Pangasianodon hypophthalmus (striped catfish): 113527575
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Entry
113527575 CDS
T05759
Name
(RefSeq) homeobox protein SIX2-like
KO
K19472
homeobox protein SIX2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113527575
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
113527575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Phage_mat-A
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
113527575
NCBI-ProteinID:
XP_026771324
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MAAVPPTFGFTQEQVACVCEVLQQGGSIERLGRFLWSLPACEHLHKNESVLKAKAVVAFH
RGNFRELYKVLESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPR
TIWDGEETSYCFKEKSRCVLKEWYSHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRD
RAAEAKERENEGANQNGHNPLPSQMTESKSQCESSDDDKSPPGTPDHPSMSPALLLPSSS
GLPPLHSFAPPAGPSASDTHHPHPHPHLHHPHPHQQHSHHEQQHLSMHDGLLNPMAASLV
DLGS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtgccgccgacctttggcttcacgcaggagcaagtggcgtgtgtgtgcgag
gtgctgcagcagggagggagcatcgagcgcctcggccgcttcttgtggtcgctgcccgcc
tgcgagcacctgcacaagaacgagtccgtgctcaaggccaaggccgtggtggctttccac
cgagggaactttcgcgaactctacaaggtgctcgagagccaccagttctcgccgcacaac
cacgccaagctgcagcagctgtggctcaaggcgcactacatcgaggcagagaagctgcgc
gggcgaccgctcggcgccgtgggcaagtaccgggtgcgcaggaagttcccgctgccgcgc
accatctgggacggcgaggagacgagctactgcttcaaggagaaaagtcgctgcgtgctt
aaagaatggtactcccataatccttatccctcacccagagagaaacgcgagctggccgag
gccacagggctcacaaccacgcaggtcagcaactggttcaagaaccgcaggcagagagac
cgcgccgctgaggccaaggagagggaaaacgagggcgcgaatcagaacgggcacaacccg
ctgccgtctcaaatgaccgagagcaaatcccagtgcgagagctcggacgacgataaatct
ccgccagggaccccagatcacccgtccatgagtcctgctctgctgctgccctccagctcg
ggcctgccgccgctgcacagcttcgcgcctccggccggacccagcgcctccgacacgcac
catcctcatcctcatcctcatcttcatcatcctcaccctcatcagcagcacagccaccat
gagcagcagcatctgtccatgcacgacggcctcctcaaccccatggcggccagcctggtg
gacctgggctcctaa
DBGET
integrated database retrieval system
