Pangasianodon hypophthalmus (striped catfish): 113527540
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Entry
113527540 CDS
T05759
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113527540 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113527540 (bms1)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
90S particles
GTPase
113527540 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
MMR_HSR1
AAA_22
AAA_16
nSTAND3
AAA
Motif
Other DBs
NCBI-GeneID:
113527540
NCBI-ProteinID:
XP_026771263
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MEGKEQKRHQQKQSGPKAEKKKKRKQKDQGAELDQDERKRNPKAFAVHSAVRMARTFHRT
QDIKTKKHHIPLVDRTPLEPPPVLVVVMGPPKVGKSTLIRCLIKNYTRQKLSDICGPVTI
VSGKKRRLTFIECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRVM
GVLTHLDSFKNTKSLNKTKKRLKHRFWTEVYQGAKLFYLSGMVYGEYQTQEVKNLGRFIS
VMKFRPLVWQTSHSYVLADRMEDLTDPEAIRLDPKCDRTVSLYGYLRGTFLKNKGQVHIP
GVGDFSVSDISFLPDPCPLPEVLKKRALNEKERLLYAPMAGVGGVVYDKDAVYIDMPVGH
VKQDQEEVRPATELMQSLMGTQATLDVKIAASKVSLFTGTAALTPEEVQEKSGKEGPVES
RVWDPVTRRERRKAVFSDEAEKDNGEESDEEESDEEGESMEEKADEEEEEEDDAEEDDDD
DDDDDDDEEEEEEEEEVEHGDDDDDEEEEEDRADESKLDKSEVARDGRKMVKEAAPPIKR
QKLEENGKDSRPVVEMPVFADSDDDLEKSDEEESEEEEMDEDEEEEEEEEEEEEMEEEKQ
NPQKRSSAPPDSGHCSEEDSDDDDDDDDDDEGEEVQGDSDSEMEEQLNVKPALRGAAKLK
MASGEEEEEEEEEEEEEEEEMDAEDEGELGSETAGALRWKEDLTRKAMEAHQRRQRAAPN
LRKLVYGTVVEVEEEANSEEEELGGLFRVSRPEKSKRVRADAVDCSRFQPDASHDWDQEE
MLASIRDCFVTGKWEGDKDAATLLKEDDEIYGDFEDLETGEVHKVNSGKGDEAEQGDDDE
GEEEEEEEEEPKLVKVDDEEAQKNKRLEKKKRLKERFNAEYDDGDATYFDDLKEEMQKQA
ELNRAEFEDMDDETRVQYEGFRPGMYVRVEIPALPCEFVTNFDPHYPVILGGLGASEGNI
GYLQMRLKKHRWYNRILKTRDPLILSLGWRRFQTIPLYHIEDHNGRHRLLKYTPEHMHCG
ASIWGPITPQGTGFLAVQSVAGTQANFRIAATGVVLDLDKSVTIVKKLKLIGYPYKIFKN
TCFVQGMFNTVLEVAKFEGASIRTVSGIKGQIKKALRTPPGTFRATFEDRLLMSDVVFLR
SWYPVSIPQLYNPVTSLLMSVGQKDTWMGMRTLGQLKHDLGIRNQPNQDSLYKPIVRQKR
HFNILHIPKELQKALPFKSKPKHLEAMGKTPRDLQRPVVIREPHERKVAALLDALSSVYS
HKTKKAQAEQRMKHKEFLKKKEKQEAEKLKRQKEERKKVYRAMGQKEKKKLKASLKGASK
DD
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaggagcagaaacggcatcagcagaagcaaagtggccccaaggctgaaaag
aagaagaagaggaagcagaaggatcagggtgcagagctggaccaggatgagcgcaaaaga
aatccaaaagcctttgcggtgcattcggccgtgcgcatggccaggaccttccacaggacc
caagacataaaaactaagaaacatcatatacctttggtagaccgcacacctttggagcca
ccacctgtcttggtggttgtgatggggcctccgaaagtgggcaagagcaccctcatccgt
tgcctgatcaaaaattacacacggcagaagctttcagacatctgtggccctgtaacaata
gtatcagggaagaaacggcgtctgacctttattgagtgtaacaatgatatcaataccatg
atagatttggcaaaggttgcagacctggtcctgatgctgatagatgctagttttggcttt
gagatggagacctttgagttcctcaacatctgtcaggttcatggtttccctcgtgtcatg
ggggtgctcacacatttggactccttcaaaaatacgaagtcactcaataagaccaagaaa
cgcctcaaacatcgcttctggactgaagtgtaccagggagccaagctgttttacctgtct
gggatggtgtatggcgagtaccagacacaggaagtgaagaaccttggacgattcatttca
gtcatgaagtttagacccctggtgtggcaaacctctcactcttatgttttggctgatcgg
atggaagatctaactgatccagaggctattcgattagatcctaaatgtgacagaactgtc
tctctgtatggctacctgcgtgggacattcctgaagaacaaaggccaggttcatattcca
ggagtaggagacttctctgtatccgacatcagctttcttcctgacccgtgtccgctgccg
gaggtgctgaagaagagagctctgaatgagaaagagagactgctctacgcgcccatggca
