Pangasianodon hypophthalmus (striped catfish): 113527301
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Entry
113527301 CDS
T05759
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113527301 (zeb1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
113527301 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
Homeodomain
zf-C2H2_6
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
113527301
NCBI-ProteinID:
XP_026770742
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MADGPRCKRRKQANPKRTSVSNYSHVLEGQSDSDDEDKLHIVEEDGTPVDGADGDSVAHD
DDANGPEDRWDEVKEECVSEEDERSRDALVEEMLQQGDTAVIFPEAPEDEPRQGTPETSG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFSHRTQLD
RHMSAHKAGRDQRHVTQTGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCK
KRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGGTKTPQCPSPSLPSSPATARTQIQD
KLDHSKPLQEQLPITQIKSEPLDYEYKPVVVAPAAPGGVNGVFQGGAAAPLQGAVQAVVL
PTVGLVSPISINLGDLQNMLKVAVDGNVIRQVLENAQTKGQPASTGRVAIAQAPQQVIQA
ISLPIVDQDGTAKIIINYSLDPSQTQVALQNLKKEPVGQNTDSCKAERLPEDLTVKSKTT
RDKTTITVDEEWQQEKGKLYNHTTNKHCGKEEQEVNGTHLEEKPEADVELCPGQPPLKNL
MSLLKAYFALNAEPTKEELAKISESVNLPTDIVRKWFEKMQNGQIPMEVSTATPQTNGID
INGTPEETPNPMSEQDSKRNQEEEEEMELHSPAEGTTAGISGTENGPTSPLPLNLSADGP
VPAQTAEEGEGPLDLSLPKSVAATNTTSAHSVYSAQDEPLNLVCTKKEVLSNASTSTAIY
ASQTSANSLNIVTTQLPTLVAIAKQGPGQCLRTLTTTKQTILIPQLAYTYTTTASSPAGG
DTPQKAILHVNGVKEEKQEAGSEVASVLEEQTDSDSGPVRKKMKKTENGLYACDLCDKIF
QKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSHSG
SYSQHMNHRYSYCKKEAHGQNQVQRDEEEENPNEEQPGAASTAASPPSQVDSDERGSSAR
EDEESEEEDAMGSGSVVDEDEIQVVRIGEEGGDDEEDTGEQYRMEEMDTGNEEAVRENGG
HEEGTVESQEEGEEDGEMMKVVVMQDDEEDEEQTENTEVMDMQENTGEKKNENEGENVKE
EGGNEGNTPSENGDVK
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccaaagaggacgagcgtg
agtaactacagccatgtactggaaggccagtcagactctgatgatgaagataagctccat
atcgtggaggaagacgggacccccgtggatggagctgatggtgacagcgttgcccacgac
gatgatgccaatggccctgaggaccgatgggatgaagtgaaagaggagtgtgtgtcagag
gaggatgagaggagtagggatgctcttgttgaggaaatgcttcagcagggagacacggcc
gtcatcttcccggaggcaccggaagacgaaccacgccagggaacaccggagaccagtggc
catgatgagaatggcacaccagacgcgttttctcagctcctcacctgtccctactgctct
cgcggctacaagcgctacacgtctctgaaggagcacataaagtatagacacgagaagagc
gaggacaacttcagctgctcactttgcagctacactttctcccaccgcacacagctcgac
cgacacatgagcgcacacaaagcaggcagagaccagcggcatgtaacccaaacagggggt
ggaggaaaccgtaagtttaagtgcactgaatgtggcaaagccttcaagtacaaacaccac
ctgaaagaacacctgcgtatccacagtggggagaagccatacgagtgccccaactgtaaa
aagcgtttctctcactctggctcctacagttcccatatcagcagtaagaaatgcatcggc
ctcatttccgtcaacggccggccacgaccctcgccagccacaggaggcaccaaaacccct
