Pangasianodon hypophthalmus (striped catfish): 113527312
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Entry
113527312 CDS
T05759
Name
(RefSeq) ephexin-1-like
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113527312
Membrane trafficking [BR:
phyp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113527312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_9
SH3_1
SOS1_NGEF_PH
PH
RHG20_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
113527312
NCBI-ProteinID:
XP_026770817
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MGTNDRLKTKPPLPPKPQIKGGIPQKVLDSPPSSTNTTSGAQYRPTPKPRLRKPGPLKDT
LNRTGNADQPSLCNTDNAAPNGSSESHSVPPACPPCCPCVCHYSSMYGQKKSQQYEDNYI
ISSENKDNKEPRRVPPAIPVPARPLPKEPWQMIIMNVEGTTDDDNESIYAEPDMPKHDDT
APERYEPEPSGVAMKVPSQKPIPTARMAAQEQSKHQDSEHVISKSLRNKKKNKADKTKQN
KSSISVKRPTTISNCSRSQFFQTSAKCPEQSSAGMVPSAGLKVKRTRSSPCRQTKAKDGR
SWKMLQDSLWQERCVVKESGILNHLTKEELLLQESIYEVATSEQSYLERLTVVVNHFMES
PELNSAIASRDQKALFSSMHKMREISKNFLESMVQNLGSRLFCEGFCDVVHRYATGPFSA
YVDYIRNIPCQKQTLIKLRKESPRFVEILNKLQEDPCCNRLPLDSFLSLPFQRISQLKVL
METVLKRAASKSDIQASAEAALTEISEVLEACNREVGKMKQIEELVNIANKIEFECKALP
LVSSSRWLIRDGEMTQLTLNENIFVQRKNCTVHLILFNDLLLVASKKGSDRYVVHDHVHR
SLIEVTEGAKVEDDLEGYDMRRVFLLAILKNHKGSSYQLLLQTSTLEERDSWLKVLKSEE
GVYEEWDCPQVRCIEAYNGQQPGELSLQPEDIVSIIQKTSDGLMEGRRLPDGERGWFPAK
CVMEISNEHVQRRNLRQRHHVLQAAANILKRRSICQDQHTTTCFNKY
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaaatgacaggctcaagaccaaaccccccttaccccctaaaccccagataaaa
gggggtataccacagaaggtcctggattcccctccaagcagcactaacacgacaagtggt
gcacaatacagaccgacccctaaacctcgcctacgcaaacctggtcccctaaaggatacc
ctgaaccgaactggcaatgctgatcaaccctctttgtgtaacacggacaatgctgcccca
aatggatccagtgagagccactctgttcctccagcctgcccaccctgctgtccttgtgtt
tgtcattattccagcatgtacggacaaaagaaaagccaacagtatgaggacaattatatc
attagctcagagaataaagacaataaggaacccagaagagtccctccagctatacctgta
cctgcaagacctcttcccaaagagccttggcagatgatcataatgaatgtagaaggaacg
actgatgatgataatgaaagcatttatgctgaacctgacatgccaaagcatgacgacaca
gcacctgaaagatatgaacctgagccaagtggtgttgcaatgaaggtcccttcccaaaag
cccattcctactgcaaggatggctgctcaggagcagtctaaacatcaggacagtgagcat
gtcatctctaagagtttgaggaataagaagaaaaacaaagcagataaaacaaaacaaaac
aaatcatccatttcagtcaaacgtccgactacaatttccaactgttcacgcagtcagttc
ttccagacctctgcaaaatgccctgaacaatcaagtgcaggtatggtgccatctgcaggc
ttgaaggttaagaggacaagaagctctccatgtagacaaactaaagcaaaggatggccgt
tcctggaagatgctgcaggacagcttatggcaggagcgctgtgttgtgaaagagagtgga
atcctgaaccacttaaccaaagaggagcttctccttcaggagagtatttatgaggtggca
acttctgagcagtcctatcttgaacggctaactgttgttgtgaatcatttcatggaatct
ccagaactaaattcagctatagcttccagagaccaaaaagcactcttttccagcatgcac
aaaatgagagagatcagcaagaacttcctggagtcgatggttcagaatttgggctccagg
ttgttttgtgaaggtttctgtgatgttgtccatcgttatgccactggaccattcagtgct
tatgtggattacatccgcaacataccatgccagaagcaaacactcatcaagttgaggaag
gagagccctcgctttgtggagatcttaaacaagcttcaggaggacccatgttgcaatcgg
ctgcctctcgactctttcctctcgctgccttttcagaggatctcccaactcaaggtctta
atggagacagtcctaaagagggcagcctcaaagtcagacattcaggcctctgcagaagca
gccttgactgagatttctgaggtgctggaggcatgcaatagggaagtgggtaagatgaag
cagattgaggaacttgtcaacattgccaacaaaatagagtttgagtgcaaggccttgccg
ctggtgtcatcttctcgctggttaatcagagatggtgaaatgacccagctcactctgaat
gagaacatttttgtccagaggaaaaattgcactgtccatttgatcctcttcaatgatttg
ctactggttgcctcaaagaaagggtcagacaggtatgtggtgcatgatcatgtccaccgt
tccctcattgaggtcactgagggtgctaaagtggaggatgatctggaagggtatgacatg
agaagagtatttctactggctattttgaagaaccacaaaggaagctcataccaactttta
ctgcagacctccacactagaagagagagacagctggctgaaggtcctgaagagtgaggaa
ggagtgtatgaagagtgggattgtcctcaggtgcgatgtattgaagcgtataatggacaa
caacctggagagctcagtctacagcctgaggacatagtcagcatcatccagaaaacatct
gatggtttaatggagggtcggaggcttcctgatggggagaggggctggttccctgctaag
tgtgtgatggagatctctaatgagcatgtgcagagacgcaacctgcgtcagcgtcaccac
gtcctccaggcagctgcaaacatcctaaaacgccgcagcatttgtcaggaccagcacacc
actacctgcttcaacaaatattaa
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