ggggttggaggagtggtgtatgataaagatgcagtgtacattgacatgcctgttggccac
gtcaaacaggaccaggaggaggtgcgtcctgccacagagctgatgcagtctctcatgggc
acacaagccactctggatgtcaagattgctgccagtaaagtttcactgttcacaggaact
gcagcactgactccagaggaagtgcaggagaaaagcggaaaggaaggacctgtggagagc
cgagtgtgggacccggtcactcggagagagaggaggaaagctgtctttagtgacgaagca
gagaaagacaatggagaagaaagtgacgaggaagagtcagatgaagaaggtgaaagcatg
gaggaaaaggcagatgaggaggaggaggaggaagatgatgctgaagaagatgatgatgat
gatgatgatgatgatgatgatgaggaggaggaggaggaggaggaggaggtagaacatggt
gatgatgatgatgatgaggaggaggaggaggatagagctgatgagagcaaactggacaag
agtgaagtggcaagggatggaaggaaaatggtgaaagaggcagctcctcccataaagaga
cagaagctggaggaaaatggaaaagacagcaggcctgtggtagagatgcctgtatttgca
gacagtgatgatgacctagagaagagtgatgaagaagaatcagaagaagaagagatggat
gaggatgaagaagaagaagaggaggaggaggaggaggaggaaatggaggaagagaaacag
aatcctcagaaaagaagctcagcacctccagactctggtcactgctctgaggaggacagt
gatgatgatgatgatgatgatgatgatgatgaaggagaggaagtgcaaggtgatagcgac
tcagaaatggaagaacaattaaatgttaaaccagccttaagaggagctgcaaagctaaag
atggcttctggtgaagaggaggaagaggaggaggaagaggaggaggaggaggaagaggag
atggatgctgaagacgaaggagagctaggatctgaaactgctggagcactacgctggaaa
gaagatttgacccggaaagccatggaagcgcatcagagacgacagcgtgctgcgcctaac
ctacgcaagctggtgtatggcacagtggtggaggtggaggaggaagcaaacagtgaggag
gaggagttgggtgggctgttccgagttagtcggccagagaagagtaagagagtaagagcg
gatgccgtggactgctcacgtttccagcctgatgcaagccatgactgggaccaggaggag
atgttggcctccataagggactgctttgtaactggaaaatgggaaggagataaagatgct
gctactcttcttaaagaggatgatgaaatttatggagattttgaggacctggaaactgga
gaggttcacaaagtaaactctgggaagggagatgaagctgagcagggagatgatgatgag
ggagaggaggaagaggaggaagaagaggaacccaaattagtgaaggttgatgatgaagaa
gctcagaaaaacaagcgcctggaaaagaagaagagactgaaggagaggttcaatgcggaa
tatgatgatggagatgctacctactttgatgacctcaaagaggagatgcagaagcaggct
gagctgaacagggctgagtttgaggacatggatgatgagactcgtgttcagtatgagggc
ttcaggcctggcatgtatgtgcgtgtggaaatccctgcgcttccctgcgagtttgttacc
aactttgacccacattatccagtcatactcggtggcttgggagccagtgaaggcaatata
ggctatctgcagatgcgtttgaagaaacaccgctggtataatcgtatcctgaagacccgt
gacccactcattctgtcgttaggctggagacgtttccagaccattcctctctaccacatt
gaagaccacaatggccgccaccgcctgctcaaatacactcctgagcatatgcactgtggc
gcctctatctggggacctatcacaccccaggggacaggctttctggctgttcagagtgtt
gcagggactcaagcaaatttccgcattgcagccactggagttgttttggacttggacaaa
tctgtgaccattgtgaagaagctgaagctgattggatacccgtataagatttttaagaac
acctgctttgtccagggaatgtttaacacagtgctggaagtcgcaaagtttgagggtgcc
tctatccgcacggtcagcgggatcaaaggtcagattaaaaaggctctgcggacaccgcct
ggaaccttccgagccacatttgaggacagactcctcatgagtgatgttgtgttcctgcgt
tcctggtatccagtctcaattcctcagctgtataacccagtgacatctctgctgatgtct
gttggtcagaaggacacatggatgggtatgaggacccttgggcagcttaaacacgacttg
ggaataaggaaccaacccaaccaagactctctgtacaagccgattgtgagacagaagaga
cacttcaacatcctccatatccccaaagagctgcagaaggctttgccgttcaagagcaaa
cccaaacacctggaggccatgggcaaaaccccccgcgacctgcagagacccgtcgtgatc
cgggagccccacgaaaggaaggtggcagcattgctcgatgcactgagctcagtctactct
cacaagacgaagaaggctcaagcagagcagcgcatgaagcacaaagaattcctgaagaag
aaggagaagcaggaggcagagaagctgaagaggcagaaggaagagcgaaaaaaggtgtac
cgtgctatgggacagaaggagaagaagaaactcaaggccagtctgaagggagcttctaag
gatgactga
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