cagtgtccttcaccatccctgccctcctcccccgccactgcccggactcagatccaggac
aaactggaccatagtaaacccctgcaggagcagctcccgatcacacagattaagtctgag
ccattggactatgagtacaagcctgtggtagttgccccggctgcccctggaggagtaaac
ggggttttccaaggaggggcagcagcaccactacagggggcagtgcaggctgtggtcctc
cccactgtaggactggtctccccaatcagcattaatctaggggatttgcagaacatgcta
aaggtggcagtggatgggaatgtgatcaggcaggtgttggagaatgcccagaccaaaggc
cagcctgcaagcaccggcagagtggctattgcacaggctcctcagcaagtcatccaagcc
atcagtcttcccattgttgaccaggacggtaccgccaagatcataatcaactatagcctt
gacccatcgcagactcaggtagctctgcagaacttgaagaaagagccagtggggcagaat
acagactcctgcaaggctgaacgactacctgaggacctgacggttaaaagcaagacaacc
agggacaaaaccaccatcactgtggatgaagaatggcagcaggagaagggcaaactctac
aatcacacgacaaacaaacactgtggcaaggaggaacaggaggttaacggaacacacttg
gaggaaaagcctgaagcagatgttgaactgtgtcctgggcagcccccactgaagaacctt
atgtccttgcttaaggcttactttgccttaaacgcagaacctaccaaggaggagctggca
aagatatccgagtcagtcaatctccctactgatattgtcaggaagtggtttgagaagatg
cagaatgggcagattccaatggaggtctctacagccacaccccagactaacgggatagac
attaatggcactccggaggaaacccccaatccgatgtcagagcaggacagcaaaaggaac
caagaggaggaggaggagatggagcttcatagcccagcagaaggcactacagctgggata
agtggaacagaaaatggccccacatcccctttaccactaaatctatctgcagatgggcct
gtgccagcccagactgcggaggaaggagagggaccgcttgatttgtctctcccaaaatct
gtagcggcaacaaatacaaccagcgctcactctgtttactcagctcaggacgagcctctg
aacttggtttgcacaaagaaggaagtgctcagcaatgcaagcaccagcactgccatctat
gccagccaaacaagtgccaattccctgaacattgtgaccactcaactgcccaccctcgtg
gctatcgccaagcaaggccccgggcagtgcctgcgcaccctcaccaccactaaacagacc
atcttaatcccacagctggcctacacctacaccactacagcctccagcccagcagggggt
gacacaccacagaaggccatactgcatgtcaatggcgtcaaggaggagaagcaggaggcc
ggttcagaggtggcttcagtgctggaggagcagacagactcagactctgggccggtgagg
aagaagatgaagaagactgaaaatggcttgtatgcctgtgacctgtgtgacaaaatcttc
cagaagagcagctcgctgcttcggcataaatatgaacacacaggtaaacgtcctcacgaa
tgcgggatctgcagcaaagctttcaaacacaagcaccacctgatcgagcacctgcgtctg
cactcgggagaaaagccgtaccagtgtgacaagtgcggcaagcgcttctctcactccggc
tcctactcgcagcacatgaaccaccgctactcatactgtaagaaggaggcacacggccag
aaccaggtgcagagggacgaagaggaggagaaccccaacgaagagcagcctggagcagca
agcaccgccgcctcgcccccatctcaggtggactcggatgaacgagggagcagcgccagg
gaggacgaggagagcgaggaggaagacgcgatgggctcggggagcgtggtggacgaggac
gaaattcaggtggtcaggatcggtgaggaaggaggagacgatgaggaagacaccggagag
cagtacaggatggaggagatggacacaggaaatgaggaggcggttagggagaatggagga
catgaggagggtacagtggaaagtcaagaagagggagaagaagatggagagatgatgaag
gtcgtggtgatgcaggatgatgaggaagatgaagagcagacagaaaacacagaagtgatg
gacatgcaggaaaacacaggagagaaaaaaaacgagaatgaaggagaaaatgtgaaggag
gagggtggaaatgaaggaaacacacccagtgaaaatggagatgtgaaatga
DBGET
integrated database retrieval system
