Pangasianodon hypophthalmus (striped catfish): 113527506
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Entry
113527506 CDS
T05759
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113527506 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113527506 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113527506 (snf8)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
113527506 (snf8)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113527506 (snf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
MarR_2
AbiEi_4
CDK5RAP3
Sigma70_r1_1
MarR
DUF4896
Motif
Other DBs
NCBI-GeneID:
113527506
NCBI-ProteinID:
XP_026771193
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKTHLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKDSLKWEKERACHVLDHLLKEGLAWLDTQAAGEPQYWLPALF
SELSSRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaggagttggagcaggggctatcgccaagaagaaacttgcagaggccaag
tacaaagagagaggtacagtcttagctgaagatcagattgtacagatgtctaagcagtta
gaaacattcaaaacacatttagaagagttcgccagcaaacacaagcaagagatccgaaag
aattcacaattcagagtgcagtttcaagaaatgtgtgccacaataggagtggatccactg
gcatctggtaaaggattttggtctgagatgctcggagttggagacttctattatgagctt
ggtgtacagataattgaagtctgtctagctctaaagcacagaaatggcggactaattaca
ttagatgaacttcatcagcgtgtattaaaaggaagagggaagtttgctcaagacgtgagt
caagatgacttagtacgagccatcaaaaagcttaaggcaatgggaaatggctttgggatg
attcctgttggaggctcctatttagtccagtcagttccagctgagctcaatatggatcac
actgttgttcttcagctggctgagaaaaagggttatgtgacagtaagcgagatcaaggac
agcctgaagtgggagaaagaacgggcttgccatgtacttgaccacctgctgaaagaaggg
ctggcatggttggatacccaggctgcaggagaaccacaatattggctgcccgccctcttc
tctgaactttcttctcgtgatgtcacgcctgaggaagcgaatcagatgacaccatga
DBGET
integrated database retrieval system
