Pangasianodon hypophthalmus (striped catfish): 113527378
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Entry
113527378 CDS
T05759
Symbol
myof
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113527378 (myof)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Others
Ferlins
113527378 (myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
Pex24p
Motif
Other DBs
NCBI-GeneID:
113527378
NCBI-ProteinID:
XP_026770939
LinkDB
All DBs
Position
Unknown
AA seq
2060 aa
AA seq
DB search
MLRVVVESASGLPKKKLGSPDPIASVVFKGETKKTRSISNEINPVWKETLEFDLKGSPLD
SSSFIDVIVKDFETLGKDKFIGSAKVYLNDLASGQVKSLPSKNLALVNDSGQNIGATIDL
LIGYEPPANAPPNPNDQHDGGVAGNAGGADGGEDATDTGGLSSPTQPGQKSQWRARKQRP
LSNKPQDFQIRIRIIEGRQLPGNNIKPVVKIHVCGETHRTRIKRGNNPFFDEMFFYNVHM
LPSDLFDQHVSIRVYNSSSLRADSLMGEFKIDVGYIYDEPAHCVMRKWLLLNDPDDSSSG
AKGYLKVSMFIVGTGDDPPVEKREQDSDNDDVESNLLLPAGVAMRWVILQLKVFRAEDVP
QMDDSITQSLKEAFGGESDKKNLVDPFVEAWFAGKKLCTKVIEKNANPEWNQLLNLQVKF
PSMCERIKLTVFDWDRLTRNDAIGTTFLNLTSIASSGGEVEEEDPGNGFPGYTGETGESE
VGFLPAFGPSYINLYGSPREFTGLIDPYEDLNYGKGEGAAYRGRVLVELSTKLEGKAEKD
VEAISNDDILVAQKYQRRRKYCLCAVFHSATMIQEPGEPIQFEVSIGNYGNKLDSTCKPL
ASTTQYSCAMFDGNQYYYLPWADTKPVVAVMSFWEDISHRLDAVNIILHIANRLQDNITE
LKTAVLAKVPDTKLFEIWNKLLSQLMEDISSLKLPDLEAKANLTALDIKIKKLRDSTLQS
ILTAAEGLLQESANITDSVATIDGWLDKLKQLAEEPQNSMPDVIIWMLRGEKRVAYGRIP
AHQVLYSVYSEQACGQYCGKTQTVFLKYPMDKNKGSKIPAQLRVNMWLGLVAVEKKFNAY
AEGTFNVFAELYENQAKMLGKWGTSGLLNRPKFSDVTGKVKLKQEYFMPPGGWQWEGDWF
VDPEKSLLTEADAGHSEFVDEVFENQTRYPGGEWAAASEPYTDVNGEKAHPPEEIECPRG
WKWVDDWTFDDKRAVDERGWEYGITIPPDDKPRSWVAAEKMYHVHRRRRKIRLRKKVAGG
ASATEKKDTGDPEGWEFSSLIGWKFHQKERSSDTFRRRRWRRKMEPSDSIGASGIFKLEG
ALGIDMEAKGDEKGSKSDPTNLFGANTPSVSCTFDRAYEYHLRVYVYQARNLLALDKDSF
SDPYVHVSFLHMSQTTETVKATLNPTWDQTLIFNRVQIYGDPQILARNPPQVVLEIFDSD
QVGKDELLGRGSLLPLVKLNPAMDTSPKLLWCPVTHKEVPAGQILVSAELILRNKGNETE
LPLVPPKRGDMLYMVPQGVRPVVQLTAIEILAWGLRNMKTYQLAPVTSPSLVVECGGERI
QSAVIKNMKKSPNFPGNVLQLKVLLPKEEMYTPPIVLKIIDHRPFGRKPVVGQCTIDSLE
EYRCDPYSTMAEVAMSSKVALMAAAPQELHINIEERPLLETQFMHGISSAFDKMAPSFLL
RQEKEKETIDWWSKFYASVGEHEKCGPYLQKGYDTLKVFNCELENVADYKGLADFCNTFK
LYRGKSDTGEDDPSVVGEFKGSFKLYPLSDDPAVPSPPRQFRELPDSGPQECIVRIYVIR
AVDLQPKDNNGLCDPYIKIALGKKTIDDRDNYIPNTTNPMFGRMFEMSCFLPQDKDLKIS
VYDFDLLTRDEKVGETVIDLENRLLSRFGSYCGLPQTYCISGVNQWRDQLKPSQILQNHA
RLKGVSPPSSEDNGNTLSFNGQEYQLSDFEANKEIHQHLGPPSERIALHVLRTQGLIPEH
