtga
DBGET
integrated database retrieval system
