Pangasianodon hypophthalmus (striped catfish): 113527567
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Entry
113527567 CDS
T05759
Symbol
lrit2
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113527567 (lrit2)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113527567 (lrit2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
ig
LRR_4
Ig_3
I-set
LRR_1
LRR_5
Ig_2
V-set
fn3
LRR_6
LRR_EndoS
LRR_14
UL45
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
113527567
NCBI-ProteinID:
XP_026771312
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
METALGSIPENLPGDFIKIRIENSHLTEIPQRAFYTVSSLESLWLNFNTITLMDIKSLEG
LYNLTELRLEGNKLRTIPWMAFQETPKLKILDLKHNRLDVLPEFALRHLPTLTYLDLSFN
QLTVISPDVFLNWPRYQVQKHSRMKESEANVVLALHDNLWLCDCRLKGLVDFVKSISPPI
ILMNSYLSCSGPKSKAGKFFHEVELRNCLKPESSTPDANVTAALGSNTTLRCFVKARPDA
VVRWSYSLKAIRGFTVSQSQVNEDTIISSLIIPSVRLSDHGLYRCSASNFIGNSSVSIQL
NILFSNASFAKSPSFPLPSVNENIYIDIRIAKQTVYGITIEWYAATENPSETWFTVHFGR
YDSPKKEALYIGPGINKYSVNDLEPATKYEVCVSLKNQSPRPEQCIVFVTGSNTNELEQR
ERLIHIIVIVCAMVLAVPAGMFACTTNTRIGCLDRCTQICSRNREKREAKDSQEHGRQGT
FDSLQAASDEGLYRDSGKERKWRRRSEDKVQKGNSAQLY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgctttaggatcaattcccgagaacctccctggagattttataaaaatcagg
attgagaattcacacctcacagaaataccccaaagggctttttacaccgtcagttccttg
gagtcgctgtggctgaactttaacaccatcacgctgatggacattaagagccttgaagga
ttgtataacctgactgaactccgactggaaggaaataaactgagaacgataccgtggatg
gcctttcaggaaacacccaaactcaaaatcctggatctgaagcacaaccggttggacgtg
ctgccggaattcgcgttacgccaccttcccacactgacctacttagatttatccttcaat
cagcttacggtgatatctccggatgtttttctcaactggcctcgatatcaggtacaaaag
cacagcaggatgaaggagagtgaagctaacgtggtattagcgttacacgataacctctgg
ctgtgcgactgccgactcaaaggcttagtcgactttgtcaaatccatcagtccacccatc
attttgatgaactcgtacctgtcctgttcaggtccaaaatctaaagctgggaagtttttt
catgaggttgagctgaggaattgtctgaagccggaaagttctacgcctgatgctaacgtc
acggcagcgctaggctcgaacacgacgctgaggtgcttcgtgaaggcgaggcctgatgcg
gtggttcgatggagctacagtctaaaagccatcagaggattcacagtttctcagtctcag
gtgaacgaggatacaatcatctcgtctttaataatcccgtcagtccgcttatccgatcac
ggcctctacagatgcagcgccagcaacttcatcgggaattcctccgttagcatccagctc
aacatcttgttctccaacgcttcctttgcgaagtcccccagctttcctctgccctctgtc
aacgaaaacatttacattgatatacgaatcgccaagcagaccgtgtacggtataaccatc
gagtggtacgcggcgacggagaacccttcggaaacatggttcactgtccatttcggtcgc
tacgattctccaaagaaagaagctctgtacatcggcccgggcatcaacaaatactcggtg
aacgatctcgaaccagctacaaagtacgaggtgtgcgtctcgctgaagaatcagtcgcct
cgtcctgagcagtgtatagttttcgtgacagggagcaacacaaacgaactggagcagcgt
gaacgactcatccacatcatcgtgatcgtttgcgccatggtgctagcggttcctgccgga
atgttcgcctgcaccaccaacaccaggatcggctgcttggatcgctgcactcagatctgc
agcagaaatcgggaaaagagagaagcaaaggactcgcaggaacacggcaggcagggaacg
ttcgacagtctccaggcggccagcgacgaaggactctacagagattcgggaaaagagcgg
aaatggagacgacgctcggaagataaagtgcagaaggggaacagcgcacagctctactaa
DBGET
integrated database retrieval system