VETRTLYSTFQPTLSQGSLQMWVDVFPKSLGLPGPPFDITPRKAKKHILRVIIWNTTNVI
LDETSITGESMSDIYVKGWMAGKEEDKQKTDVHYRSLDGDGNFNWRFVFEFDYLPAEQLC
LVSKKEHFWSLDKTEFRIPPQLIIQIWDNDKFSLDDYLGTVELNLHNLISPAKTPEKCSL
HMLDNVTKTHQKFDQSKSLFAQKSVRGWWPCYLEKDGKKELGGKVEMTLEIVNEKEADER
PAGKGRDEPNMNPKLNPPNRPETSFFWFTNPCKTLKFIVWRRFKWLFIGLVILLLVLLFL
GILLYSLPNYISMKIVQPIK
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgttgtggttgagtctgcttcgggtcttcctaaaaagaagctgggcagtccg
gaccccatcgcatctgtggtgtttaaaggagaaacgaagaaaactcggtccatcagcaat
gaaattaatcctgtctggaaagagacactcgaatttgacttaaagggttcccctcttgat
tcctcctccttcattgatgtgattgtaaaagactttgagactcttggaaaagacaagttt
attggctctgcaaaagtctacctgaatgacctagcaagcggtcaagtgaagtccctccct
tcaaaaaatttggctttagtcaatgacagcgggcaaaatattggagccacgatcgatctg
ctaattggctatgaaccgccagctaacgctcctccaaacccaaacgatcaacacgatggt
ggtgtggcaggaaatgcaggtggggctgatggaggtgaagatgccactgatacggggggt
ttatcatctcccactcagccaggccaaaaatctcagtggagggccagaaaacagcggcca
ttatccaacaaaccgcaagacttccagatccggatccggatcatcgagggtcgtcagttg
cctggaaacaacataaagcctgttgtgaaaatacatgtttgtggagagacccataggact
cgcatcaaaagaggaaataaccccttctttgatgagatgttcttctacaatgtccacatg
ctgccatcagaccttttcgatcaacatgtcagcattcgggtgtacaactcttcatcactg
agggctgacagtcttatgggagagtttaagattgatgtcggctacatctacgatgagcca
gctcactgtgttatgaggaaatggctgcttttaaatgaccctgatgactcaagctctgga
gcaaagggctacctgaaagtcagcatgttcatcgtggggaccggggacgatcctccggtg
gagaagagggagcaggacagtgataatgatgatgtagagagtaaccttctgctgccagct
ggagttgcaatgagatgggttatactgcagctcaaagtctttcgtgccgaggacgtcccc
cagatggatgactccatcactcaatctttgaaagaggcatttggaggagaaagcgataaa
aagaatctagtagatccattcgtcgaggcctggtttgcagggaagaagctatgcacaaaa
gtaattgagaagaatgcaaaccctgaatggaaccagctgcttaatcttcaggttaagttt
ccgtctatgtgtgaacggatcaaactgactgtattcgattgggatcgcctcacaagaaat
gatgccataggcactacattcttgaatctgacctcaatagcgtcctctggtggtgaagtc
gaagaggaggatccaggaaatgggtttccaggatatacaggagaaactggggagtctgag
gttggctttctgcctgcatttggcccaagctacattaacctttatggcagcccaagggag
tttacaggtttaattgatccttatgaagaccttaactatggaaagggggaaggggcagcc
tacagaggacgggttcttgttgagctttccactaagcttgagggaaaggcagagaaggat
gtggaggccatatcaaatgatgacatcttggttgctcagaaataccagcgaaggaggaag
tactgcctgtgtgctgtgttccacagtgccaccatgatacaagagcctggggagcctatt
cagtttgaagttagcattgggaactatggcaacaagctggactctacatgcaaacctctc
gcttcaaccactcaatacagctgtgccatgtttgatggtaatcagtactactacttgccc
