Pangasianodon hypophthalmus (striped catfish): 113527309
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Entry
113527309 CDS
T05759
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145
Phagosome
phyp04514
Cell adhesion molecule (CAM) interaction
phyp04517
IgSF CAM signaling
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113527309
04517 IgSF CAM signaling
113527309
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113527309
09142 Cell motility
04810 Regulation of actin cytoskeleton
113527309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113527309
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113527309
04515 Cell adhesion molecules [BR:
phyp04515
]
113527309
04090 CD molecules [BR:
phyp04090
]
113527309
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113527309
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113527309
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113527309
Cell adhesion molecules [BR:
phyp04515
]
Integrins
Integrin alpha subunits
113527309
CD molecules [BR:
phyp04090
]
Proteins
113527309
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
113527309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
VWA_2
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
vWA-TerF-like
Copine
Motif
Other DBs
NCBI-GeneID:
113527309
NCBI-ProteinID:
XP_026770771
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MTALKMDWNFAVCFFLISVPQSVVTFNIDPNSWKAFTQIENTAFGYKVISQKTSSLIVSD
PLIQSRNERGKVYSCAVAQEKCSPVPINVPSEAVNMSLGFSMTKDPQSSKLVVCGPTIPK
NCKHFTAYNGMCFILDSNNNPSAPIPSTLRDCPPPSQTDIAFLLDGSGSVSTGDFTIMKN
FVISMVNGLKDRDFQFAVAQYSFECEIHIKFNSFSSTDQIRWINQFSGGTNTAKAIKKVV
SELFTRQAGARENANRVLVVITDGESHDRSELGTAAREAEQKKITRYAIGVGRAFNRQAA
ANELKTIASDPDDKHVFKVNDFSVLKEIQDTLEENIIAIEGTQTSGESTRMEFAQDGFSA
DFVSYDNIIMSAVGAFQWKGGYQRYNYRGTPLDSFQKGDSNDSYLGYSMTVAKTSRELYY
IIQGAPRDKHMGKVTISGNGVFQTLDSPEPQIGAYYGAELCVVDLDLNSVADLLLVSAPL
HNEGDQEGKVFIYTFTTSLSQRRVNLNVKHIQSVKGIPGQRGRFGLTLASPADLNRDGLV
DVVIGAPLEEKGEGSIYIFNGRKEDITPTFSQRITGSSVRTGLQFFGFSLSQSALDHSGD
QLPDLAVGSKGAVILLRSRPIVKLWNKVTYNPSKIPTRDTDCSSPLKNTLKLCFSIIGSN
TGMTDLTANVNYTLTLDAKRQSYRAYFSPKNRVRFGMISVSMQEKCNQHEFFIESCPNDA
LNPLSNELVYTFEGLPIVRQNNLRPMLLPTTKTTLDTNLDFEINCGIDNICIDNLKVDFN
FSGYSVIQVGIMQDMNVTVFVENRGENSYNSRVILKYPFGLSFRRVTTKQGRLECVSLDS
DEKAALGETTCFISKPIFKNNGLATFDVTYSINKESNFDRTVTFTANAFSDNDRHSPDNE
LFRRKTIDVKYAIYIALIRHENSTIHINFTAGKNDLEKPVHQIFKVENDLRDLNVNIFIR
VPIKLGVKDIWTNNNLQIQGCNAERVEQPTIPDFVAALQKQPEVNCSVAVCRVFKCAANL
IRKQMKFYVISGNVSSGWIEQTGLRSAVFELVSTATLDYNKTAYIFFSFDSINTAPVGKI
NTQVEVYEEKLPLKETIGGVVGGLVLLALITAGLYKAGFFKSNYKKMLEEAGAGAEGPRG
DAEALSQE
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattgaaaatggactggaattttgcagtgtgctttttcctgatttctgtacct
cagtcagtggtgactttcaacattgatccaaattcatggaaagcgttcacccaaatcgaa
aacacagccttcggctacaaagtgataagccagaaaacctcgagtttgattgtgagtgat
cccttaatccaaagtaggaatgaaagaggcaaggtgtacagctgtgcagttgcgcaagaa
aaatgctcaccagtaccaataaatgtgccctctgaggctgtcaacatgtcccttggattt
tcaatgactaaagatccccagtcttcaaagttagtggtctgtggcccaaccattcccaag
aactgtaagcattttactgcatacaatggcatgtgttttatattggattccaacaataat
ccatcagcacctataccaagtactttgagagattgcccacctccatcgcaaacagacatt
