Pangasianodon hypophthalmus (striped catfish): 113527377
Help
Entry
113527377 CDS
T05759
Name
(RefSeq) ATP-binding cassette sub-family A member 5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113527377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113527377
Transporters [BR:
phyp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
113527377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Bac_rhamnosid_N
Motif
Other DBs
NCBI-GeneID:
113527377
NCBI-ProteinID:
XP_026770937
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MQPVNKRDAGVWQQTRSLLYKNILIKWRTKQQSLQELILPLLLLGLLILISMLNPHISYG
SINTTDLEDEEYPSFKGLGYTPITNVTSQIMEEVAQELHMQDRLEMFSSEEDLENASLYE
PLSYVGVVFLDQMSYKLRFPYHQVPLPSDYTESIANCYTNYLNCRAANYWVSGFIRLQSL
IDAAIIQMQTKRSAWRELNVHVVMMGHPGSVEVQKFPHALISIYLLLAFTPFVSFLIVNV
AAEKEHRLKDTMTMMGLYDTAFWLSWGLLYAALVTTMSVLMAVIATWTPLFSNSNFLIIF
LLIFLYGISTIFFSFLLTPLFKKPKFAVTMGSMLTLVFGSLSLFTVLMRDFPQLAVWLFC
LLSPSAFSIGIAQVVYLEAQEDGAVFSTLANGPHPLYVPLLMLCLDCILYLLLAIYLEQV
LPGEFGKRRSIFYFLKPYYWSRRRKRYVEVSSVYVAEVNGTPAADESVEPVSPEFRGKEA
IRICNIRKTYKGKDNTVEALRGLTFDIYEGQITALLGHSGAGKSTLMNILCGICPPTEGS
ATIYGSPVAEIADGAEMKHLVGICPQFNIIFDVLTVEEHLKIFAAIKGILPCDIDNEVKK
VLKALDLEKIMDAQAKNLSGGQKRKLSVGIAILGDPKILLLDEPTAGMDPVSRHQVWSLL
KSRRAGRVTVLSTHYMDEADILADRKAVISQGQLKCVGSSLYLKTKCGVGYHLRMSVTGT
CEVDSLTSLVKQHVSKAELSRQQEAELTFTLPFESMETFPGLFAELDSRSDLGIINYGVS
MTTLEDVFLRLEAEAEVDQADYSVFNQEKVEEGGDASCLDDVDQRLLTFSEERHDAVTGH
TLWRQQFSTVAWLHMLNLQREKKPIIYNVTLFLVFLTAVLVLSLATGNIQIHSPERQFQP
IYLLRSHEAPHKYATSLLVLNSSDSDISGFIHNLESQDIKVEIMKKPDYMSAAPHSAAIN
VIGSSKDFSYSVAFNSTTVHSLPMAVNILSNALLRGYNGTGHINTWTKPFDYQIPDSTSY
ALVYIEAVILGMLAAGMPAYFAMDHTRDREIKCRSTLRISGLVPSAYWCGQAAVDIPFYY
LILICMTCTLFAFHSTDLLSNSNVLAVIICLIGFCPATILFTYCVSFMFAKVQSNRDFFS
VVSMMVCVVSASIVQLVFVNDNPGLTRFLHNVLCFFNPLYPLMGCLNCITKATFLRPFHE
EFLWKNLLIAVIAPYFQCILLLFLLRWLEICYGGQTMKNDQLCRISCKSKGKVQRNPEEN
INEDEDIMVEKARVREALTCQCCEEKPVVVVSNLRKEYLVKKEGFSLSKKRKVAAKNISF
CVRKGEVLGLLGPNGAGKSTIMHMLSGDTTPTAGQILMGDYGTEFRPVDNPLDHVGYCPQ
VNPLWPRITLQEHLQIYAAIKGLHHNDVPNILRRVVNALELKEHLHKQAKSLSAGLKRKL
CFALSMLGNPQIVLLDEPSSGMDPKSKQRMWRAMRVAFRNKQRGAILTTHYMEEAEAVCD
RVAIMVSGQLRCIGSIQHLKGRYGRGYSLEIKLREELAGLQQVALLHKEILKIFPHAARQ
ESFATLMVYKIPMEDVKSLAKAFSQLESAKQNFNFEEYNFSQSTLEQVFMEFAKEQENEE
EEVGSLSTTFQWQRLPQDGRASINHSDSIVHQL
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgtaaacaaaagagatgctggagtgtggcaacaaacccggagcctgctctac
aaaaacatcctcatcaaatggagaaccaagcaacaaagtctgcaggagctgatccttcct
ctgctccttttgggccttctcatcctcatcagtatgctgaacccccatatctcttatggc