tgggctgacacaaagcctgttgttgccgtgatgtcattttgggaggatatcagtcatcgc
ttagatgctgttaacatcattctccacattgcaaaccgtttgcaagataacatcaccgag
ctgaaaaccgcagtactggctaaagtcccagacacaaaactgtttgagatttggaacaag
cttttaagccaactcatggaggacatcagcagcttgaaactcccagacctggaggctaag
gctaacctcacagccctggacatcaagattaagaagctaagagacagcaccttgcagagc
atcctgaccgcagctgagggcttgttacaggagagtgctaacattacggacagtgtggcc
accattgatggctggctggacaaacttaaacaactggctgaggagccccagaacagcatg
cctgatgtgattatctggatgttgagaggagagaaacgtgtggcctacggtcgcattcca
gctcatcaagttctatattcagtgtacagcgagcaggcatgtggccagtactgtggaaaa
acccagactgtctttctaaagtacccaatggataaaaacaagggttccaagatccctgcc
caattacgggtgaatatgtggctgggattagtcgcagtcgagaaaaagttcaatgcttat
gctgagggaacattcaatgtttttgcagaactgtacgagaaccaggcgaaaatgttgggc
aagtggggtacttcgggtctgctgaatcgccctaagttctccgacgtgactggcaaagtg
aaactaaagcaggagtactttatgccccctggaggctggcaatgggaaggtgactggttc
gtggatccagagaaaagtttgctgacggaggctgatgcaggacacagtgagtttgtggac
gaagttttcgagaatcagactcgttatcctggaggagagtgggcagcagcgtcagaaccg
tatacagatgtgaatggagagaaggctcatcccccagaggagatagagtgtcctcgtgga
tggaaatgggtggatgattggacctttgatgacaaaagggcagtggatgagagaggttgg
gaatatggcatcacgattcctcctgatgataagcctaggtcgtgggtggcagctgagaaa
atgtaccatgtccatcgccgtagaagaaaaatccgactgcgcaaaaaggtggccggtggt
gcctcagccactgagaagaaagatacaggagatccagaaggttgggagttttcttctctt
attggatggaagttccaccagaaggagcgctcctctgatacgtttcgccgacgccgctgg
agaaggaagatggaaccttctgatagcatcggggcgtcaggaatctttaaattagagggg
gcactgggaattgatatggaagcaaagggggatgaaaagggttcaaaatcagatcccact
aacttatttggagccaatacacccagtgtgtcatgtacttttgaccgagcctatgaatac
cacctacgggtctatgtttaccaggccagaaacctgcttgccttggacaaagatagtttc
tcggatccatatgtgcatgtgtcattcttacacatgagccagaccacagaaacagtcaag
gccactttgaacccaacctgggatcaaactcttatcttcaacagagtgcaaatctatggg
gatcctcagatccttgcacgcaacccacctcaagttgtgttggagatattcgacagtgac
caagtgggcaaagacgagctgttgggcaggggcagcctcctgccattagtgaaactgaac
ccagccatggatacatctcctaagcttctctggtgccctgtcacgcacaaggaagtgcct
gctggacaaatactggtttccgcagagctcattttaaggaacaagggaaatgagactgaa
cttccccttgtcccaccaaagagaggagacatgctatacatggtgcctcaaggggttcgt
cctgtagtgcagctcactgccatagagattctggcatggggtttgcgcaacatgaagacc
taccagttggcacctgtgacctctccgagcttggttgtggagtgtggaggtgagaggatt
cagtctgcagtcatcaagaacatgaaaaagagccccaacttccctggaaatgttcttcag
ttgaaagtgctcttgcccaaagaggagatgtacacacctccaattgtgctgaaaattatt
