Pangasianodon hypophthalmus (striped catfish): 113527306
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Entry
113527306 CDS
T05759
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113527306
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113527306
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113527306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
113527306
NCBI-ProteinID:
XP_026770766
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MAQSSSGVSDGESVDMNDTTSLKSLEEVDEDFGFGDDLELNQFDGLPYSSRYYKLLKERH
QLPIWASRQEFMSVLEANQLVIISGTTKTGKSTQVPQWCAEFCLSARYQHGVVVCSQIQR
QQAVDLALRVADEMDVNIGHEVGYSIPLENCCSTDTVLRYCTDDVLLRELMSDPLLEHYG
VVVIDQAHERTVSTDLLMALLREVLLQRAELRVVLLSVTPASHTLLTHFSDAAHLHVEAP
CSPEVLHSSRGSTESFCAALRLVLEVHRTKEPGDIAVFLASEQDVDCACSLLAKEASRLS
SNLGELVPVAVCPGHAGICPPVTQHQKKGRKVFLSCSQSEDMFWSVDTVNFVIDTGVEKR
FVYNPRLRASSEVIRPISRCRAEIRKQLAGSAGKCFCLYPEETELCTEIPARILEANITS
AVLFLKRMEVAGIGRCDFISRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLDP
QMAKALLASCEFDCASEVLTIAAMLAAPSCFLEPPVGMETEAMLCHVKLYHPEGDHFTLI
NIYNTYKRSQREPYFTQEKWCQDYFLCCAALQTADAIRAELTDILKRLELPISEPAFGTK
TNTLNVKRALLAGFFMQIARDVDGSGNYFMLSNKHVAQLHRLSAYGVKAHKLGLPEWVLF
HEFTLSNSNCIRTVTQISPKVFIQVAPQYFFYNLPPSECKELLQHILDTKETGSKKSKQK
THPVIKETPKGQESQSYDRCVIQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagcagcagcggtgtttccgacggagaaagtgtggacatgaatgacacgact
tctctgaagagtttagaagaggtggatgaggatttcgggtttggagatgatctggagctg
aaccagtttgatggtcttccctactcctcgcggtattataaactgctgaaggagagacac
cagctccccatctgggcatcgagacaggagtttatgagtgttttagaagccaatcagctc
gtcatcatctcgggtacaacaaaaactggcaaaagtacacaggttccacagtggtgtgca
gagttctgtctgtcagcgcggtaccagcatggtgtcgtggtgtgtagtcagatccagaga
cagcaggctgtcgatttggccctgcgtgtagctgatgagatggatgtcaatatcggccat
gaggtgggctacagcattccactggagaactgctgctccactgacactgttctcaggtac
tgcaccgatgacgtgctgctgagggagctgatgtccgacccattactggagcattatggt
gtggttgtgatcgatcaggcccatgagcgcaccgtgagcacagacctcctaatggctctg
cttcgggaggtgctcctgcagcgtgcagagcttcgggtggtcctgctatccgtcacgcca
gcctcgcacacactcctcacacacttcagcgatgcagctcacctgcatgtggaggcacca
tgctcgcctgaagttctccacagcagccgaggcagtacggagagcttctgtgcagctctg
agactcgtcctggaggtgcacaggaccaaagagcccggggacatagctgtgttcctcgcc
tcagagcaggatgtggactgtgcctgtagtcttctggctaaagaagcatccaggttgagc
agtaatctcggagagctggtgccagtggcagtgtgcccaggccacgctgggatctgccca
ccagtcacacagcaccaaaagaaaggcaggaaggtctttctgtcctgcagtcagtcagaa
gacatgttttggtcagtggacacggtcaattttgtaattgacactggtgtcgagaagaga
tttgtgtataacccacggttgagagccagctctgaggtgatcagacccatcagtagatgt
cgggcagagatccgtaaacagctggctggatcagcagggaagtgtttctgcctgtaccct
gaggagacagagctctgtactgagattcctgctcggatcctagaagcaaacatcacctcg
gctgtgctcttcctcaagaggatggaggtggctggaatcggacgctgtgacttcatcagc
aggccagatcctgaaggcttaatgcaagctttagaagagctggattatcttgcagctttg
gatgatgatggaaacctttccgagatcgggatcataatgtctgagttccccttagaccct
cagatggctaaagctctgttagcgtcgtgcgagtttgattgtgccagtgaagtgttaacc
attgcagccatgttagcagctccaagctgcttcctagagccccctgttggcatggaaaca
gaagcgatgctgtgtcacgtgaagttgtatcatccagagggagaccacttcactctgatc
aacatctacaacacttacaaacgcagtcagcgagagccatatttcacacaggagaagtgg
tgtcaggattactttctgtgctgcgcagctctgcagactgcagacgccataagggccgag
ctgactgacatactgaagagactggagctcccgatctccgagccagccttcggcaccaaa
acaaacacgctcaatgtcaagcgagcactactggctgggttcttcatgcagattgctcgt
gatgtggacggctctggaaactatttcatgctgagcaataagcatgtggcacagcttcac
cgtctttcagcttatggggtcaaagcgcacaaacttggcctgcctgagtgggtgctgttt
cacgagttcacactctccaacagcaactgcatccgtacagtcacacaaatctcacccaaa
gtgttcatccaagtggcaccgcagtatttcttctacaacctgccgcctagtgagtgtaag
gagctcctgcagcatattttggacaccaaggagactgggagtaaaaagagcaaacagaaa
acgcatcctgttattaaagagacaccaaaaggacaggagtcccagtcttatgacagatgt
gtgatacagtaa
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