Pangasianodon hypophthalmus (striped catfish): 113527884
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Entry
113527884 CDS
T05759
Symbol
ntn1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113527884 (ntn1)
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Axon guidance molecules
113527884 (ntn1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
113527884
NCBI-ProteinID:
XP_026771834
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MLRLFVAWSTLVALCVMVEGARGGGGGGYGMSMFAAQSSPPDPCYDENGNPRRCIPDFVN
AAFGKDVRASSTCGTPAARYCVVSEKGDERTRDCHTCDATDPKKAHPAAYLTDLNNPHNL
TCWQSESYVQHPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWTPFQFY
STQCKKMYNRPSRAVITKQNEQEAICTDSHTDMQPLAGGLIAFSTLDGRPSAHDFDNSPV
LQDWVTATDIKVTFSRLHTFGDENEDDSELARDSYFYSVSDLQVGGRCKCNGHASKCVRD
RDGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELY
KLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPISHRRACKACDCHPVGAAGKTCN
QTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTATYTSSEEPSDCESHCK
ASKGKLKVTMKKYCKKDFAVQVHVLKGDKAGEWWKFTINIISVYKQGEHRIRRGDQLLWV
RAKDVACKCPKIKPGRKYLLLGSDDEDSRGQSGVVADKASLLVPWKDQWARRLRKFQQRD
KRGKC
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggctgttcgtggcttggagcactctggtggcgctgtgcgtgatggtggaggga
gcgcgcggcggcggcggcggcggttacggcatgagcatgttcgcggcgcagtcctcgccc
cccgacccgtgctacgatgagaacggcaaccctcgccgctgcatccccgacttcgtgaac
gcggctttcggtaaggacgtgcgcgcgtccagcacgtgcggcacaccggcggcgcgctac
tgcgtggtgagcgagaagggcgacgagaggacgcgcgactgccacacgtgcgacgcgaca
gacccgaagaaggcgcatccggccgcgtacctcaccgacctcaacaacccgcacaacctc
acgtgctggcagtccgagagctacgtgcagcacccgcagaacgtcaccctcacgctctcg
ctgggcaaaaagttcgaggtgacctacgtgagcctgcagttctgctcgccgcggcccgag
tccatggccatctacaagtcgatggactacggcaagacatggacgccgttccagttctac
tcgacgcagtgcaagaagatgtacaacagaccgagtcgcgcggtcatcaccaagcagaac
gagcaggaggccatctgcacggactcgcacacggacatgcagccgctcgcgggcggcctc
atcgcgttcagcactctggacggcaggccgtcggcgcatgacttcgataattcccccgtg
ctgcaggactgggtcacggccactgacatcaaggtgacgttcagccgcttgcacacgttc
ggcgacgagaacgaggacgactcggagctggccagggactcgtacttctactccgtgtct
gatctgcaggtgggtggccgctgcaagtgtaacgggcacgcgtcgaagtgtgtgcgcgac
cgcgacggcaacctggtgtgtgagtgcaaacacaacactgcgggacccgagtgcgacagg
tgcaaacccttccactatgaccggccatggcagcgcgctacagccagagaggccaacgag
tgcgtcgcttgtcactgtaacctacatgcacgtcgctgtcggttcaatatggagctgtat
aagctgtcaggacgcaggagcggaggagtttgtctcaactgcagacacaacaccgccgga
cgccactgtcactactgcaaagagggctactacagagacatgactaagcccatctcccac
agacgtgcctgcaaagcatgtgactgtcacccagtcggtgctgcaggtaagacctgtaac
cagaccacaggccagtgtccgtgcaaggatggtgtgactggtattacctgcaaccgctgt
gctaaaggctaccagcagagtcgctcacccatcgccccatgcatcaagattccagtcgcg
tcccccactgcaacgtacaccagttctgaagaaccatcagactgtgaatcccattgcaag
gcctccaaggggaaactgaaggtcaccatgaagaaatattgcaagaaggactttgctgtc
caagtgcacgtgctgaagggtgacaaggcaggcgagtggtggaagttcaccattaacatc
atctcggtgtacaagcagggcgagcaccgcatccgacgtggcgaccagctactgtgggtg
cgcgccaaggacgtggcctgcaagtgccccaagatcaagccaggcaggaagtacctgttg
ctgggctcagacgacgaggactcgcgtggccaaagcggtgttgtggccgacaaagccagc
ctgctcgtcccctggaaggaccagtgggcccgtcgcctccgcaagttccagcagcgtgac
aagaggggcaagtgctaa
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