agcatcaatactactgatcttgaggatgaggagtacccgtcattcaaaggcctgggctac
acccccataacaaatgtcacaagtcagattatggaggaggtggcacaagagctacacatg
caggaccgattggagatgttctctagtgaagaagacctggaaaacgccagcctgtatgag
cctctaagctacgtgggcgtggtgttccttgatcaaatgtcctacaagctacgttttccc
taccaccaggtccccctacccagtgactacactgagtcaattgcaaactgttacacaaat
tatttaaactgccgtgcggcaaactactgggtctctgggttcatacgcttacaatcactg
attgacgctgctatcatccagatgcagacgaaacgttcagcatggagagagctgaatgtg
catgtggtaatgatgggtcacccaggctcagtggaggtccagaagtttccccatgcgctc
atctccatctatctattgctggccttcacgccattcgtctccttcctcattgtcaatgta
gcagctgagaaagagcatcgactcaaagacaccatgaccatgatgggactgtatgacacg
gcattctggctctcatggggtcttctctatgctgccctggtgacaactatgtctgttctt
atggctgttattgccacatggacccctctcttctccaacagcaatttcctcatcatcttc
ctcctcattttcctctatggcatatccactattttcttctccttcttgctgactcctttg
tttaagaaacccaagtttgcagttacaatgggctccatgctgaccctggtgtttggctct
ctgtctctgtttactgtgctgatgagggactttccccagctggcagtctggctgttctgc
ctgctttcccccagtgccttctcaattggtattgcacaggtggtgtatctggaggcgcag
gaggatggggcagtcttctccactctggctaatgggccgcatccactctatgtgccactg
cttatgctttgtttagactgcatcctctatctgctgcttgccatttatctagagcaggtt
ctgccaggtgagtttggaaagagacgctctatattctacttcctgaagccttattattgg
tcaagacgcagaaagcgctatgtggaagtgagctctgtgtatgtggcagaggtgaatgga
actcctgcagctgatgaatcagtagaacctgtttctcctgagtttagaggcaaagaagct
atcaggatctgtaacatccgtaaaacctataaagggaaagacaacacagtggaagcactg
agaggtttgacctttgacatctatgaaggccaaattacagctctgttgggtcacagtgga
gcaggaaaatctaccctcatgaacatcctgtgtggcatctgtcctccaacagaaggctct
gctaccatatatggctccccggtggcagaaatagcagatggggctgagatgaagcatctt
gtggggatctgccctcagttcaacatcatctttgatgtgctgactgtagaggagcacttg
aagatttttgcagctattaaaggaatcctgccctgtgacattgataatgaggttaagaaa
gttttgaaggctcttgacctggaaaagatcatggatgcacaggcgaagaacctgagtgga
ggtcagaagaggaagctgtctgtgggcattgcaattctaggagaccccaagatcctgctt
ttggatgaacctacagctggtatggacccagtatcacgtcaccaggtgtggtcattactg
aagagtcgcagagcaggcagagttactgtccttagcacacactatatggatgaagcggac
attcttgcagatcgtaaggcagttatctctcaaggccagctgaaatgtgtgggctcttct
ctctacctcaaaaccaaatgtggtgttggctaccacctcaggatgtctgtgactggaacc
tgtgaggtagacagcctcacatcattggtcaagcagcatgtttcgaaggctgagttgtca
aggcaacaagaagctgaactcacattcacgttgccttttgagagcatggaaacatttcca
gggctttttgctgagctggacagtagatctgacttgggcatcattaactatggtgtttcc
atgacaacattagaagatgtctttctgcgtttggaagcggaagcagaagtggaccaggca
gactacagcgtgtttaaccaggagaaggtagaagaaggaggtgacgcctcctgtctggat
gacgtggaccagagactactgaccttctcagaggaaaggcatgatgcagtgacaggtcac
actctctggaggcagcagtttagcactgtggcctggctccatatgctcaacctgcagaga
