Pangasianodon hypophthalmus (striped catfish): 113528014
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Entry
113528014 CDS
T05759
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
phyp04517
IgSF CAM signaling
phyp04530
Tight junction
phyp04810
Regulation of actin cytoskeleton
phyp05100
Bacterial invasion of epithelial cells
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113528014
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113528014
09144 Cellular community - eukaryotes
04530 Tight junction
113528014
09142 Cell motility
04810 Regulation of actin cytoskeleton
113528014
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113528014
05100 Bacterial invasion of epithelial cells
113528014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113528014
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113528014
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Arp2/3 complex
113528014
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
113528014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_2nd
Rax2
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
113528014
NCBI-ProteinID:
XP_026772040
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MSVYSFGLEPLSCHAWNKDRTQIAISPNSSVVNIYQKKGKEWSKIHELKEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLI
SVCYFEKENDWWLSKHIKKGICSTVLSLDWHPNNILLAAGSSDLHCRVFSTYIKEIEDKP
GPTPWGVKMPFGEMLLENKDCGGWVHSVAFSPSGDTLAWVSHNSSISVADATQGKEVTQL
TTEHLPLLSVLYISETEIVAAGHDCCPYHFSYKGPGKLEFVRKLGLAKQTSKNSMSAMQH
FRNLDKKATTDEEDNELSTLHQNSITQLCVVEGDRAKVEKFSSVSLDGAMVLWEFKP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtacagctttgggttggagcctctgtcctgtcacgcctggaataaagaccga
actcagatcgccatcagccccaacagcagtgtggtgaacatttaccagaagaaggggaag
gaatggagcaaaatccatgagctgaaggagcacagcgggcgaatcacgggaatcgactgg
gccccagagtcgaaccgtatcgtgacgtgtgcctcagacagaaacgcctacgtgtggact
ctgaaggacggcgtgtggaagccgactctcgtcctcgttcgcatcaacagagccgccacg
tgtgtcaagtggtcacctctggagaacaagtttgctcttggaagtggagctaaactcatc
tcagtgtgttactttgagaaagagaacgattggtggctcagtaagcacataaagaaaggg
atctgctcgaccgtgctcagtctggactggcatcccaataacatcctgctggcagccggg
tcatccgatctccactgcagggttttctccacgtatatcaaggaaattgaggacaagcct
ggtccgacaccatggggagtcaagatgccgtttggtgaaatgcttctggagaataaagac
tgtggtggatgggtacacagcgttgccttctctccgtctggagacacgctggcctgggtc
agccacaacagctccatcagcgtcgccgatgccacgcagggcaaagaggttacacagctg
actacagaacatcttcctctgctcagtgtgctgtacatcagcgagacagagattgtggcc
gcgggccatgactgctgtccctaccacttctcctacaaggggcccggcaagctggaattt
gtgcgaaagctcggactcgccaagcagacgtcaaaaaacagcatgtcggccatgcagcac
ttccgcaacctggacaaaaaggccacgaccgacgaggaggataacgagctgagcactcta
caccagaacagcatcacccagctgtgtgtggtggagggagacagggccaaagtggaaaag
ttcagtagcgtcagtctggatggagccatggtgctctgggaattcaagccttga
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integrated database retrieval system