gatcataggccatttgggaggaagcctgtagtaggccagtgcaccattgactcactggaa
gaatacagatgtgacccttatagcaccatggctgaagtggctatgtcatctaaagtggct
ttgatggcagccgcccctcaagaactccacataaatatagaggaaaggcctcttcttgaa
acacagtttatgcacggcatctcatcagcgtttgacaaaatggctccatcttttctactc
cgtcaagagaaggagaaagagacgattgattggtggagtaagttttatgcttcagttggg
gaacatgagaaatgtggcccataccttcagaaaggttatgacaccctgaaggtgttcaac
tgtgaacttgaaaatgtggctgattataaggggctggctgatttctgtaataccttcaaa
ctctaccgtggaaagagtgacaccggtgaggacgacccctctgtagttggggagtttaag
ggatccttcaagctctacccgctctcagatgacccggccgtaccctcacctccacggcag
ttcagagagcttcccgacagcggccctcaggagtgtatcgtcaggatctacgtgatcaga
gcagttgacctgcaacccaaagacaacaacggtttatgtgatccatacattaagatcgct
ttgggaaagaagaccatcgatgacagagacaattacataccaaataccacgaacccaatg
tttggaagaatgtttgagatgtcatgcttcctccctcaagacaaagacctgaagatctca
gtttatgactttgatctgcttacccgtgatgagaaagttggagagacggtgattgacctg
gaaaaccggttactttctcgttttggatcttactgtggtctgccgcagacgtattgcata
tctggggtaaatcagtggcgagatcagctgaagccgtcgcagattcttcagaaccatgca
cgcctgaagggagtgtctcctccttcatctgaggacaacgggaacaccttaagtttcaac
ggccaagaatatcagctctctgactttgaggctaacaaagaaattcaccagcacctgggc
ccaccgagtgagcggatcgcactgcatgttctcaggacacaaggcctcattcctgagcat
gtggaaaccagaacactctacagcaccttccaacccactctgtctcagggaagtcttcaa
atgtgggttgatgttttccccaaaagccttggacttcctggacctccttttgatattacc
ccacgcaaggctaaaaaacatatcttgcgcgtcatcatttggaacaccactaatgtcatt
ttggatgaaaccagcatcactggagagagtatgagtgacatctatgtgaaggggtggatg
gcaggaaaagaggaggacaagcaaaaaactgatgtccattacagatctcttgatggtgat
ggaaatttcaactggagatttgtctttgagtttgattacctgcctgctgagcaactgtgc
ctggtttccaaaaaggaacatttctggagtcttgacaaaacagaattccgaattccacct
cagctgatcattcagatatgggacaatgataaattctccctggatgattaccttggcacc
gttgaactgaatctgcacaatctcatctcccctgctaaaacacctgagaaatgcagcctg
cacatgctggataatgtgactaaaacacatcagaaatttgaccagtccaagtccctgttt
gcccagaaatcagtcagaggatggtggccctgctaccttgaaaaagatggaaagaaggag
cttggtggcaaagtggagatgacactggagatagtgaatgagaaggaggcagatgagaga
ccagcaggaaaaggcagagatgaacccaacatgaatccaaagctcaacccacccaaccga
cccgaaacttccttcttctggttcaccaacccatgcaagacgttgaagttcattgtgtgg
cggagattcaagtggctgtttattggcttggttatactgctattagtgctgctgttcctt
ggaatacttctttattcattaccgaactacatctcaatgaaaattgtgcagccaattaaa
tga
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integrated database retrieval system