gagaagaaacccatcatatacaatgtgacgctgttcctggtcttcttgactgcagtactg
gttctgtcgctggctacagggaatattcagatccactcccctgagagacagttccagcct
atttatctgctccgcagccatgaagcgcctcacaaatacgctaccagcttgcttgtgctc
aactcatctgattcagatatatcaggctttattcataacctggagtctcaagacattaag
gtggaaataatgaagaaacctgactacatgtctgctgcacctcacagtgctgccatcaat
gtaataggttctagtaaggattttagttacagtgtagcctttaacagtaccacagtgcac
tctttgccaatggcagtgaatattctaagcaacgccctcctcagaggctacaatggtact
ggtcacataaacacctggaccaaaccctttgactatcaaattccagattcaacgtcttat
gctctggtttacattgaggctgtgatactggggatgctggcagctggaatgccagcctat
tttgcaatggaccatacacgagatcgagagataaagtgtcgttcaacactgaggatctct
ggtttggtgccgtcagcatactggtgtgggcaggcagctgtagatatccccttctactac
ctcatcctcatctgtatgacctgcacattgttcgcctttcactccacagacctgctttcc
aacagcaatgtcttggctgtgattatttgtctcattggtttttgcccagccacgatcctc
ttcacatattgtgtgtcattcatgtttgctaaagtccagagcaacagagactttttctcc
gtggtctctatgatggtttgtgtagtgtctgcctccatagtccagctggtctttgtgaat
gataatccgggactaacacgtttcctacataatgtgctgtgtttcttcaacccattgtat
cctctgatgggctgcctcaactgtattaccaaggctacatttctgcgacctttccatgag
gagttcctttggaagaatctacttattgctgttattgctccctacttccagtgcattttg
ctgcttttcttgctgcgatggctagagatctgctatggaggccaaacgatgaaaaatgac
cagctgtgcaggatttcttgtaaatccaagggcaaagtgcagcggaacccagaggagaat
attaatgaggatgaggatattatggtggagaaggctcgagtgagggaggccctcacctgt
cagtgctgtgaagagaaaccagtggtggtggtgagtaacctgaggaaggagtacttagtg
aagaaagaggggttctccttaagtaaaaagagaaaagtggctgccaagaacatctccttc
tgtgtccgaaaaggtgaggtcctggggcttctgggacctaatggagcagggaagagcacg
atcatgcacatgctctctggagacacgactcccactgcaggacaaattttgatgggagac
tatggcacagagttcagaccagtggataacccacttgatcatgtaggttactgcccccag
gtaaacccattgtggcctaggatcaccctacaggagcacctccagatctatgctgcaatt
aagggtttacaccacaatgatgtaccaaacatcctcagacgtgtggttaatgcactggag
ttgaaggagcaccttcataaacaggctaaaagtctgtctgcaggccttaagaggaagttg
tgttttgcactaagcatgctggggaaccctcagattgtgctcctagatgaaccttcatct
gggatggaccccaagtctaagcagcgtatgtggagagcgatgcgtgtggcctttagaaac
aaacagcgtggcgctatcttgacaacgcactacatggaggaggcagaagctgtgtgtgac
cgagtggccatcatggtttctggccaattacggtgcattggttccatacagcacctaaaa
gggagatacggtcgaggttacagtctggagattaagcttcgagaagagctcgcaggcctc
cagcaggtggcactactacacaaggagatactaaagatctttcctcatgctgcacgccag
gagagttttgccaccttgatggtttataagattccaatggaggatgttaaatcactagcc
aaggctttctctcagttagaaagtgctaagcagaacttcaattttgaagaatacaacttt
tcccagtctaccttggagcaggttttcatggaatttgctaaagagcaggagaatgaggag
gaagaagtgggctctctcagcaccaccttccagtggcagcggctcccgcaggatggcaga
gcatccatcaatcattctgatagcattgtgcatcagttgtga
DBGET
integrated database retrieval system
