Pangasianodon hypophthalmus (striped catfish): 113527371
Help
Entry
113527371 CDS
T05759
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113527371 (lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113527371 (lsg1)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
GTPases
113527371 (lsg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMR_HSR1
RsgA_GTPase
FeoB_N
AIG1
cobW
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
113527371
NCBI-ProteinID:
XP_026770952
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MGKKKGHGDGTGLGRALMKERLNAARGHRRNDTWLHTSELNDGYDWGRLNLQSVTEQSSL
DDFLATAELAGTEFTAEKLNIRFVPAEARTGLLTAEESTRLKKLHEDNRQFLRIPRRPHW
DENTSPELLQQAERDSFLTWRRELARLEEEQKLILTPFERNLDFWRQLWRVIERSDVVVQ
IVDARNPLLFRCPDLEKYVKEVSSHKVNMLLLNKADLLTREQRRAWAEHFQKEGIRAVFW
SALAEAQRLDAEEKGEDLGDLEDPSDTERKGATEKPSVHHSGPEVSQESSQEEEEDDEED
DGEDDTTASFEDCTSEADWHTCSEASGDEEEKEKCRASSDGASFYNSSHLLRKDELLEMF
KSAHSGPKCKEGQLTVGLVGYPNVGKSSTINTIFRNKKVSVSATPGHTKHFQTLFVEPDL
CLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPAISLVCQTIPRAVLEGIYGINIVR
PREDEDPDRPPTSEELLSAYGYMRGFMTAHGQPDQARSARYVLKDYVSGKLLYCHPPPHI
NAKDFQPQHLKFVNQTIKSGPSTCISKPPKVKQIENTVDKTFFHQENVRALTKGVQMVMG
YKPGSGLQAQGKAGAEQQDGKPWKKHGNRNKKEKVRRLNKHLDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaagggccatggagacggtacaggtttaggaagagctttaatgaaggag
agactgaatgcagcccgaggacacagaagaaacgacacatggctccacaccagtgaactg
aatgacgggtatgattggggtcgcctgaatttgcagtctgtaacagagcagagctctttg
gatgattttctggccacagctgaactcgcaggaacagaatttactgcagagaaactgaac
atcagattcgtaccagctgaagccaggactggcctactgacagccgaggaatccacgaga
ctgaagaaacttcatgaagacaacagacagttcctccgcatcccacgaagaccacactgg
gatgagaacacaagccccgagctcctccagcaagccgaaagagacagcttcctgacatgg
agacgagagctggcaaggctggaggaggagcagaagctgattcttaccccttttgagagg
aacttggatttttggaggcagctttggagagttatcgagagaagtgatgttgtagttcaa
atagttgatgccagaaaccctttgctgtttcgctgtccagatctagagaaatacgtcaaa
gaggtttccagtcacaaggtgaacatgctactgttgaacaaagcagatctgcttacccga
gagcagcgtcgtgcctgggccgagcactttcagaaagaaggcatcagagcagtgttctgg
tctgcgctggccgaggcacagcggctggatgctgaagaaaagggagaagatctcggtgac
cttgaggacccaagtgatacagaacgtaagggagccacagagaagccgtcagttcaccac
agtggacctgaggtctcacaggagagcagtcaagaggaagaggaagatgatgaggaagat
gatggggaagatgacacaacagcgagttttgaggactgtacttcagaggcagactggcac
acttgctcggaggcatcaggagacgaagaggagaaagagaagtgtagagcgtcttcagac
ggtgcttctttttataactcaagccatctgctgcgcaaagatgaactgctagaaatgttt
aaatctgcacattctggacccaagtgtaaggagggccaactcacagtaggactggtgggt
tatcctaatgttggcaaaagctccaccatcaacaccatctttaggaataagaaagtctct
gtttcagctacacctggacatacaaagcactttcagacattgtttgttgaaccggatctt
tgcctgtgtgactgtcctggcctagtcatgccttccttcgtgtccaccaaagccgagatg
atctgtagcgggattctccccattgaccagatgcgagaccacgtcccagccatctctctc
gtttgtcagacaattccacgagctgtgctggagggaatctatggcatcaacatcgtcaga
ccgagagaggacgaagatccggatcgccctcccacctccgaggagctgctttcagcttat
ggatatatgaggggcttcatgacagcacacggtcagccagaccaggccagatcagcccgc
tatgtcctgaaagactacgttagcggaaagctgctctattgtcaccctcctccccacatc
aacgctaaagacttccagcctcagcacttaaagtttgtaaaccaaactattaagagtggt
ccttccacgtgtatcagtaaacctcccaaggtcaaacagattgaaaacactgttgataaa
accttctttcaccaggaaaacgtccgtgcactaacaaagggagtgcagatggtgatgggc
tacaagcctggcagtggcctgcaagcgcagggaaaagcaggcgcagaacagcaagatggg
aaaccatggaaaaaacacggcaacaggaacaagaaggagaaagtgagaagactcaataag
cacctggacgcttga
DBGET
integrated database retrieval system