gctttcttgttggatggctctggcagtgtaagcactggggattttactataatgaagaat
tttgttataagcatggttaacggattaaaagacagggattttcagtttgcagttgcacaa
tattcttttgagtgtgaaatacacataaaattcaacagcttttcaagcactgatcaaata
cgttggatcaatcaatttagcggtggtaccaatactgccaaagctatcaaaaaagttgtg
tctgaattatttacccgtcaggcaggggccagagaaaatgctaacagagtgttggtggtc
atcactgatggtgaatcacatgaccggagtgaactgggaactgctgcgcgggaagcagag
cagaagaaaattactcgctatgctatcggggtcggtagagcctttaacaggcaagcagca
gcgaatgagttgaaaactattgcatcggatccagatgataaacacgtatttaaagtgaat
gacttttctgtactgaaggaaattcaagacacactggaagagaatatcattgcaattgag
ggaacccagacttcaggagaatccacaaggatggaatttgcacaggatggcttcagtgca
gactttgtttcatatgataacataataatgagtgcagttggagcgtttcagtggaaaggt
ggttatcagaggtacaattaccgtggaacacctttagactcctttcagaagggcgacagt
aatgacagttatttaggttattccatgacagtagcaaaaacatccagggagctctactac
atcattcagggagctccaagagataagcatatggggaaagtgaccatatcaggcaatgga
gtctttcagacactggattctcctgagcctcagattggtgcctattatggtgctgagtta
tgtgtggtggacttggatttgaacagcgtcgcagaccttctacttgtttctgctccactg
cataatgagggggatcaggaaggaaaagtcttcatctacacctttaccacatccttgtcc
cagcgacgtgtaaacctgaatgtaaagcacattcagtcagtgaaaggaatcccaggacaa
agggggaggtttggcctgacgttggccagccctgcagatctaaacagggacggtctggtg
gatgtagtgataggagcacctctagaggagaaaggagagggcagcatctatatctttaat
ggaagaaaagaagacattacccccaccttctcacagagaatcacaggctcttctgtacgc
actgggctgcaattttttggtttttctctgagtcagtctgctctggaccatagtggagac
cagctgccagatcttgctgttggttccaaaggagcagtcatacttttaagatctagaccc
attgtgaaactgtggaacaaagtaacttacaacccatccaaaatccccaccagagacacc
gactgcagcagtcctttgaaaaacacactaaaattgtgtttctctataataggatcaaat
actggcatgacagacttgactgcaaatgtaaactatacactaacacttgatgccaaacga
caaagctaccgagcctacttttcaccgaaaaaccgtgttcgatttggcatgatatctgtg
tcgatgcaggagaagtgcaatcagcatgaattttttatagagtcttgccccaatgatgca
ctaaatccattatctaatgagttagtgtatacgtttgagggtcttcctattgtaagacag
aacaatctacggccgatgctgcttcctaccacaaagaccaccttagataccaatctggat
tttgaaataaactgtggaatcgataacatctgcattgataatctcaaggtggattttaac
ttttctggatactcagtcatacaagttggaataatgcaggatatgaatgtaactgtcttt
gtagagaacagaggggaaaattcctacaacagtcgagtaattctcaaatacccatttgga
ctttccttcaggagagtcaccactaaacagggcagactggagtgtgtatctttggacagt
gatgaaaaagctgcgctgggggagactacatgtttcatcagtaaacccatcttcaagaat
aatggtttggctacctttgatgttacatatagcataaacaaagaaagtaactttgacagg
acggtgacgttcactgcaaatgctttcagtgacaatgacagacattcacctgacaatgaa
ctattcagaaggaaaaccattgatgttaaatatgccatctacattgcattgatcaggcat
gagaattccactatccacattaactttactgcagggaaaaatgaccttgagaaaccagtc
caccaaatattcaaggtggagaatgacctcagggatttgaacgtcaacattttcatcaga
gtacccataaaattaggagttaaggacatctggactaataacaacttgcagattcaaggc
tgcaatgcagagagagttgagcagcctacaatcccagattttgtggcagcactgcaaaaa
cagcctgaggtgaattgctccgtagctgtatgcagagtgtttaaatgtgctgcaaatctc
attagaaagcaaatgaaattctacgtcatctctggtaatgtcagctctggatggattgaa
cagactggactgcgttcagcagttttcgagctggtcagtacagcaacactggactataac
aaaacagcatatatcttcttctcctttgattctataaacactgcacctgttggcaagatt
aatacccaggtagaggtgtatgaggagaaattaccccttaaggagacaattggaggtgtt
gtaggagggcttgtgcttttggctcttatcactgctggcctctacaaggctgggttcttc
aaaagcaactataagaagatgttggaggaagcaggagcaggggctgagggacccagagga
gacgcagaggcactaagtcaagaatga
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integrated database retrieval system
